RNA–Protein interactions for RNA: ENST00000510638.1

NFKB1-209, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 4

Gene NFKB1, Length 628 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-209ENST00000510638 CAPN15O75808 1086 aa11.14□□□□□ -0.63
NFKB1-209ENST00000510638 SNRPA1P09661 255 aaKnown RBP11.14□□□□□ -0.63
NFKB1-209ENST00000510638 HMGB2P26583 209 aaKnown RBP11.14□□□□□ -0.63
NFKB1-209ENST00000510638 TWISTNBQ3B726 338 aaPredicted RBP11.14□□□□□ -0.63
NFKB1-209ENST00000510638 ATG3Q9NT62 314 aa11.14□□□□□ -0.63
NFKB1-209ENST00000510638 ASAP1Q9ULH1 1129 aa11.14□□□□□ -0.63
NFKB1-209ENST00000510638 PAPPAQ13219 1627 aa11.13□□□□□ -0.63
NFKB1-209ENST00000510638 ELL2O00472 640 aaPredicted RBP11.13□□□□□ -0.63
NFKB1-209ENST00000510638 KCNQ3O43525 872 aa11.13□□□□□ -0.63
NFKB1-209ENST00000510638 HOXD11P31277 338 aaPredicted RBP11.13□□□□□ -0.63
NFKB1-209ENST00000510638 TNS4Q8IZW8 715 aa11.13□□□□□ -0.63
NFKB1-209ENST00000510638 C8orf58Q8NAV2 365 aa11.13□□□□□ -0.63
NFKB1-209ENST00000510638 ZNF496Q96IT1 587 aaPredicted RBP11.13□□□□□ -0.63
NFKB1-209ENST00000510638 RBM42Q9BTD8 480 aaKnown RBP11.13□□□□□ -0.63
NFKB1-209ENST00000510638 TEX13AQ9BXU3 409 aaPredicted RBP11.13□□□□□ -0.63
NFKB1-209ENST00000510638 PALLDQ8WX93 1383 aa11.13□□□□□ -0.63
NFKB1-209ENST00000510638 SLC15A2Q16348 729 aa11.12□□□□□ -0.63
NFKB1-209ENST00000510638 VSIG10Q8N0Z9 540 aa11.12□□□□□ -0.63
NFKB1-209ENST00000510638 RCAN3Q9UKA8 241 aa11.12□□□□□ -0.63
NFKB1-209ENST00000510638 HEG1Q9ULI3 1381 aa11.12□□□□□ -0.63
NFKB1-209ENST00000510638 STARD3NLO95772 234 aa11.11□□□□□ -0.63
NFKB1-209ENST00000510638 COL13A1Q5TAT6 717 aaPredicted RBP11.11□□□□□ -0.63
NFKB1-209ENST00000510638 HDGFL1Q5TGJ6 251 aa11.11□□□□□ -0.63
NFKB1-209ENST00000510638 CCDC30Q5VVM6 783 aa11.11□□□□□ -0.63
NFKB1-209ENST00000510638 STK31Q9BXU1 1019 aa11.11□□□□□ -0.63
NFKB1-209ENST00000510638 ADCY9O60503 1353 aa11.11□□□□□ -0.63
NFKB1-209ENST00000510638 TUBGCP6Q96RT7 1819 aa11.11□□□□□ -0.63
NFKB1-209ENST00000510638 DLG5Q8TDM6 1919 aa11.11□□□□□ -0.63
NFKB1-209ENST00000510638 SCN11AQ9UI33 1791 aa11.11□□□□□ -0.63
NFKB1-209ENST00000510638 LOC102724428A0A0B4J2F2 783 aa11.1□□□□□ -0.63
NFKB1-209ENST00000510638 VAMP4O75379 141 aa11.1□□□□□ -0.63
NFKB1-209ENST00000510638 EIF2S2P20042 333 aaKnown RBP11.1□□□□□ -0.63
NFKB1-209ENST00000510638 SIK1P57059 783 aa11.1□□□□□ -0.63
NFKB1-209ENST00000510638 KRT24Q2M2I5 525 aa11.1□□□□□ -0.63
NFKB1-209ENST00000510638 ALDH1L2Q3SY69 923 aa11.1□□□□□ -0.63
NFKB1-209ENST00000510638 TSPYL6Q8N831 410 aa11.1□□□□□ -0.63
NFKB1-209ENST00000510638 NHSQ6T4R5 1651 aa11.09□□□□□ -0.63
NFKB1-209ENST00000510638 ATP6V1AP38606 617 aa11.09□□□□□ -0.63
NFKB1-209ENST00000510638 DNAJC5GQ8N7S2 189 aa11.09□□□□□ -0.63
NFKB1-209ENST00000510638 SMC4Q9NTJ3 1288 aa11.09□□□□□ -0.63
NFKB1-209ENST00000510638 TOGARAM1Q9Y4F4 1720 aa11.09□□□□□ -0.63
NFKB1-209ENST00000510638 RARSP54136 660 aaKnown RBP11.08□□□□□ -0.64
NFKB1-209ENST00000510638 SLC27A3Q5K4L6 730 aa11.08□□□□□ -0.64
NFKB1-209ENST00000510638 PTF1AQ7RTS3 328 aa11.08□□□□□ -0.64
NFKB1-209ENST00000510638 NPM2Q86SE8 214 aaKnown RBP11.08□□□□□ -0.64
NFKB1-209ENST00000510638 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.08□□□□□ -0.64
NFKB1-209ENST00000510638 DBF4Q9UBU7 674 aaPredicted RBP11.08□□□□□ -0.64
NFKB1-209ENST00000510638 CCNL1Q9UK58 526 aaPredicted RBP11.08□□□□□ -0.64
NFKB1-209ENST00000510638 DOT1LQ8TEK3 1739 aa11.08□□□□□ -0.64
NFKB1-209ENST00000510638 ERBB4Q15303 1308 aa11.08□□□□□ -0.64
NFKB1-209ENST00000510638 KIF16BQ96L93 1317 aa11.08□□□□□ -0.64
NFKB1-209ENST00000510638 CANXP27824 592 aaKnown RBP11.07□□□□□ -0.64
NFKB1-209ENST00000510638 DNAJC10Q8IXB1 793 aa11.07□□□□□ -0.64
NFKB1-209ENST00000510638 PELP1Q8IZL8 1130 aaKnown RBP11.07□□□□□ -0.64
NFKB1-209ENST00000510638 PROM2Q8N271 834 aa11.07□□□□□ -0.64
NFKB1-209ENST00000510638 SSH1Q8WYL5 1049 aa11.07□□□□□ -0.64
NFKB1-209ENST00000510638 NECTIN2Q92692 538 aa11.07□□□□□ -0.64
NFKB1-209ENST00000510638 KCPQ6ZWJ8 1503 aa11.07□□□□□ -0.64
NFKB1-209ENST00000510638 IPO8O15397 1037 aaKnown RBP11.06□□□□□ -0.64
NFKB1-209ENST00000510638 TXNRD1Q16881 649 aa11.06□□□□□ -0.64
NFKB1-209ENST00000510638 JMYQ8N9B5 988 aa11.06□□□□□ -0.64
NFKB1-209ENST00000510638 SLC16A10Q8TF71 515 aa11.06□□□□□ -0.64
NFKB1-209ENST00000510638 RNF39Q9H2S5 420 aa11.06□□□□□ -0.64
NFKB1-209ENST00000510638 HYPKQ9NX55 129 aa11.06□□□□□ -0.64
NFKB1-209ENST00000510638 USP16Q9Y5T5 823 aa11.06□□□□□ -0.64
NFKB1-209ENST00000510638 BTAF1O14981 1849 aa11.06□□□□□ -0.64
NFKB1-209ENST00000510638 PRAMEF22A3QJZ6 481 aa11.05□□□□□ -0.64
NFKB1-209ENST00000510638 TCERG1O14776 1098 aaKnown RBP11.05□□□□□ -0.64
NFKB1-209ENST00000510638 SLC4A2P04920 1241 aa11.05□□□□□ -0.64
NFKB1-209ENST00000510638 POLD1P28340 1107 aa11.05□□□□□ -0.64
NFKB1-209ENST00000510638 BRPF1P55201 1214 aaPredicted RBP11.05□□□□□ -0.64
NFKB1-209ENST00000510638 CNKSR2Q8WXI2 1034 aa11.05□□□□□ -0.64
NFKB1-209ENST00000510638 SLC4A9Q96Q91 983 aa11.05□□□□□ -0.64
NFKB1-209ENST00000510638 BCL2L13Q9BXK5 485 aa11.05□□□□□ -0.64
NFKB1-209ENST00000510638 DDX21Q9NR30 783 aaKnown RBP eCLIP11.05□□□□□ -0.64
NFKB1-209ENST00000510638 CHPF2Q9P2E5 772 aa11.05□□□□□ -0.64
NFKB1-209ENST00000510638 SIPA1L3O60292 1781 aaPredicted RBP11.05□□□□□ -0.64
NFKB1-209ENST00000510638 KDM3BQ7LBC6 1761 aa11.05□□□□□ -0.64
NFKB1-209ENST00000510638 CYP19A1P11511 503 aaPredicted RBP11.04□□□□□ -0.64
NFKB1-209ENST00000510638 MS4A1P11836 297 aa11.04□□□□□ -0.64
NFKB1-209ENST00000510638 ITPK1Q13572 414 aa11.04□□□□□ -0.64
NFKB1-209ENST00000510638 FRAT1Q92837 279 aaPredicted RBP11.04□□□□□ -0.64
NFKB1-209ENST00000510638 CCDC87Q9NVE4 849 aa11.04□□□□□ -0.64
NFKB1-209ENST00000510638 PCNTO95613 3336 aa11.04□□□□□ -0.64
NFKB1-209ENST00000510638 BCAR3O75815 825 aa11.03□□□□□ -0.64
NFKB1-209ENST00000510638 DDX58O95786 925 aaKnown RBP11.03□□□□□ -0.64
NFKB1-209ENST00000510638 CRKLP46109 303 aaKnown RBP11.03□□□□□ -0.64
NFKB1-209ENST00000510638 RC3H1Q5TC82 1133 aaKnown RBP11.03□□□□□ -0.64
NFKB1-209ENST00000510638 MRPL50Q8N5N7 158 aaKnown RBP11.03□□□□□ -0.64
NFKB1-209ENST00000510638 PTPRCP08575 1304 aa11.03□□□□□ -0.64
NFKB1-209ENST00000510638 A1BGP04217 495 aa11.02□□□□□ -0.65
NFKB1-209ENST00000510638 MYL6BP14649 208 aa11.02□□□□□ -0.65
NFKB1-209ENST00000510638 FLIIQ13045 1269 aa11.02□□□□□ -0.65
NFKB1-209ENST00000510638 ZKSCAN2Q63HK3 967 aa11.02□□□□□ -0.65
NFKB1-209ENST00000510638 LINC00116Q8NCU8 138 aa11.02□□□□□ -0.65
NFKB1-209ENST00000510638 ARHGAP45Q92619 1136 aa11.02□□□□□ -0.65
NFKB1-209ENST00000510638 AK7Q96M32 723 aa11.02□□□□□ -0.65
NFKB1-209ENST00000510638 API5Q9BZZ5 524 aaKnown RBP11.02□□□□□ -0.65
NFKB1-209ENST00000510638 SUPT16HQ9Y5B9 1047 aaKnown RBP11.02□□□□□ -0.65
NFKB1-209ENST00000510638 CNTNAP4Q9C0A0 1308 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms