RNA–Protein interactions for RNA: ENST00000510195.1

SNF8-208, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-208ENST00000510195 SIPA1L3O60292 1781 aaPredicted RBP35.61■■■■□ 3.29
SNF8-208ENST00000510195 C1QTNF8P60827 252 aa35.6■■■■□ 3.29
SNF8-208ENST00000510195 USPL1Q5W0Q7 1092 aa35.6■■■■□ 3.29
SNF8-208ENST00000510195 ZNF496Q96IT1 587 aaPredicted RBP35.6■■■■□ 3.29
SNF8-208ENST00000510195 WWC3Q9ULE0 1092 aa35.6■■■■□ 3.29
SNF8-208ENST00000510195 HEG1Q9ULI3 1381 aa35.6■■■■□ 3.29
SNF8-208ENST00000510195 N4BP2Q86UW6 1770 aaPredicted RBP35.59■■■■□ 3.29
SNF8-208ENST00000510195 GIGYF1O75420 1035 aaPredicted RBP35.59■■■■□ 3.29
SNF8-208ENST00000510195 DDR1Q08345 913 aa35.59■■■■□ 3.29
SNF8-208ENST00000510195 DPEP1P16444 411 aa35.58■■■■□ 3.29
SNF8-208ENST00000510195 ADCY9O60503 1353 aa35.58■■■■□ 3.29
SNF8-208ENST00000510195 POLRMTO00411 1230 aaKnown RBP35.57■■■■□ 3.28
SNF8-208ENST00000510195 FMNL2Q96PY5 1086 aa35.57■■■■□ 3.28
SNF8-208ENST00000510195 BCS1LQ9Y276 419 aa35.56■■■■□ 3.28
SNF8-208ENST00000510195 ATP10DQ9P241 1426 aa35.56■■■■□ 3.28
SNF8-208ENST00000510195 A0A087WZG4 1122 aa35.55■■■■□ 3.28
SNF8-208ENST00000510195 HTATSF1O43719 755 aaKnown RBP35.55■■■■□ 3.28
SNF8-208ENST00000510195 RTF1Q92541 710 aaKnown RBP35.55■■■■□ 3.28
SNF8-208ENST00000510195 BTBD11A6QL63 1104 aa35.54■■■■□ 3.28
SNF8-208ENST00000510195 CANXP27824 592 aaKnown RBP35.54■■■■□ 3.28
SNF8-208ENST00000510195 EIF5P55010 431 aaKnown RBP35.54■■■■□ 3.28
SNF8-208ENST00000510195 KCNA3P22001 575 aa35.53■■■■□ 3.28
SNF8-208ENST00000510195 PIM2Q9P1W9 311 aa35.53■■■■□ 3.28
SNF8-208ENST00000510195 BRCA1P38398 1863 aaKnown RBP35.52■■■■□ 3.28
SNF8-208ENST00000510195 NFIXQ14938 502 aa35.5■■■■□ 3.27
SNF8-208ENST00000510195 IL6STP40189 918 aaPredicted RBP35.49■■■■□ 3.27
SNF8-208ENST00000510195 BCL2L12Q9HB09 334 aa35.49■■■■□ 3.27
SNF8-208ENST00000510195 GPBP1L1Q9HC44 474 aaPredicted RBP35.49■■■■□ 3.27
SNF8-208ENST00000510195 NEFMP07197 916 aa35.46■■■■□ 3.27
SNF8-208ENST00000510195 DALRD3Q5D0E6 543 aaKnown RBP35.45■■■■□ 3.27
SNF8-208ENST00000510195 ARFGEF1Q9Y6D6 1849 aa35.44■■■■□ 3.26
SNF8-208ENST00000510195 NRXN2Q9P2S2 1712 aa35.44■■■■□ 3.26
SNF8-208ENST00000510195 SERPINB2P05120 415 aa35.44■■■■□ 3.26
SNF8-208ENST00000510195 ARHGAP27Q6ZUM4 889 aa35.44■■■■□ 3.26
SNF8-208ENST00000510195 MCM10Q7L590 875 aa35.44■■■■□ 3.26
SNF8-208ENST00000510195 KCNQ3O43525 872 aa35.43■■■■□ 3.26
SNF8-208ENST00000510195 NPM2Q86SE8 214 aaKnown RBP35.43■■■■□ 3.26
SNF8-208ENST00000510195 AFDNP55196 1824 aaKnown RBP35.41■■■■□ 3.26
SNF8-208ENST00000510195 PNNQ9H307 717 aaKnown RBP35.41■■■■□ 3.26
SNF8-208ENST00000510195 A1BGP04217 495 aa35.39■■■■□ 3.26
SNF8-208ENST00000510195 SNRPA1P09661 255 aaKnown RBP35.39■■■■□ 3.26
SNF8-208ENST00000510195 CHRNA5P30532 468 aa35.39■■■■□ 3.26
SNF8-208ENST00000510195 TAF7Q15545 349 aaPredicted RBP35.38■■■■□ 3.25
SNF8-208ENST00000510195 RALBP1Q15311 655 aa35.37■■■■□ 3.25
SNF8-208ENST00000510195 USP16Q9Y5T5 823 aa35.37■■■■□ 3.25
SNF8-208ENST00000510195 SENP3-EIF4A1A0A087X0R7 540 aa35.36■■■■□ 3.25
SNF8-208ENST00000510195 DCTN1Q14203 1278 aa35.36■■■■□ 3.25
SNF8-208ENST00000510195 PLEKHF1Q96S99 279 aa35.36■■■■□ 3.25
SNF8-208ENST00000510195 TBC1D2BQ9UPU7 963 aa35.36■■■■□ 3.25
SNF8-208ENST00000510195 ZNF330Q9Y3S2 320 aaPredicted RBP35.36■■■■□ 3.25
SNF8-208ENST00000510195 ZNF526Q8TF50 670 aaPredicted RBP35.35■■■■□ 3.25
SNF8-208ENST00000510195 SCN7AQ01118 1682 aa35.34■■■■□ 3.25
SNF8-208ENST00000510195 TBC1D9BQ66K14 1250 aa35.34■■■■□ 3.25
SNF8-208ENST00000510195 BICDL1Q6ZP65 573 aa35.33■■■■□ 3.25
SNF8-208ENST00000510195 PDZRN3Q9UPQ7 1066 aa35.33■■■■□ 3.25
SNF8-208ENST00000510195 PNISRQ8TF01 805 aaKnown RBP35.32■■■■□ 3.24
SNF8-208ENST00000510195 CARMIL3Q8ND23 1372 aa35.31■■■■□ 3.24
SNF8-208ENST00000510195 CAMTA2O94983 1202 aa35.31■■■■□ 3.24
SNF8-208ENST00000510195 NFE2L2Q16236 605 aa35.3■■■■□ 3.24
SNF8-208ENST00000510195 DZIP3Q86Y13 1208 aaKnown RBP35.3■■■■□ 3.24
SNF8-208ENST00000510195 H0YIN7 160 aa35.29■■■■□ 3.24
SNF8-208ENST00000510195 CLEC4GQ6UXB4 293 aa35.28■■■■□ 3.24
SNF8-208ENST00000510195 SETDB2Q96T68 719 aa35.28■■■■□ 3.24
SNF8-208ENST00000510195 DLG5Q8TDM6 1919 aa35.28■■■■□ 3.24
SNF8-208ENST00000510195 PRAMEF22A3QJZ6 481 aa35.27■■■■□ 3.24
SNF8-208ENST00000510195 RGL2O15211 777 aa35.27■■■■□ 3.24
SNF8-208ENST00000510195 C9orf131Q5VYM1 1079 aa35.27■■■■□ 3.24
SNF8-208ENST00000510195 TTLL6Q8N841 843 aa35.27■■■■□ 3.24
SNF8-208ENST00000510195 BRIP1Q9BX63 1249 aa35.27■■■■□ 3.24
SNF8-208ENST00000510195 DLEC1Q9Y238 1755 aa35.27■■■■□ 3.24
SNF8-208ENST00000510195 MAPK8IP3Q9UPT6 1336 aa35.27■■■■□ 3.24
SNF8-208ENST00000510195 PDE6BP35913 854 aa35.26■■■■□ 3.24
SNF8-208ENST00000510195 C2CD5Q86YS7 1000 aa35.26■■■■□ 3.24
SNF8-208ENST00000510195 PRR5LQ6MZQ0 368 aa35.24■■■■□ 3.23
SNF8-208ENST00000510195 KIF3CO14782 793 aa35.23■■■■□ 3.23
SNF8-208ENST00000510195 ZNF652Q9Y2D9 606 aa35.23■■■■□ 3.23
SNF8-208ENST00000510195 BCORQ6W2J9 1755 aa35.23■■■■□ 3.23
SNF8-208ENST00000510195 MIS18AQ9NYP9 233 aa35.22■■■■□ 3.23
SNF8-208ENST00000510195 DDX10Q13206 875 aaKnown RBP35.21■■■■□ 3.23
SNF8-208ENST00000510195 CEP350Q5VT06 3117 aa35.21■■■■□ 3.23
SNF8-208ENST00000510195 PIP4K2AP48426 406 aaPredicted RBP35.2■■■■□ 3.23
SNF8-208ENST00000510195 CNBD1Q8NA66 436 aa35.2■■■■□ 3.23
SNF8-208ENST00000510195 NBPF26B4DH59 902 aa35.19■■■■□ 3.22
SNF8-208ENST00000510195 NBPF10Q6P3W6 841 aaKnown RBP35.19■■■■□ 3.22
SNF8-208ENST00000510195 NBPF15Q8N660 670 aa35.19■■■■□ 3.22
SNF8-208ENST00000510195 RNF181Q9P0P0 153 aa35.19■■■■□ 3.22
SNF8-208ENST00000510195 SBF1O95248 1867 aa35.18■■■■□ 3.22
SNF8-208ENST00000510195 KDM3BQ7LBC6 1761 aa35.18■■■■□ 3.22
SNF8-208ENST00000510195 MYBBP1AQ9BQG0 1328 aaKnown RBP35.17■■■■□ 3.22
SNF8-208ENST00000510195 NPHP1O15259 732 aa35.17■■■■□ 3.22
SNF8-208ENST00000510195 ST5P78524 1137 aa35.17■■■■□ 3.22
SNF8-208ENST00000510195 ANKRD31Q8N7Z5 1873 aa35.17■■■■□ 3.22
SNF8-208ENST00000510195 ZC3H4Q9UPT8 1303 aaKnown RBP35.16■■■■□ 3.22
SNF8-208ENST00000510195 EIF4A1P60842 406 aaKnown RBP35.16■■■■□ 3.22
SNF8-208ENST00000510195 LAMB4A4D0S4 1761 aa35.15■■■■□ 3.22
SNF8-208ENST00000510195 KDM2BQ8NHM5 1336 aa35.13■■■■□ 3.21
SNF8-208ENST00000510195 TOMM70O94826 608 aa35.13■■■■□ 3.21
SNF8-208ENST00000510195 ZNF622Q969S3 477 aaKnown RBP eCLIP35.13■■■■□ 3.21
SNF8-208ENST00000510195 HSPA6P17066 643 aa35.12■■■■□ 3.21
SNF8-208ENST00000510195 LMNB1P20700 586 aa35.12■■■■□ 3.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms