RNA–Protein interactions for RNA: ENST00000509860.1

PRDM16-205, Transcript of PR/SET domain 16, humanhuman

TSL 5

Gene PRDM16, Length 3,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-205ENST00000509860 USP44Q9H0E7 712 aa15.68■□□□□ 0.1
PRDM16-205ENST00000509860 NKX1-1Q15270 411 aaPredicted RBP15.68■□□□□ 0.1
PRDM16-205ENST00000509860 ZNF496Q96IT1 587 aaPredicted RBP15.68■□□□□ 0.1
PRDM16-205ENST00000509860 STRN4Q9NRL3 753 aa15.67■□□□□ 0.1
PRDM16-205ENST00000509860 BEND3Q5T5X7 828 aa15.67■□□□□ 0.1
PRDM16-205ENST00000509860 GCC1Q96CN9 775 aa15.67■□□□□ 0.1
PRDM16-205ENST00000509860 BTG4Q9NY30 223 aa15.66■□□□□ 0.1
PRDM16-205ENST00000509860 PCDH11XQ9BZA7 1347 aa15.66■□□□□ 0.1
PRDM16-205ENST00000509860 PCDH11YQ9BZA8 1340 aa15.66■□□□□ 0.1
PRDM16-205ENST00000509860 AFDNP55196 1824 aaKnown RBP15.66■□□□□ 0.1
PRDM16-205ENST00000509860 TJP1Q07157 1748 aa15.66■□□□□ 0.1
PRDM16-205ENST00000509860 ZCRB1Q8TBF4 217 aaKnown RBP15.65■□□□□ 0.1
PRDM16-205ENST00000509860 DOT1LQ8TEK3 1739 aa15.65■□□□□ 0.1
PRDM16-205ENST00000509860 NWD2Q9ULI1 1742 aa15.65■□□□□ 0.1
PRDM16-205ENST00000509860 PNMA6EA0A0J9YXQ4 647 aa15.65■□□□□ 0.1
PRDM16-205ENST00000509860 IL2RBP14784 551 aa15.65■□□□□ 0.1
PRDM16-205ENST00000509860 CHMP4BQ9H444 224 aaKnown RBP15.65■□□□□ 0.1
PRDM16-205ENST00000509860 LRP6O75581 1613 aa15.65■□□□□ 0.1
PRDM16-205ENST00000509860 PI4KAP2A4QPH2 592 aa15.64■□□□□ 0.09
PRDM16-205ENST00000509860 PI4KAP1Q8N8J0 262 aa15.64■□□□□ 0.09
PRDM16-205ENST00000509860 OTUD7AQ8TE49 926 aaPredicted RBP15.64■□□□□ 0.09
PRDM16-205ENST00000509860 ANKRD45Q5TZF3 282 aa15.64■□□□□ 0.09
PRDM16-205ENST00000509860 C16orf71Q8IYS4 520 aaPredicted RBP15.64■□□□□ 0.09
PRDM16-205ENST00000509860 VSIG10Q8N0Z9 540 aa15.64■□□□□ 0.09
PRDM16-205ENST00000509860 RPAP2Q8IXW5 612 aaPredicted RBP15.64■□□□□ 0.09
PRDM16-205ENST00000509860 IPO9Q96P70 1041 aaKnown RBP15.64■□□□□ 0.09
PRDM16-205ENST00000509860 DBF4Q9UBU7 674 aaPredicted RBP15.63■□□□□ 0.09
PRDM16-205ENST00000509860 USP16Q9Y5T5 823 aa15.63■□□□□ 0.09
PRDM16-205ENST00000509860 NBPF7P0C2Y1 421 aaPredicted RBP15.63■□□□□ 0.09
PRDM16-205ENST00000509860 ZMYND15Q9H091 742 aa15.62■□□□□ 0.09
PRDM16-205ENST00000509860 LRRFIP2Q9Y608 721 aaKnown RBP15.62■□□□□ 0.09
PRDM16-205ENST00000509860 GSPT1P15170 499 aaKnown RBP15.61■□□□□ 0.09
PRDM16-205ENST00000509860 PIP4K2AP48426 406 aaPredicted RBP15.61■□□□□ 0.09
PRDM16-205ENST00000509860 SMARCA5O60264 1052 aaPredicted RBP15.61■□□□□ 0.09
PRDM16-205ENST00000509860 DNAAF4Q8WXU2 420 aa15.61■□□□□ 0.09
PRDM16-205ENST00000509860 PLEKHM2Q8IWE5 1019 aa15.6■□□□□ 0.09
PRDM16-205ENST00000509860 DDX21Q9NR30 783 aaKnown RBP eCLIP15.6■□□□□ 0.09
PRDM16-205ENST00000509860 SALL3Q9BXA9 1300 aa15.6■□□□□ 0.09
PRDM16-205ENST00000509860 GNAI2P04899 355 aa15.6■□□□□ 0.09
PRDM16-205ENST00000509860 MAP3K2Q9Y2U5 619 aa15.6■□□□□ 0.09
PRDM16-205ENST00000509860 USP35Q9P2H5 1018 aa15.6■□□□□ 0.09
PRDM16-205ENST00000509860 SLIT2O94813 1529 aa15.59■□□□□ 0.09
PRDM16-205ENST00000509860 CABP4P57796 275 aa15.59■□□□□ 0.09
PRDM16-205ENST00000509860 HSP90AB1P08238 724 aaKnown RBP15.59■□□□□ 0.09
PRDM16-205ENST00000509860 KAZALD1Q96I82 304 aa15.59■□□□□ 0.09
PRDM16-205ENST00000509860 ERVV-2B6SEH9 535 aa15.58■□□□□ 0.09
PRDM16-205ENST00000509860 IGKV5-2P06315 115 aa15.58■□□□□ 0.09
PRDM16-205ENST00000509860 ATP8B2P98198 1209 aa15.58■□□□□ 0.09
PRDM16-205ENST00000509860 NBPF26B4DH59 902 aa15.58■□□□□ 0.08
PRDM16-205ENST00000509860 EVA1CP58658 441 aa15.58■□□□□ 0.08
PRDM16-205ENST00000509860 CWF19L2Q2TBE0 894 aaKnown RBP15.58■□□□□ 0.08
PRDM16-205ENST00000509860 NBPF14Q5TI25 921 aa15.58■□□□□ 0.08
PRDM16-205ENST00000509860 NBPF10Q6P3W6 841 aaKnown RBP15.58■□□□□ 0.08
PRDM16-205ENST00000509860 KSR2Q6VAB6 950 aa15.58■□□□□ 0.08
PRDM16-205ENST00000509860 NBPF15Q8N660 670 aa15.58■□□□□ 0.08
PRDM16-205ENST00000509860 DDX54Q8TDD1 881 aaKnown RBP15.58■□□□□ 0.08
PRDM16-205ENST00000509860 PDE4CQ08493 712 aa15.58■□□□□ 0.08
PRDM16-205ENST00000509860 POLA2Q14181 598 aa15.58■□□□□ 0.08
PRDM16-205ENST00000509860 SRCIN1Q9C0H9 1055 aa15.58■□□□□ 0.08
PRDM16-205ENST00000509860 IBTKQ9P2D0 1353 aaPredicted RBP15.57■□□□□ 0.08
PRDM16-205ENST00000509860 ANP32AP39687 249 aaKnown RBP15.57■□□□□ 0.08
PRDM16-205ENST00000509860 HYPKQ9NX55 129 aa15.57■□□□□ 0.08
PRDM16-205ENST00000509860 ARXQ96QS3 562 aa15.57■□□□□ 0.08
PRDM16-205ENST00000509860 BMP2KLQ5H9B9 411 aa15.57■□□□□ 0.08
PRDM16-205ENST00000509860 UTYO14607 1347 aa15.57■□□□□ 0.08
PRDM16-205ENST00000509860 SNRPA1P09661 255 aaKnown RBP15.56■□□□□ 0.08
PRDM16-205ENST00000509860 GNAI3P08754 354 aa15.56■□□□□ 0.08
PRDM16-205ENST00000509860 MYL6BP14649 208 aa15.56■□□□□ 0.08
PRDM16-205ENST00000509860 FMNL2Q96PY5 1086 aa15.56■□□□□ 0.08
PRDM16-205ENST00000509860 SSH3Q8TE77 659 aa15.56■□□□□ 0.08
PRDM16-205ENST00000509860 EXOC6BQ9Y2D4 811 aa15.56■□□□□ 0.08
PRDM16-205ENST00000509860 XAGE3Q8WTP9 111 aa15.55■□□□□ 0.08
PRDM16-205ENST00000509860 TBC1D32Q96NH3 1257 aa15.54■□□□□ 0.08
PRDM16-205ENST00000509860 BCL9O00512 1426 aa15.54■□□□□ 0.08
PRDM16-205ENST00000509860 AIMP1Q12904 312 aaKnown RBP15.54■□□□□ 0.08
PRDM16-205ENST00000509860 PIGBQ92521 554 aa15.54■□□□□ 0.08
PRDM16-205ENST00000509860 SPATA31A1Q5TZJ5 1347 aa15.54■□□□□ 0.08
PRDM16-205ENST00000509860 UBTFL1P0CB47 393 aaPredicted RBP15.54■□□□□ 0.08
PRDM16-205ENST00000509860 CICQ96RK0 1608 aaPredicted RBP15.54■□□□□ 0.08
PRDM16-205ENST00000509860 NOP58Q9Y2X3 529 aaKnown RBP15.54■□□□□ 0.08
PRDM16-205ENST00000509860 RREB1Q92766 1687 aa15.53■□□□□ 0.08
PRDM16-205ENST00000509860 PIP4K2BP78356 416 aa15.53■□□□□ 0.08
PRDM16-205ENST00000509860 COPS6Q7L5N1 327 aa15.53■□□□□ 0.08
PRDM16-205ENST00000509860 APBB1O00213 710 aa15.53■□□□□ 0.08
PRDM16-205ENST00000509860 RTL5Q5HYW3 569 aaPredicted RBP15.53■□□□□ 0.08
PRDM16-205ENST00000509860 PPP1R42Q7Z4L9 355 aa15.53■□□□□ 0.08
PRDM16-205ENST00000509860 SLC4A9Q96Q91 983 aa15.53■□□□□ 0.08
PRDM16-205ENST00000509860 ADAMTS2O95450 1211 aa15.53■□□□□ 0.08
PRDM16-205ENST00000509860 TTC5Q8N0Z6 440 aa15.53■□□□□ 0.08
PRDM16-205ENST00000509860 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.53■□□□□ 0.08
PRDM16-205ENST00000509860 TTC22Q5TAA0 569 aa15.52■□□□□ 0.08
PRDM16-205ENST00000509860 ASAP1Q9ULH1 1129 aa15.52■□□□□ 0.07
PRDM16-205ENST00000509860 EP400Q96L91 3159 aa15.52■□□□□ 0.07
PRDM16-205ENST00000509860 BCL9LQ86UU0 1499 aa15.52■□□□□ 0.07
PRDM16-205ENST00000509860 ALDH1L1O75891 902 aa15.51■□□□□ 0.07
PRDM16-205ENST00000509860 MTX1Q13505 466 aa15.51■□□□□ 0.07
PRDM16-205ENST00000509860 ATG3Q9NT62 314 aa15.51■□□□□ 0.07
PRDM16-205ENST00000509860 NEURL1BA8MQ27 555 aa15.51■□□□□ 0.07
PRDM16-205ENST00000509860 SUCLG2Q96I99 432 aa15.51■□□□□ 0.07
PRDM16-205ENST00000509860 TSHZ3Q63HK5 1081 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms