RNA–Protein interactions for RNA: ENST00000509848.5

ARHGEF28-208, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

TSL 4

Gene ARHGEF28, Length 560 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-208ENST00000509848 TM4SF1P30408 202 aa26.56■■□□□ 1.84
ARHGEF28-208ENST00000509848 POLRMTO00411 1230 aaKnown RBP26.55■■□□□ 1.84
ARHGEF28-208ENST00000509848 KCNQ3O43525 872 aa26.55■■□□□ 1.84
ARHGEF28-208ENST00000509848 N4BP2Q86UW6 1770 aaPredicted RBP26.55■■□□□ 1.84
ARHGEF28-208ENST00000509848 COL15A1P39059 1388 aa26.55■■□□□ 1.84
ARHGEF28-208ENST00000509848 KIAA1551Q9HCM1 1747 aa26.54■■□□□ 1.84
ARHGEF28-208ENST00000509848 KIF13BQ9NQT8 1826 aa26.54■■□□□ 1.84
ARHGEF28-208ENST00000509848 STARD3NLO95772 234 aa26.54■■□□□ 1.84
ARHGEF28-208ENST00000509848 KCNA3P22001 575 aa26.54■■□□□ 1.84
ARHGEF28-208ENST00000509848 ZNF526Q8TF50 670 aaPredicted RBP26.54■■□□□ 1.84
ARHGEF28-208ENST00000509848 NARFQ9UHQ1 456 aa26.54■■□□□ 1.84
ARHGEF28-208ENST00000509848 FCHSD2O94868 740 aa26.53■■□□□ 1.84
ARHGEF28-208ENST00000509848 BCL2L12Q9HB09 334 aa26.53■■□□□ 1.84
ARHGEF28-208ENST00000509848 CEMIPQ8WUJ3 1361 aa26.53■■□□□ 1.84
ARHGEF28-208ENST00000509848 HEG1Q9ULI3 1381 aa26.53■■□□□ 1.84
ARHGEF28-208ENST00000509848 BTBD11A6QL63 1104 aa26.52■■□□□ 1.84
ARHGEF28-208ENST00000509848 NFIXQ14938 502 aa26.52■■□□□ 1.84
ARHGEF28-208ENST00000509848 MCM10Q7L590 875 aa26.52■■□□□ 1.84
ARHGEF28-208ENST00000509848 DCTN1Q14203 1278 aa26.51■■□□□ 1.83
ARHGEF28-208ENST00000509848 UBR2Q8IWV8 1755 aa26.51■■□□□ 1.83
ARHGEF28-208ENST00000509848 CHRNA5P30532 468 aa26.5■■□□□ 1.83
ARHGEF28-208ENST00000509848 ARHGAP27Q6ZUM4 889 aa26.5■■□□□ 1.83
ARHGEF28-208ENST00000509848 FMNL2Q96PY5 1086 aa26.5■■□□□ 1.83
ARHGEF28-208ENST00000509848 ZNF330Q9Y3S2 320 aaPredicted RBP26.5■■□□□ 1.83
ARHGEF28-208ENST00000509848 ADCY9O60503 1353 aa26.49■■□□□ 1.83
ARHGEF28-208ENST00000509848 EIF5P55010 431 aaKnown RBP26.49■■□□□ 1.83
ARHGEF28-208ENST00000509848 RTF1Q92541 710 aaKnown RBP26.49■■□□□ 1.83
ARHGEF28-208ENST00000509848 A1BGP04217 495 aa26.48■■□□□ 1.83
ARHGEF28-208ENST00000509848 TEX13AQ9BXU3 409 aaPredicted RBP26.48■■□□□ 1.83
ARHGEF28-208ENST00000509848 GPBP1L1Q9HC44 474 aaPredicted RBP26.48■■□□□ 1.83
ARHGEF28-208ENST00000509848 SENP3-EIF4A1A0A087X0R7 540 aa26.47■■□□□ 1.83
ARHGEF28-208ENST00000509848 BICDL1Q6ZP65 573 aa26.47■■□□□ 1.83
ARHGEF28-208ENST00000509848 PIM2Q9P1W9 311 aa26.47■■□□□ 1.83
ARHGEF28-208ENST00000509848 SIPA1L3O60292 1781 aaPredicted RBP26.46■■□□□ 1.83
ARHGEF28-208ENST00000509848 TBC1D2BQ9UPU7 963 aa26.46■■□□□ 1.83
ARHGEF28-208ENST00000509848 PRAMEF22A3QJZ6 481 aa26.45■■□□□ 1.82
ARHGEF28-208ENST00000509848 SERPINB2P05120 415 aa26.45■■□□□ 1.82
ARHGEF28-208ENST00000509848 DALRD3Q5D0E6 543 aaKnown RBP26.44■■□□□ 1.82
ARHGEF28-208ENST00000509848 USP16Q9Y5T5 823 aa26.44■■□□□ 1.82
ARHGEF28-208ENST00000509848 A0A087WZG4 1122 aa26.43■■□□□ 1.82
ARHGEF28-208ENST00000509848 PIP4K2AP48426 406 aaPredicted RBP26.43■■□□□ 1.82
ARHGEF28-208ENST00000509848 IL6STP40189 918 aaPredicted RBP26.41■■□□□ 1.82
ARHGEF28-208ENST00000509848 TBC1D9BQ66K14 1250 aa26.41■■□□□ 1.82
ARHGEF28-208ENST00000509848 MIS18AQ9NYP9 233 aa26.4■■□□□ 1.82
ARHGEF28-208ENST00000509848 HTATSF1O43719 755 aaKnown RBP26.39■■□□□ 1.82
ARHGEF28-208ENST00000509848 CCDC24Q8N4L8 307 aa26.38■■□□□ 1.81
ARHGEF28-208ENST00000509848 CARMIL3Q8ND23 1372 aa26.37■■□□□ 1.81
ARHGEF28-208ENST00000509848 BRCA1P38398 1863 aaKnown RBP26.37■■□□□ 1.81
ARHGEF28-208ENST00000509848 NPM2Q86SE8 214 aaKnown RBP26.37■■□□□ 1.81
ARHGEF28-208ENST00000509848 PLEKHF1Q96S99 279 aa26.37■■□□□ 1.81
ARHGEF28-208ENST00000509848 NEFMP07197 916 aa26.36■■□□□ 1.81
ARHGEF28-208ENST00000509848 SNRPA1P09661 255 aaKnown RBP26.36■■□□□ 1.81
ARHGEF28-208ENST00000509848 DDX10Q13206 875 aaKnown RBP26.36■■□□□ 1.81
ARHGEF28-208ENST00000509848 TAF7Q15545 349 aaPredicted RBP26.36■■□□□ 1.81
ARHGEF28-208ENST00000509848 C9orf131Q5VYM1 1079 aa26.36■■□□□ 1.81
ARHGEF28-208ENST00000509848 CAMTA2O94983 1202 aa26.35■■□□□ 1.81
ARHGEF28-208ENST00000509848 C2CD5Q86YS7 1000 aa26.35■■□□□ 1.81
ARHGEF28-208ENST00000509848 AFDNP55196 1824 aaKnown RBP26.35■■□□□ 1.81
ARHGEF28-208ENST00000509848 DZIP3Q86Y13 1208 aaKnown RBP26.34■■□□□ 1.81
ARHGEF28-208ENST00000509848 THUMPD2Q9BTF0 503 aaKnown RBP26.34■■□□□ 1.81
ARHGEF28-208ENST00000509848 NRXN2Q9P2S2 1712 aa26.32■■□□□ 1.8
ARHGEF28-208ENST00000509848 KIF3CO14782 793 aa26.32■■□□□ 1.8
ARHGEF28-208ENST00000509848 NFE2L2Q16236 605 aa26.32■■□□□ 1.8
ARHGEF28-208ENST00000509848 H0YIN7 160 aa26.31■■□□□ 1.8
ARHGEF28-208ENST00000509848 NBPF26B4DH59 902 aa26.3■■□□□ 1.8
ARHGEF28-208ENST00000509848 PRR5LQ6MZQ0 368 aa26.3■■□□□ 1.8
ARHGEF28-208ENST00000509848 NBPF10Q6P3W6 841 aaKnown RBP26.3■■□□□ 1.8
ARHGEF28-208ENST00000509848 NBPF15Q8N660 670 aa26.3■■□□□ 1.8
ARHGEF28-208ENST00000509848 SETDB2Q96T68 719 aa26.3■■□□□ 1.8
ARHGEF28-208ENST00000509848 RASSF7Q02833 373 aa26.29■■□□□ 1.8
ARHGEF28-208ENST00000509848 RALBP1Q15311 655 aa26.29■■□□□ 1.8
ARHGEF28-208ENST00000509848 TTLL6Q8N841 843 aa26.29■■□□□ 1.8
ARHGEF28-208ENST00000509848 RNF181Q9P0P0 153 aa26.29■■□□□ 1.8
ARHGEF28-208ENST00000509848 ARFGEF1Q9Y6D6 1849 aa26.29■■□□□ 1.8
ARHGEF28-208ENST00000509848 SCN7AQ01118 1682 aa26.28■■□□□ 1.8
ARHGEF28-208ENST00000509848 MAPK8IP3Q9UPT6 1336 aa26.28■■□□□ 1.8
ARHGEF28-208ENST00000509848 ZNF622Q969S3 477 aaKnown RBP eCLIP26.27■■□□□ 1.8
ARHGEF28-208ENST00000509848 BRIP1Q9BX63 1249 aa26.27■■□□□ 1.8
ARHGEF28-208ENST00000509848 NMRK2Q9NPI5 230 aa26.27■■□□□ 1.8
ARHGEF28-208ENST00000509848 NPHP1O15259 732 aa26.26■■□□□ 1.79
ARHGEF28-208ENST00000509848 PNNQ9H307 717 aaKnown RBP26.26■■□□□ 1.79
ARHGEF28-208ENST00000509848 CNBD1Q8NA66 436 aa26.25■■□□□ 1.79
ARHGEF28-208ENST00000509848 ZNF219Q9P2Y4 722 aaPredicted RBP26.25■■□□□ 1.79
ARHGEF28-208ENST00000509848 PDE6BP35913 854 aa26.24■■□□□ 1.79
ARHGEF28-208ENST00000509848 NGEFQ8N5V2 710 aa26.24■■□□□ 1.79
ARHGEF28-208ENST00000509848 PNISRQ8TF01 805 aaKnown RBP26.24■■□□□ 1.79
ARHGEF28-208ENST00000509848 PRELPP51888 382 aa26.23■■□□□ 1.79
ARHGEF28-208ENST00000509848 EIF4A1P60842 406 aaKnown RBP26.23■■□□□ 1.79
ARHGEF28-208ENST00000509848 DLG5Q8TDM6 1919 aa26.22■■□□□ 1.79
ARHGEF28-208ENST00000509848 CLEC4GQ6UXB4 293 aa26.21■■□□□ 1.79
ARHGEF28-208ENST00000509848 ZNF652Q9Y2D9 606 aa26.21■■□□□ 1.79
ARHGEF28-208ENST00000509848 FAM177BA6PVY3 158 aa26.2■■□□□ 1.78
ARHGEF28-208ENST00000509848 RIPK4P57078 832 aa26.2■■□□□ 1.78
ARHGEF28-208ENST00000509848 ST5P78524 1137 aa26.2■■□□□ 1.78
ARHGEF28-208ENST00000509848 HLFQ16534 295 aa26.2■■□□□ 1.78
ARHGEF28-208ENST00000509848 NBPF5PQ86XG9 351 aaPredicted RBP26.2■■□□□ 1.78
ARHGEF28-208ENST00000509848 RRP7AQ9Y3A4 280 aaKnown RBP26.2■■□□□ 1.78
ARHGEF28-208ENST00000509848 ANKRD31Q8N7Z5 1873 aa26.19■■□□□ 1.78
ARHGEF28-208ENST00000509848 C21orf2O43822 256 aa26.19■■□□□ 1.78
ARHGEF28-208ENST00000509848 HSPA6P17066 643 aa26.19■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms