RNA–Protein interactions for RNA: ENST00000509743.6

SSBP2-213, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 4

Gene SSBP2, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-213ENST00000509743 MAP3K2Q9Y2U5 619 aa9.75□□□□□ -0.85
SSBP2-213ENST00000509743 LRRFIP2Q9Y608 721 aaKnown RBP9.75□□□□□ -0.85
SSBP2-213ENST00000509743 SIPA1L3O60292 1781 aaPredicted RBP9.74□□□□□ -0.85
SSBP2-213ENST00000509743 PROSER3Q2NL68 480 aa9.74□□□□□ -0.85
SSBP2-213ENST00000509743 PLEKHM2Q8IWE5 1019 aa9.74□□□□□ -0.85
SSBP2-213ENST00000509743 LINS1Q8NG48 757 aa9.74□□□□□ -0.85
SSBP2-213ENST00000509743 SSH3Q8TE77 659 aa9.74□□□□□ -0.85
SSBP2-213ENST00000509743 BTG4Q9NY30 223 aa9.74□□□□□ -0.85
SSBP2-213ENST00000509743 ROBO1Q9Y6N7 1651 aa9.74□□□□□ -0.85
SSBP2-213ENST00000509743 COL14A1Q05707 1796 aaKnown RBP9.73□□□□□ -0.85
SSBP2-213ENST00000509743 N4BP2Q86UW6 1770 aaPredicted RBP9.73□□□□□ -0.85
SSBP2-213ENST00000509743 PRAMEF22A3QJZ6 481 aa9.73□□□□□ -0.85
SSBP2-213ENST00000509743 RAB11FIP3O75154 756 aa9.73□□□□□ -0.85
SSBP2-213ENST00000509743 CDC45O75419 566 aa9.73□□□□□ -0.85
SSBP2-213ENST00000509743 SEC24BO95487 1268 aa9.73□□□□□ -0.85
SSBP2-213ENST00000509743 ANXA1P04083 346 aa9.73□□□□□ -0.85
SSBP2-213ENST00000509743 NEXNQ0ZGT2 675 aa9.73□□□□□ -0.85
SSBP2-213ENST00000509743 MTX1Q13505 466 aa9.73□□□□□ -0.85
SSBP2-213ENST00000509743 POLA2Q14181 598 aa9.73□□□□□ -0.85
SSBP2-213ENST00000509743 PDIA6Q15084 440 aa9.73□□□□□ -0.85
SSBP2-213ENST00000509743 HSP90AB4PQ58FF6 505 aa9.73□□□□□ -0.85
SSBP2-213ENST00000509743 TTC22Q5TAA0 569 aa9.73□□□□□ -0.85
SSBP2-213ENST00000509743 LRRCC1Q9C099 1032 aa9.73□□□□□ -0.85
SSBP2-213ENST00000509743 RGPD5Q99666 1765 aa9.73□□□□□ -0.85
SSBP2-213ENST00000509743 DISP2A7MBM2 1401 aa9.73□□□□□ -0.85
SSBP2-213ENST00000509743 TNS2Q63HR2 1409 aa9.73□□□□□ -0.85
SSBP2-213ENST00000509743 BECN1Q14457 450 aa9.72□□□□□ -0.85
SSBP2-213ENST00000509743 CDCA7Q9BWT1 371 aaPredicted RBP9.72□□□□□ -0.85
SSBP2-213ENST00000509743 OSBPL3Q9H4L5 887 aa9.72□□□□□ -0.85
SSBP2-213ENST00000509743 C9orf78Q9NZ63 289 aaPredicted RBP9.72□□□□□ -0.85
SSBP2-213ENST00000509743 UTYO14607 1347 aa9.72□□□□□ -0.85
SSBP2-213ENST00000509743 SCN11AQ9UI33 1791 aa9.72□□□□□ -0.85
SSBP2-213ENST00000509743 PNMA6EA0A0J9YXQ4 647 aa9.71□□□□□ -0.86
SSBP2-213ENST00000509743 TOM1O60784 492 aa9.71□□□□□ -0.86
SSBP2-213ENST00000509743 MFAP1P55081 439 aaKnown RBP9.71□□□□□ -0.86
SSBP2-213ENST00000509743 CASC1Q6TDU7 716 aa9.71□□□□□ -0.86
SSBP2-213ENST00000509743 RIC3Q7Z5B4 369 aa9.71□□□□□ -0.86
SSBP2-213ENST00000509743 DDX54Q8TDD1 881 aaKnown RBP9.71□□□□□ -0.86
SSBP2-213ENST00000509743 XAGE3Q8WTP9 111 aa9.71□□□□□ -0.86
SSBP2-213ENST00000509743 TMOD3Q9NYL9 352 aa9.71□□□□□ -0.86
SSBP2-213ENST00000509743 AOX1Q06278 1338 aa9.71□□□□□ -0.86
SSBP2-213ENST00000509743 GRM8O00222 908 aa9.7□□□□□ -0.86
SSBP2-213ENST00000509743 NBPF7P0C2Y1 421 aaPredicted RBP9.7□□□□□ -0.86
SSBP2-213ENST00000509743 GSPT1P15170 499 aaKnown RBP9.7□□□□□ -0.86
SSBP2-213ENST00000509743 ANKRD13DQ6ZTN6 518 aa9.7□□□□□ -0.86
SSBP2-213ENST00000509743 COPS6Q7L5N1 327 aa9.7□□□□□ -0.86
SSBP2-213ENST00000509743 LRP10Q7Z4F1 713 aa9.7□□□□□ -0.86
SSBP2-213ENST00000509743 PPP1R42Q7Z4L9 355 aa9.7□□□□□ -0.86
SSBP2-213ENST00000509743 METTL22Q9BUU2 404 aaPredicted RBP9.7□□□□□ -0.86
SSBP2-213ENST00000509743 C22orf23Q9BZE7 217 aa9.7□□□□□ -0.86
SSBP2-213ENST00000509743 EXOC6BQ9Y2D4 811 aa9.7□□□□□ -0.86
SSBP2-213ENST00000509743 APBB1O00213 710 aa9.69□□□□□ -0.86
SSBP2-213ENST00000509743 SRGAP3O43295 1099 aa9.69□□□□□ -0.86
SSBP2-213ENST00000509743 GLI3P10071 1580 aa9.69□□□□□ -0.86
SSBP2-213ENST00000509743 MYL6BP14649 208 aa9.69□□□□□ -0.86
SSBP2-213ENST00000509743 RBM25P49756 843 aaKnown RBP9.69□□□□□ -0.86
SSBP2-213ENST00000509743 PDE1AP54750 535 aa9.69□□□□□ -0.86
SSBP2-213ENST00000509743 COL16A1Q07092 1604 aaPredicted RBP9.69□□□□□ -0.86
SSBP2-213ENST00000509743 AIMP1Q12904 312 aaKnown RBP9.69□□□□□ -0.86
SSBP2-213ENST00000509743 VIRMAQ69YN4 1812 aaKnown RBP9.69□□□□□ -0.86
SSBP2-213ENST00000509743 TBC1D9Q6ZT07 1266 aa9.69□□□□□ -0.86
SSBP2-213ENST00000509743 KCPQ6ZWJ8 1503 aa9.69□□□□□ -0.86
SSBP2-213ENST00000509743 PLBD2Q8NHP8 589 aa9.69□□□□□ -0.86
SSBP2-213ENST00000509743 KIF1BPQ96EK5 621 aa9.69□□□□□ -0.86
SSBP2-213ENST00000509743 SALL3Q9BXA9 1300 aa9.69□□□□□ -0.86
SSBP2-213ENST00000509743 TEX13AQ9BXU3 409 aaPredicted RBP9.69□□□□□ -0.86
SSBP2-213ENST00000509743 STAP2Q9UGK3 403 aa9.69□□□□□ -0.86
SSBP2-213ENST00000509743 THRAP3Q9Y2W1 955 aaKnown RBP9.69□□□□□ -0.86
SSBP2-213ENST00000509743 USP16Q9Y5T5 823 aa9.69□□□□□ -0.86
SSBP2-213ENST00000509743 PLCH1Q4KWH8 1693 aa9.68□□□□□ -0.86
SSBP2-213ENST00000509743 LRP6O75581 1613 aa9.68□□□□□ -0.86
SSBP2-213ENST00000509743 PAPPAQ13219 1627 aa9.68□□□□□ -0.86
SSBP2-213ENST00000509743 COL15A1P39059 1388 aa9.68□□□□□ -0.86
SSBP2-213ENST00000509743 NEURL1BA8MQ27 555 aa9.68□□□□□ -0.86
SSBP2-213ENST00000509743 SMARCA5O60264 1052 aaPredicted RBP9.68□□□□□ -0.86
SSBP2-213ENST00000509743 SURF6O75683 361 aaKnown RBP9.68□□□□□ -0.86
SSBP2-213ENST00000509743 MX1P20591 662 aa9.68□□□□□ -0.86
SSBP2-213ENST00000509743 CWF19L2Q2TBE0 894 aaKnown RBP9.68□□□□□ -0.86
SSBP2-213ENST00000509743 ERC1Q8IUD2 1116 aa9.68□□□□□ -0.86
SSBP2-213ENST00000509743 C16orf71Q8IYS4 520 aaPredicted RBP9.68□□□□□ -0.86
SSBP2-213ENST00000509743 VSIG10Q8N0Z9 540 aa9.68□□□□□ -0.86
SSBP2-213ENST00000509743 USP35Q9P2H5 1018 aa9.68□□□□□ -0.86
SSBP2-213ENST00000509743 EXOC5O00471 708 aa9.67□□□□□ -0.86
SSBP2-213ENST00000509743 IGKV5-2P06315 115 aa9.67□□□□□ -0.86
SSBP2-213ENST00000509743 SDSP20132 328 aa9.67□□□□□ -0.86
SSBP2-213ENST00000509743 GCKRQ14397 625 aa9.67□□□□□ -0.86
SSBP2-213ENST00000509743 OTUD7AQ8TE49 926 aaPredicted RBP9.67□□□□□ -0.86
SSBP2-213ENST00000509743 MYD88Q99836 296 aa9.67□□□□□ -0.86
SSBP2-213ENST00000509743 SPATA31A1Q5TZJ5 1347 aa9.66□□□□□ -0.86
SSBP2-213ENST00000509743 RHPN1Q8TCX5 695 aa9.66□□□□□ -0.86
SSBP2-213ENST00000509743 C5P01031 1676 aa9.66□□□□□ -0.86
SSBP2-213ENST00000509743 LAMB4A4D0S4 1761 aa9.65□□□□□ -0.86
SSBP2-213ENST00000509743 USP42Q9H9J4 1324 aaKnown RBP9.65□□□□□ -0.86
SSBP2-213ENST00000509743 NBPF26B4DH59 902 aa9.65□□□□□ -0.86
SSBP2-213ENST00000509743 PTCD1O75127 700 aaKnown RBP9.65□□□□□ -0.86
SSBP2-213ENST00000509743 STARD3NLO95772 234 aa9.65□□□□□ -0.86
SSBP2-213ENST00000509743 OS9Q13438 667 aaPredicted RBP9.65□□□□□ -0.86
SSBP2-213ENST00000509743 NBPF14Q5TI25 921 aa9.65□□□□□ -0.86
SSBP2-213ENST00000509743 NBPF10Q6P3W6 841 aaKnown RBP9.65□□□□□ -0.86
SSBP2-213ENST00000509743 NBPF15Q8N660 670 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 121.5 ms