RNA–Protein interactions for RNA: ENST00000509576.5

DDX41-210, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 819 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-210ENST00000509576 MTHFSDQ2M296 383 aaKnown RBP18.28■□□□□ 0.52
DDX41-210ENST00000509576 AKAP4Q5JQC9 854 aa18.28■□□□□ 0.52
DDX41-210ENST00000509576 ARHGAP27Q6ZUM4 889 aa18.28■□□□□ 0.52
DDX41-210ENST00000509576 COL11A2P13942 1736 aaPredicted RBP18.27■□□□□ 0.52
DDX41-210ENST00000509576 PRELPP51888 382 aa18.27■□□□□ 0.52
DDX41-210ENST00000509576 ZBTB1Q9Y2K1 713 aa18.27■□□□□ 0.52
DDX41-210ENST00000509576 SCN7AQ01118 1682 aa18.26■□□□□ 0.51
DDX41-210ENST00000509576 USPL1Q5W0Q7 1092 aa18.26■□□□□ 0.51
DDX41-210ENST00000509576 CARMIL3Q8ND23 1372 aa18.26■□□□□ 0.51
DDX41-210ENST00000509576 CCER1Q8TC90 406 aaPredicted RBP18.25■□□□□ 0.51
DDX41-210ENST00000509576 TIAM2Q8IVF5 1701 aa18.24■□□□□ 0.51
DDX41-210ENST00000509576 NFIXQ14938 502 aa18.24■□□□□ 0.51
DDX41-210ENST00000509576 C9orf131Q5VYM1 1079 aa18.24■□□□□ 0.51
DDX41-210ENST00000509576 COL15A1P39059 1388 aa18.24■□□□□ 0.51
DDX41-210ENST00000509576 TNRC6CQ9HCJ0 1690 aaKnown RBP18.24■□□□□ 0.51
DDX41-210ENST00000509576 CACNA1SQ13698 1873 aa18.23■□□□□ 0.51
DDX41-210ENST00000509576 CC2D1BQ5T0F9 858 aaKnown RBP18.23■□□□□ 0.51
DDX41-210ENST00000509576 DNAJC5GQ8N7S2 189 aa18.23■□□□□ 0.51
DDX41-210ENST00000509576 PCNTO95613 3336 aa18.23■□□□□ 0.51
DDX41-210ENST00000509576 IFFO2Q5TF58 517 aa18.22■□□□□ 0.51
DDX41-210ENST00000509576 PIM2Q9P1W9 311 aa18.22■□□□□ 0.51
DDX41-210ENST00000509576 BCORQ6W2J9 1755 aa18.22■□□□□ 0.51
DDX41-210ENST00000509576 TOMM70O94826 608 aa18.2■□□□□ 0.5
DDX41-210ENST00000509576 HTRA3P83110 453 aa18.2■□□□□ 0.5
DDX41-210ENST00000509576 RASSF7Q02833 373 aa18.2■□□□□ 0.5
DDX41-210ENST00000509576 NARFQ9UHQ1 456 aa18.2■□□□□ 0.5
DDX41-210ENST00000509576 FER1L6Q2WGJ9 1857 aa18.2■□□□□ 0.5
DDX41-210ENST00000509576 DALRD3Q5D0E6 543 aaKnown RBP18.19■□□□□ 0.5
DDX41-210ENST00000509576 IL17REQ8NFR9 667 aa18.19■□□□□ 0.5
DDX41-210ENST00000509576 DICER1Q9UPY3 1922 aaKnown RBP18.19■□□□□ 0.5
DDX41-210ENST00000509576 DIAPH1O60610 1272 aaKnown RBP18.18■□□□□ 0.5
DDX41-210ENST00000509576 ZNF496Q96IT1 587 aaPredicted RBP18.17■□□□□ 0.5
DDX41-210ENST00000509576 RNF181Q9P0P0 153 aa18.17■□□□□ 0.5
DDX41-210ENST00000509576 ZPR1O75312 459 aa18.16■□□□□ 0.5
DDX41-210ENST00000509576 EIF5P55010 431 aaKnown RBP18.16■□□□□ 0.5
DDX41-210ENST00000509576 SLX4Q8IY92 1834 aa18.16■□□□□ 0.5
DDX41-210ENST00000509576 NPC1L1Q9UHC9 1359 aa18.16■□□□□ 0.5
DDX41-210ENST00000509576 ARFGEF2Q9Y6D5 1785 aa18.15■□□□□ 0.5
DDX41-210ENST00000509576 KCNQ3O43525 872 aa18.15■□□□□ 0.5
DDX41-210ENST00000509576 SERPINB2P05120 415 aa18.15■□□□□ 0.5
DDX41-210ENST00000509576 CANXP27824 592 aaKnown RBP18.15■□□□□ 0.5
DDX41-210ENST00000509576 VSIG10Q8N0Z9 540 aa18.15■□□□□ 0.5
DDX41-210ENST00000509576 CNGB1Q14028 1251 aaPredicted RBP18.14■□□□□ 0.49
DDX41-210ENST00000509576 PHACTR3Q96KR7 559 aa18.14■□□□□ 0.49
DDX41-210ENST00000509576 CEMIPQ8WUJ3 1361 aa18.14■□□□□ 0.49
DDX41-210ENST00000509576 HEG1Q9ULI3 1381 aa18.14■□□□□ 0.49
DDX41-210ENST00000509576 NFKBIEO00221 500 aa18.13■□□□□ 0.49
DDX41-210ENST00000509576 APLP1P51693 650 aa18.13■□□□□ 0.49
DDX41-210ENST00000509576 TBC1D9BQ66K14 1250 aa18.13■□□□□ 0.49
DDX41-210ENST00000509576 CCDC24Q8N4L8 307 aa18.13■□□□□ 0.49
DDX41-210ENST00000509576 RRAGCQ9HB90 399 aa18.13■□□□□ 0.49
DDX41-210ENST00000509576 DLG5Q8TDM6 1919 aa18.12■□□□□ 0.49
DDX41-210ENST00000509576 RBM46Q8TBY0 533 aaKnown RBP18.12■□□□□ 0.49
DDX41-210ENST00000509576 ZNF790Q6PG37 636 aa18.11■□□□□ 0.49
DDX41-210ENST00000509576 BICDL1Q6ZP65 573 aa18.11■□□□□ 0.49
DDX41-210ENST00000509576 PRAMEF22A3QJZ6 481 aa18.1■□□□□ 0.49
DDX41-210ENST00000509576 RSPH6AQ9H0K4 717 aa18.1■□□□□ 0.49
DDX41-210ENST00000509576 POTECB2RU33 542 aa18.09■□□□□ 0.49
DDX41-210ENST00000509576 U2SURPO15042 1029 aaKnown RBP18.09■□□□□ 0.49
DDX41-210ENST00000509576 A1BGP04217 495 aa18.09■□□□□ 0.49
DDX41-210ENST00000509576 PIP4K2AP48426 406 aaPredicted RBP18.09■□□□□ 0.49
DDX41-210ENST00000509576 C2CD5Q86YS7 1000 aa18.09■□□□□ 0.49
DDX41-210ENST00000509576 TBC1D2BQ9UPU7 963 aa18.09■□□□□ 0.49
DDX41-210ENST00000509576 GNAT3A8MTJ3 354 aa18.08■□□□□ 0.48
DDX41-210ENST00000509576 PRR5LQ6MZQ0 368 aa18.08■□□□□ 0.48
DDX41-210ENST00000509576 CAMTA2O94983 1202 aa18.07■□□□□ 0.48
DDX41-210ENST00000509576 TTLL6Q8N841 843 aa18.07■□□□□ 0.48
DDX41-210ENST00000509576 KDM2BQ8NHM5 1336 aa18.06■□□□□ 0.48
DDX41-210ENST00000509576 PRKAR2BP31323 418 aa18.06■□□□□ 0.48
DDX41-210ENST00000509576 USP16Q9Y5T5 823 aa18.06■□□□□ 0.48
DDX41-210ENST00000509576 LAMB4A4D0S4 1761 aa18.06■□□□□ 0.48
DDX41-210ENST00000509576 STARD3NLO95772 234 aa18.05■□□□□ 0.48
DDX41-210ENST00000509576 LMNB1P20700 586 aa18.05■□□□□ 0.48
DDX41-210ENST00000509576 TTC5Q8N0Z6 440 aa18.05■□□□□ 0.48
DDX41-210ENST00000509576 GAS2L2Q8NHY3 880 aa18.05■□□□□ 0.48
DDX41-210ENST00000509576 KDM3BQ7LBC6 1761 aa18.04■□□□□ 0.48
DDX41-210ENST00000509576 IL6STP40189 918 aaPredicted RBP18.04■□□□□ 0.48
DDX41-210ENST00000509576 TEFQ10587 303 aa18.04■□□□□ 0.48
DDX41-210ENST00000509576 FSTL1Q12841 308 aa18.04■□□□□ 0.48
DDX41-210ENST00000509576 KLRG1Q96E93 195 aa18.04■□□□□ 0.48
DDX41-210ENST00000509576 GLTPD2A6NH11 291 aa18.03■□□□□ 0.48
DDX41-210ENST00000509576 JMYQ8N9B5 988 aa18.03■□□□□ 0.48
DDX41-210ENST00000509576 ZNF219Q9P2Y4 722 aaPredicted RBP18.03■□□□□ 0.48
DDX41-210ENST00000509576 ZNF330Q9Y3S2 320 aaPredicted RBP18.03■□□□□ 0.48
DDX41-210ENST00000509576 ZC3H4Q9UPT8 1303 aaKnown RBP18.02■□□□□ 0.48
DDX41-210ENST00000509576 H0YIN7 160 aa18.02■□□□□ 0.48
DDX41-210ENST00000509576 DCTN1Q14203 1278 aa18.02■□□□□ 0.48
DDX41-210ENST00000509576 NUP98P52948 1817 aa18.01■□□□□ 0.47
DDX41-210ENST00000509576 NBPF26B4DH59 902 aa18.01■□□□□ 0.47
DDX41-210ENST00000509576 C21orf2O43822 256 aa18.01■□□□□ 0.47
DDX41-210ENST00000509576 NBPF10Q6P3W6 841 aaKnown RBP18.01■□□□□ 0.47
DDX41-210ENST00000509576 MCM10Q7L590 875 aa18.01■□□□□ 0.47
DDX41-210ENST00000509576 NBPF15Q8N660 670 aa18.01■□□□□ 0.47
DDX41-210ENST00000509576 FMNL2Q96PY5 1086 aa18.01■□□□□ 0.47
DDX41-210ENST00000509576 BRIP1Q9BX63 1249 aa18.01■□□□□ 0.47
DDX41-210ENST00000509576 A0A087WZG4 1122 aa18■□□□□ 0.47
DDX41-210ENST00000509576 BTBD11A6QL63 1104 aa18■□□□□ 0.47
DDX41-210ENST00000509576 PPP2R1AP30153 589 aa18■□□□□ 0.47
DDX41-210ENST00000509576 C16orf71Q8IYS4 520 aaPredicted RBP18■□□□□ 0.47
DDX41-210ENST00000509576 ZNF622Q969S3 477 aaKnown RBP eCLIP18■□□□□ 0.471e-8■■□□□ 14.1
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms