RNA–Protein interactions for RNA: ENST00000509558.1

ZFYVE16-204, Transcript of zinc finger FYVE-type containing 16, humanhuman

TSL 3

Gene ZFYVE16, Length 637 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE16-204ENST00000509558 NGLY1Q96IV0 654 aa11.15□□□□□ -0.62
ZFYVE16-204ENST00000509558 CHMP4AQ9BY43 222 aa11.15□□□□□ -0.62
ZFYVE16-204ENST00000509558 BCL9O00512 1426 aa11.15□□□□□ -0.62
ZFYVE16-204ENST00000509558 ADCY9O60503 1353 aa11.15□□□□□ -0.63
ZFYVE16-204ENST00000509558 SNRPA1P09661 255 aaKnown RBP11.14□□□□□ -0.63
ZFYVE16-204ENST00000509558 HDAC1Q13547 482 aaPredicted RBP11.14□□□□□ -0.63
ZFYVE16-204ENST00000509558 LRP10Q7Z4F1 713 aa11.14□□□□□ -0.63
ZFYVE16-204ENST00000509558 SKAP1Q86WV1 359 aa11.14□□□□□ -0.63
ZFYVE16-204ENST00000509558 DBF4Q9UBU7 674 aaPredicted RBP11.14□□□□□ -0.63
ZFYVE16-204ENST00000509558 TJP1Q07157 1748 aa11.14□□□□□ -0.63
ZFYVE16-204ENST00000509558 CICQ96RK0 1608 aaPredicted RBP11.13□□□□□ -0.63
ZFYVE16-204ENST00000509558 ATRNO75882 1429 aa11.13□□□□□ -0.63
ZFYVE16-204ENST00000509558 CCT4P50991 539 aaKnown RBP11.13□□□□□ -0.63
ZFYVE16-204ENST00000509558 DDB1Q16531 1140 aa11.13□□□□□ -0.63
ZFYVE16-204ENST00000509558 PIGBQ92521 554 aa11.13□□□□□ -0.63
ZFYVE16-204ENST00000509558 CHMP4BQ9H444 224 aaKnown RBP11.13□□□□□ -0.63
ZFYVE16-204ENST00000509558 C1orf115Q9H7X2 142 aa11.13□□□□□ -0.63
ZFYVE16-204ENST00000509558 DDX21Q9NR30 783 aaKnown RBP eCLIP11.13□□□□□ -0.63
ZFYVE16-204ENST00000509558 TMOD3Q9NYL9 352 aa11.13□□□□□ -0.63
ZFYVE16-204ENST00000509558 CCDC9Q9Y3X0 531 aaKnown RBP11.13□□□□□ -0.63
ZFYVE16-204ENST00000509558 USP16Q9Y5T5 823 aa11.13□□□□□ -0.63
ZFYVE16-204ENST00000509558 MARCH10Q8NA82 808 aaPredicted RBP11.12□□□□□ -0.63
ZFYVE16-204ENST00000509558 MEIS3Q99687 375 aa11.12□□□□□ -0.63
ZFYVE16-204ENST00000509558 USP21Q9UK80 565 aa11.12□□□□□ -0.63
ZFYVE16-204ENST00000509558 NUP188Q5SRE5 1749 aa11.12□□□□□ -0.63
ZFYVE16-204ENST00000509558 ARFGEF2Q9Y6D5 1785 aa11.11□□□□□ -0.63
ZFYVE16-204ENST00000509558 FAM98CQ17RN3 349 aaKnown RBP11.11□□□□□ -0.63
ZFYVE16-204ENST00000509558 SLC4A10Q6U841 1118 aa11.11□□□□□ -0.63
ZFYVE16-204ENST00000509558 RWDD1Q9H446 243 aaPredicted RBP11.11□□□□□ -0.63
ZFYVE16-204ENST00000509558 TSHZ2Q9NRE2 1034 aa11.11□□□□□ -0.63
ZFYVE16-204ENST00000509558 ATG3Q9NT62 314 aa11.11□□□□□ -0.63
ZFYVE16-204ENST00000509558 HYPKQ9NX55 129 aa11.11□□□□□ -0.63
ZFYVE16-204ENST00000509558 AFF2P51816 1311 aa11.1□□□□□ -0.63
ZFYVE16-204ENST00000509558 ERBB4Q15303 1308 aa11.1□□□□□ -0.63
ZFYVE16-204ENST00000509558 SIRT2Q8IXJ6 389 aa11.1□□□□□ -0.63
ZFYVE16-204ENST00000509558 SMC5Q8IY18 1101 aa11.1□□□□□ -0.63
ZFYVE16-204ENST00000509558 DNAAF4Q8WXU2 420 aa11.1□□□□□ -0.63
ZFYVE16-204ENST00000509558 ASAP1Q9ULH1 1129 aa11.1□□□□□ -0.63
ZFYVE16-204ENST00000509558 NHSQ6T4R5 1651 aa11.09□□□□□ -0.63
ZFYVE16-204ENST00000509558 PI4KAP2A4QPH2 592 aa11.09□□□□□ -0.63
ZFYVE16-204ENST00000509558 NBPF26B4DH59 902 aa11.09□□□□□ -0.63
ZFYVE16-204ENST00000509558 BEND3Q5T5X7 828 aa11.09□□□□□ -0.63
ZFYVE16-204ENST00000509558 NBPF14Q5TI25 921 aa11.09□□□□□ -0.63
ZFYVE16-204ENST00000509558 MEX3CQ5U5Q3 659 aaKnown RBP11.09□□□□□ -0.63
ZFYVE16-204ENST00000509558 NBPF10Q6P3W6 841 aaKnown RBP11.09□□□□□ -0.63
ZFYVE16-204ENST00000509558 NBPF15Q8N660 670 aa11.09□□□□□ -0.63
ZFYVE16-204ENST00000509558 PI4KAP1Q8N8J0 262 aa11.09□□□□□ -0.63
ZFYVE16-204ENST00000509558 RREB1Q92766 1687 aa11.08□□□□□ -0.64
ZFYVE16-204ENST00000509558 IBTKQ9P2D0 1353 aaPredicted RBP11.08□□□□□ -0.64
ZFYVE16-204ENST00000509558 PTCD1O75127 700 aaKnown RBP11.08□□□□□ -0.64
ZFYVE16-204ENST00000509558 PIP4K2AP48426 406 aaPredicted RBP11.08□□□□□ -0.64
ZFYVE16-204ENST00000509558 PRIM1P49642 420 aaKnown RBP11.08□□□□□ -0.64
ZFYVE16-204ENST00000509558 CEP85Q6P2H3 762 aa11.08□□□□□ -0.64
ZFYVE16-204ENST00000509558 KSR2Q6VAB6 950 aa11.08□□□□□ -0.64
ZFYVE16-204ENST00000509558 VSIG10Q8N0Z9 540 aa11.08□□□□□ -0.64
ZFYVE16-204ENST00000509558 ANKRD44Q8N8A2 993 aa11.08□□□□□ -0.64
ZFYVE16-204ENST00000509558 XAGE3Q8WTP9 111 aa11.08□□□□□ -0.64
ZFYVE16-204ENST00000509558 SLC4A9Q96Q91 983 aa11.08□□□□□ -0.64
ZFYVE16-204ENST00000509558 PDZRN3Q9UPQ7 1066 aa11.08□□□□□ -0.64
ZFYVE16-204ENST00000509558 MAP3K2Q9Y2U5 619 aa11.08□□□□□ -0.64
ZFYVE16-204ENST00000509558 MYL6BP14649 208 aa11.07□□□□□ -0.64
ZFYVE16-204ENST00000509558 SRCIN1Q9C0H9 1055 aa11.07□□□□□ -0.64
ZFYVE16-204ENST00000509558 USP44Q9H0E7 712 aa11.07□□□□□ -0.64
ZFYVE16-204ENST00000509558 ZNF831Q5JPB2 1677 aa11.07□□□□□ -0.64
ZFYVE16-204ENST00000509558 DDX58O95786 925 aaKnown RBP11.06□□□□□ -0.64
ZFYVE16-204ENST00000509558 A1BGP04217 495 aa11.06□□□□□ -0.64
ZFYVE16-204ENST00000509558 COPS6Q7L5N1 327 aa11.06□□□□□ -0.64
ZFYVE16-204ENST00000509558 DNAJC10Q8IXB1 793 aa11.06□□□□□ -0.64
ZFYVE16-204ENST00000509558 RPAP2Q8IXW5 612 aaPredicted RBP11.06□□□□□ -0.64
ZFYVE16-204ENST00000509558 ACSBG1Q96GR2 724 aa11.06□□□□□ -0.64
ZFYVE16-204ENST00000509558 GJD4Q96KN9 370 aaPredicted RBP11.06□□□□□ -0.64
ZFYVE16-204ENST00000509558 AFDNP55196 1824 aaKnown RBP11.06□□□□□ -0.64
ZFYVE16-204ENST00000509558 COL5A3P25940 1745 aaPredicted RBP11.06□□□□□ -0.64
ZFYVE16-204ENST00000509558 ALDH1L1O75891 902 aa11.05□□□□□ -0.64
ZFYVE16-204ENST00000509558 GNAI2P04899 355 aa11.05□□□□□ -0.64
ZFYVE16-204ENST00000509558 GNAI3P08754 354 aa11.05□□□□□ -0.64
ZFYVE16-204ENST00000509558 AIMP1Q12904 312 aaKnown RBP11.05□□□□□ -0.64
ZFYVE16-204ENST00000509558 SYTL4Q96C24 671 aaPredicted RBP11.05□□□□□ -0.64
ZFYVE16-204ENST00000509558 TRPC5Q9UL62 973 aaPredicted RBP11.05□□□□□ -0.64
ZFYVE16-204ENST00000509558 BTAF1O14981 1849 aa11.05□□□□□ -0.64
ZFYVE16-204ENST00000509558 SBF2Q86WG5 1849 aa11.05□□□□□ -0.64
ZFYVE16-204ENST00000509558 ONECUT3O60422 494 aaPredicted RBP11.04□□□□□ -0.64
ZFYVE16-204ENST00000509558 IGKV5-2P06315 115 aa11.04□□□□□ -0.64
ZFYVE16-204ENST00000509558 PDE4AP27815 886 aa11.04□□□□□ -0.64
ZFYVE16-204ENST00000509558 RGS3P49796 1198 aa11.04□□□□□ -0.64
ZFYVE16-204ENST00000509558 LINS1Q8NG48 757 aa11.04□□□□□ -0.64
ZFYVE16-204ENST00000509558 GCC1Q96CN9 775 aa11.04□□□□□ -0.64
ZFYVE16-204ENST00000509558 RBM42Q9BTD8 480 aaKnown RBP11.04□□□□□ -0.64
ZFYVE16-204ENST00000509558 METTL22Q9BUU2 404 aaPredicted RBP11.04□□□□□ -0.64
ZFYVE16-204ENST00000509558 LRRFIP2Q9Y608 721 aaKnown RBP11.04□□□□□ -0.64
ZFYVE16-204ENST00000509558 PALLDQ8WX93 1383 aa11.03□□□□□ -0.64
ZFYVE16-204ENST00000509558 KCNQ2O43526 872 aa11.03□□□□□ -0.64
ZFYVE16-204ENST00000509558 NBPF7P0C2Y1 421 aaPredicted RBP11.03□□□□□ -0.64
ZFYVE16-204ENST00000509558 UBTFL1P0CB47 393 aaPredicted RBP11.03□□□□□ -0.64
ZFYVE16-204ENST00000509558 CYP19A1P11511 503 aaPredicted RBP11.03□□□□□ -0.64
ZFYVE16-204ENST00000509558 NUCB1Q02818 461 aa11.03□□□□□ -0.64
ZFYVE16-204ENST00000509558 CWF19L2Q2TBE0 894 aaKnown RBP11.03□□□□□ -0.64
ZFYVE16-204ENST00000509558 TTLL7Q6ZT98 887 aa11.03□□□□□ -0.64
ZFYVE16-204ENST00000509558 ANKRD13DQ6ZTN6 518 aa11.03□□□□□ -0.64
ZFYVE16-204ENST00000509558 PLBD2Q8NHP8 589 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms