RNA–Protein interactions for RNA: ENST00000509490.5

PDGFRA-208, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best)

Gene PDGFRA, Length 2,991 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-208ENST00000509490 F6X3S4 739 aa11.22□□□□□ -0.61
PDGFRA-208ENST00000509490 NEK4P51957 841 aa11.22□□□□□ -0.61
PDGFRA-208ENST00000509490 NAP1L5Q96NT1 182 aaPredicted RBP11.22□□□□□ -0.61
PDGFRA-208ENST00000509490 PRPF40AO75400 957 aaKnown RBP11.21□□□□□ -0.61
PDGFRA-208ENST00000509490 PRIM1P49642 420 aaKnown RBP11.21□□□□□ -0.61
PDGFRA-208ENST00000509490 UVSSAQ2YD98 709 aa11.21□□□□□ -0.61
PDGFRA-208ENST00000509490 IL17REQ8NFR9 667 aa11.21□□□□□ -0.61
PDGFRA-208ENST00000509490 PI4K2BQ8TCG2 481 aa11.21□□□□□ -0.61
PDGFRA-208ENST00000509490 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.21□□□□□ -0.61
PDGFRA-208ENST00000509490 EID1Q9Y6B2 187 aa11.21□□□□□ -0.61
PDGFRA-208ENST00000509490 TTC14Q96N46 770 aa11.21□□□□□ -0.62
PDGFRA-208ENST00000509490 AMOTL2Q9Y2J4 779 aa11.21□□□□□ -0.62
PDGFRA-208ENST00000509490 TTC41PQ6P2S7 1318 aa11.2□□□□□ -0.62
PDGFRA-208ENST00000509490 WDR33Q9C0J8 1336 aaKnown RBP11.2□□□□□ -0.62
PDGFRA-208ENST00000509490 PDIA4P13667 645 aaKnown RBP11.2□□□□□ -0.62
PDGFRA-208ENST00000509490 SYAP1Q96A49 352 aaPredicted RBP11.2□□□□□ -0.62
PDGFRA-208ENST00000509490 SNRKQ9NRH2 765 aa11.2□□□□□ -0.62
PDGFRA-208ENST00000509490 PALD1Q9ULE6 856 aa11.2□□□□□ -0.62
PDGFRA-208ENST00000509490 EXOC6BQ9Y2D4 811 aa11.2□□□□□ -0.62
PDGFRA-208ENST00000509490 HEG1Q9ULI3 1381 aa11.2□□□□□ -0.62
PDGFRA-208ENST00000509490 FER1L4A9Z1Z3 1794 aa11.2□□□□□ -0.62
PDGFRA-208ENST00000509490 MRC1P22897 1456 aa11.2□□□□□ -0.62
PDGFRA-208ENST00000509490 SGSM2O43147 1006 aa11.2□□□□□ -0.62
PDGFRA-208ENST00000509490 HSP90AB4PQ58FF6 505 aa11.2□□□□□ -0.62
PDGFRA-208ENST00000509490 FAM184AQ8NB25 1140 aa11.2□□□□□ -0.62
PDGFRA-208ENST00000509490 ZKSCAN5Q9Y2L8 839 aa11.2□□□□□ -0.62
PDGFRA-208ENST00000509490 ABCC6O95255 1503 aa11.2□□□□□ -0.62
PDGFRA-208ENST00000509490 PLEKHG2Q9H7P9 1386 aa11.19□□□□□ -0.62
PDGFRA-208ENST00000509490 MLECQ14165 292 aa11.19□□□□□ -0.62
PDGFRA-208ENST00000509490 SLIT3O75094 1523 aa11.19□□□□□ -0.62
PDGFRA-208ENST00000509490 PHF14O94880 888 aa11.19□□□□□ -0.62
PDGFRA-208ENST00000509490 AMPHP49418 695 aa11.19□□□□□ -0.62
PDGFRA-208ENST00000509490 MAPK8IP2Q13387 824 aaPredicted RBP11.19□□□□□ -0.62
PDGFRA-208ENST00000509490 FKBP5Q13451 457 aaPredicted RBP11.19□□□□□ -0.62
PDGFRA-208ENST00000509490 LRRFIP2Q9Y608 721 aaKnown RBP11.19□□□□□ -0.62
PDGFRA-208ENST00000509490 MST1RQ04912 1400 aa11.19□□□□□ -0.62
PDGFRA-208ENST00000509490 UBTFL1P0CB47 393 aaPredicted RBP11.19□□□□□ -0.62
PDGFRA-208ENST00000509490 CSPP1Q1MSJ5 1256 aa11.19□□□□□ -0.62
PDGFRA-208ENST00000509490 SLC4A10Q6U841 1118 aa11.19□□□□□ -0.62
PDGFRA-208ENST00000509490 KIF1BPQ96EK5 621 aa11.19□□□□□ -0.62
PDGFRA-208ENST00000509490 TM6SF1Q9BZW5 370 aa11.19□□□□□ -0.62
PDGFRA-208ENST00000509490 MIS18AQ9NYP9 233 aa11.19□□□□□ -0.62
PDGFRA-208ENST00000509490 CCDC39Q9UFE4 941 aa11.19□□□□□ -0.62
PDGFRA-208ENST00000509490 LETM1O95202 739 aaPredicted RBP11.18□□□□□ -0.62
PDGFRA-208ENST00000509490 LSG1Q9H089 658 aaKnown RBP11.18□□□□□ -0.62
PDGFRA-208ENST00000509490 MSNP26038 577 aaKnown RBP11.18□□□□□ -0.62
PDGFRA-208ENST00000509490 ZNF142P52746 1687 aaPredicted RBP11.18□□□□□ -0.62
PDGFRA-208ENST00000509490 BEND3Q5T5X7 828 aa11.17□□□□□ -0.62
PDGFRA-208ENST00000509490 EIF4A1P60842 406 aaKnown RBP11.17□□□□□ -0.62
PDGFRA-208ENST00000509490 RHPN1Q8TCX5 695 aa11.17□□□□□ -0.62
PDGFRA-208ENST00000509490 UTYO14607 1347 aa11.17□□□□□ -0.62
PDGFRA-208ENST00000509490 UNC5CLQ8IV45 518 aa11.16□□□□□ -0.62
PDGFRA-208ENST00000509490 IP6K1Q92551 441 aa11.16□□□□□ -0.62
PDGFRA-208ENST00000509490 ALDH1L1O75891 902 aa11.16□□□□□ -0.62
PDGFRA-208ENST00000509490 NGDNQ8NEJ9 315 aaKnown RBP11.16□□□□□ -0.62
PDGFRA-208ENST00000509490 ALDH8A1Q9H2A2 487 aaPredicted RBP11.16□□□□□ -0.62
PDGFRA-208ENST00000509490 ANO2Q9NQ90 1003 aa11.16□□□□□ -0.62
PDGFRA-208ENST00000509490 NSFL1CQ9UNZ2 370 aaKnown RBP11.16□□□□□ -0.62
PDGFRA-208ENST00000509490 HDAC5Q9UQL6 1122 aa11.16□□□□□ -0.62
PDGFRA-208ENST00000509490 JCADQ9P266 1359 aa11.16□□□□□ -0.62
PDGFRA-208ENST00000509490 TSPY26PQ9H489 355 aa11.16□□□□□ -0.62
PDGFRA-208ENST00000509490 RBM27Q9P2N5 1060 aaKnown RBP11.16□□□□□ -0.62
PDGFRA-208ENST00000509490 PPP1R42Q7Z4L9 355 aa11.15□□□□□ -0.62
PDGFRA-208ENST00000509490 CNTROBQ8N137 903 aa11.15□□□□□ -0.62
PDGFRA-208ENST00000509490 THEMISQ8N1K5 641 aaPredicted RBP11.15□□□□□ -0.62
PDGFRA-208ENST00000509490 SNX14Q9Y5W7 946 aa11.15□□□□□ -0.62
PDGFRA-208ENST00000509490 APBB1O00213 710 aa11.15□□□□□ -0.62
PDGFRA-208ENST00000509490 ADCY9O60503 1353 aa11.15□□□□□ -0.62
PDGFRA-208ENST00000509490 HDGFL1Q5TGJ6 251 aa11.15□□□□□ -0.62
PDGFRA-208ENST00000509490 SYCE3A1L190 88 aa11.14□□□□□ -0.63
PDGFRA-208ENST00000509490 GLRX3O76003 335 aaKnown RBP11.14□□□□□ -0.63
PDGFRA-208ENST00000509490 KIAA1211Q6ZU35 1233 aa11.14□□□□□ -0.63
PDGFRA-208ENST00000509490 MAP7D2Q96T17 732 aa11.14□□□□□ -0.63
PDGFRA-208ENST00000509490 PDCL3Q9H2J4 239 aa11.14□□□□□ -0.63
PDGFRA-208ENST00000509490 NLRP6P59044 892 aa11.14□□□□□ -0.63
PDGFRA-208ENST00000509490 HSP90AA2PQ14568 343 aaPredicted RBP11.14□□□□□ -0.63
PDGFRA-208ENST00000509490 ZSCAN31Q96LW9 406 aaPredicted RBP11.14□□□□□ -0.63
PDGFRA-208ENST00000509490 IL25Q9H293 177 aa11.14□□□□□ -0.63
PDGFRA-208ENST00000509490 LIMCH1Q9UPQ0 1083 aa11.14□□□□□ -0.63
PDGFRA-208ENST00000509490 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.14□□□□□ -0.63
PDGFRA-208ENST00000509490 CCDC171Q6TFL3 1326 aa11.13□□□□□ -0.63
PDGFRA-208ENST00000509490 ZSCAN22P10073 491 aaPredicted RBP11.13□□□□□ -0.63
PDGFRA-208ENST00000509490 GLIPR1L2Q4G1C9 344 aa11.13□□□□□ -0.63
PDGFRA-208ENST00000509490 VPS53Q5VIR6 699 aa11.13□□□□□ -0.63
PDGFRA-208ENST00000509490 C14orf37Q86TY3 774 aa11.13□□□□□ -0.63
PDGFRA-208ENST00000509490 ERC1Q8IUD2 1116 aa11.13□□□□□ -0.63
PDGFRA-208ENST00000509490 DNAAF4Q8WXU2 420 aa11.13□□□□□ -0.63
PDGFRA-208ENST00000509490 COL15A1P39059 1388 aa11.13□□□□□ -0.63
PDGFRA-208ENST00000509490 TRIM6-TRIM34B2RNG4 842 aa11.13□□□□□ -0.63
PDGFRA-208ENST00000509490 CCDC183Q5T5S1 534 aa11.13□□□□□ -0.63
PDGFRA-208ENST00000509490 SH2B1Q9NRF2 756 aaPredicted RBP11.13□□□□□ -0.63
PDGFRA-208ENST00000509490 ATP6V1DQ9Y5K8 247 aa11.13□□□□□ -0.63
PDGFRA-208ENST00000509490 NCLP19338 710 aaKnown RBP11.13□□□□□ -0.63
PDGFRA-208ENST00000509490 UBE2HP62256 183 aa11.13□□□□□ -0.63
PDGFRA-208ENST00000509490 AKAP4Q5JQC9 854 aa11.13□□□□□ -0.63
PDGFRA-208ENST00000509490 RILPL2Q969X0 211 aa11.13□□□□□ -0.63
PDGFRA-208ENST00000509490 SLC26A8Q96RN1 970 aa11.13□□□□□ -0.63
PDGFRA-208ENST00000509490 TRPM3Q9HCF6 1732 aaPredicted RBP11.12□□□□□ -0.63
PDGFRA-208ENST00000509490 USP48Q86UV5 1035 aa11.12□□□□□ -0.63
PDGFRA-208ENST00000509490 RUFY2Q8WXA3 655 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms