RNA–Protein interactions for RNA: ENST00000509101.1

CXCL1-202, Transcript of C-X-C motif chemokine ligand 1, humanhuman

TSL 3

Gene CXCL1, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-202ENST00000509101 IL13P35225 146 aa21.85■■□□□ 1.09
CXCL1-202ENST00000509101 FSTL1Q12841 308 aa21.85■■□□□ 1.09
CXCL1-202ENST00000509101 RRAGCQ9HB90 399 aa21.85■■□□□ 1.09
CXCL1-202ENST00000509101 COL15A1P39059 1388 aa21.85■■□□□ 1.09
CXCL1-202ENST00000509101 RASSF7Q02833 373 aa21.84■■□□□ 1.09
CXCL1-202ENST00000509101 AKAP4Q5JQC9 854 aa21.84■■□□□ 1.09
CXCL1-202ENST00000509101 KLRG1Q96E93 195 aa21.84■■□□□ 1.09
CXCL1-202ENST00000509101 SLC52A2Q9HAB3 445 aa21.83■■□□□ 1.09
CXCL1-202ENST00000509101 SLC39A6Q13433 755 aa21.82■■□□□ 1.08
CXCL1-202ENST00000509101 LGR6Q9HBX8 967 aa21.82■■□□□ 1.08
CXCL1-202ENST00000509101 CLSPNQ9HAW4 1339 aa21.81■■□□□ 1.08
CXCL1-202ENST00000509101 CYP19A1P11511 503 aaPredicted RBP21.81■■□□□ 1.08
CXCL1-202ENST00000509101 ANKRD31Q8N7Z5 1873 aa21.8■■□□□ 1.08
CXCL1-202ENST00000509101 NFIXQ14938 502 aa21.8■■□□□ 1.08
CXCL1-202ENST00000509101 ZBTB1Q9Y2K1 713 aa21.8■■□□□ 1.08
CXCL1-202ENST00000509101 KNSTRNQ9Y448 316 aa21.8■■□□□ 1.08
CXCL1-202ENST00000509101 PCNTO95613 3336 aa21.8■■□□□ 1.08
CXCL1-202ENST00000509101 SCN7AQ01118 1682 aa21.79■■□□□ 1.08
CXCL1-202ENST00000509101 RNMTO43148 476 aaKnown RBP21.79■■□□□ 1.08
CXCL1-202ENST00000509101 JMYQ8N9B5 988 aa21.79■■□□□ 1.08
CXCL1-202ENST00000509101 PCGF6Q9BYE7 350 aa21.79■■□□□ 1.08
CXCL1-202ENST00000509101 NARFQ9UHQ1 456 aa21.79■■□□□ 1.08
CXCL1-202ENST00000509101 COL11A2P13942 1736 aaPredicted RBP21.79■■□□□ 1.08
CXCL1-202ENST00000509101 ZC3H4Q9UPT8 1303 aaKnown RBP21.79■■□□□ 1.08
CXCL1-202ENST00000509101 CARMIL3Q8ND23 1372 aa21.78■■□□□ 1.08
CXCL1-202ENST00000509101 CACNA1SQ13698 1873 aa21.78■■□□□ 1.08
CXCL1-202ENST00000509101 HMOX1P09601 288 aa21.78■■□□□ 1.08
CXCL1-202ENST00000509101 SMC1BQ8NDV3 1235 aa21.77■■□□□ 1.08
CXCL1-202ENST00000509101 PRELPP51888 382 aa21.76■■□□□ 1.07
CXCL1-202ENST00000509101 BCL2L12Q9HB09 334 aa21.76■■□□□ 1.07
CXCL1-202ENST00000509101 DICER1Q9UPY3 1922 aaKnown RBP21.76■■□□□ 1.07
CXCL1-202ENST00000509101 SERPINB2P05120 415 aa21.75■■□□□ 1.07
CXCL1-202ENST00000509101 LMNB1P20700 586 aa21.75■■□□□ 1.07
CXCL1-202ENST00000509101 COL13A1Q5TAT6 717 aaPredicted RBP21.75■■□□□ 1.07
CXCL1-202ENST00000509101 SIPA1L3O60292 1781 aaPredicted RBP21.74■■□□□ 1.07
CXCL1-202ENST00000509101 C2CD5Q86YS7 1000 aa21.74■■□□□ 1.07
CXCL1-202ENST00000509101 TTLL6Q8N841 843 aa21.74■■□□□ 1.07
CXCL1-202ENST00000509101 FER1L6Q2WGJ9 1857 aa21.74■■□□□ 1.07
CXCL1-202ENST00000509101 CANXP27824 592 aaKnown RBP21.73■■□□□ 1.07
CXCL1-202ENST00000509101 AMER1Q5JTC6 1135 aaPredicted RBP21.73■■□□□ 1.07
CXCL1-202ENST00000509101 GLTPD2A6NH11 291 aa21.72■■□□□ 1.07
CXCL1-202ENST00000509101 MTHFSDQ2M296 383 aaKnown RBP21.72■■□□□ 1.07
CXCL1-202ENST00000509101 VSIG10Q8N0Z9 540 aa21.72■■□□□ 1.07
CXCL1-202ENST00000509101 NFKBIEO00221 500 aa21.71■■□□□ 1.07
CXCL1-202ENST00000509101 BICDL1Q6ZP65 573 aa21.71■■□□□ 1.07
CXCL1-202ENST00000509101 H0YIN7 160 aa21.7■■□□□ 1.06
CXCL1-202ENST00000509101 VEGFAP15692 232 aaPredicted RBP21.7■■□□□ 1.06
CXCL1-202ENST00000509101 BCORQ6W2J9 1755 aa21.69■■□□□ 1.06
CXCL1-202ENST00000509101 ARFGEF2Q9Y6D5 1785 aa21.69■■□□□ 1.06
CXCL1-202ENST00000509101 TTC5Q8N0Z6 440 aa21.69■■□□□ 1.06
CXCL1-202ENST00000509101 CAPN15O75808 1086 aa21.68■■□□□ 1.06
CXCL1-202ENST00000509101 EIF5P55010 431 aaKnown RBP21.67■■□□□ 1.06
CXCL1-202ENST00000509101 DIAPH1O60610 1272 aaKnown RBP21.66■■□□□ 1.06
CXCL1-202ENST00000509101 STARD3NLO95772 234 aa21.66■■□□□ 1.06
CXCL1-202ENST00000509101 TBC1D9BQ66K14 1250 aa21.66■■□□□ 1.06
CXCL1-202ENST00000509101 ZNF622Q969S3 477 aaKnown RBP eCLIP21.66■■□□□ 1.06
CXCL1-202ENST00000509101 ZNF219Q9P2Y4 722 aaPredicted RBP21.66■■□□□ 1.06
CXCL1-202ENST00000509101 ZNF330Q9Y3S2 320 aaPredicted RBP21.66■■□□□ 1.06
CXCL1-202ENST00000509101 COL3A1P02461 1466 aaPredicted RBP21.65■■□□□ 1.06
CXCL1-202ENST00000509101 A0A087WZG4 1122 aa21.65■■□□□ 1.06
CXCL1-202ENST00000509101 TNS4Q8IZW8 715 aa21.65■■□□□ 1.06
CXCL1-202ENST00000509101 SLX4Q8IY92 1834 aa21.64■■□□□ 1.06
CXCL1-202ENST00000509101 HEG1Q9ULI3 1381 aa21.64■■□□□ 1.06
CXCL1-202ENST00000509101 KIF7Q2M1P5 1343 aa21.64■■□□□ 1.05
CXCL1-202ENST00000509101 CCDC24Q8N4L8 307 aa21.64■■□□□ 1.05
CXCL1-202ENST00000509101 POTECB2RU33 542 aa21.63■■□□□ 1.05
CXCL1-202ENST00000509101 C21orf2O43822 256 aa21.63■■□□□ 1.05
CXCL1-202ENST00000509101 HSPA1AP0DMV8 641 aaKnown RBP21.63■■□□□ 1.05
CXCL1-202ENST00000509101 HSPA1BP0DMV9 641 aaKnown RBP21.63■■□□□ 1.05
CXCL1-202ENST00000509101 CC2D1BQ5T0F9 858 aaKnown RBP21.63■■□□□ 1.05
CXCL1-202ENST00000509101 PRR5LQ6MZQ0 368 aa21.63■■□□□ 1.05
CXCL1-202ENST00000509101 ZNF496Q96IT1 587 aaPredicted RBP21.63■■□□□ 1.05
CXCL1-202ENST00000509101 PDE6BP35913 854 aa21.62■■□□□ 1.05
CXCL1-202ENST00000509101 TEFQ10587 303 aa21.62■■□□□ 1.05
CXCL1-202ENST00000509101 TBC1D2BQ9UPU7 963 aa21.62■■□□□ 1.05
CXCL1-202ENST00000509101 ERFEQ4G0M1 354 aa21.61■■□□□ 1.05
CXCL1-202ENST00000509101 DPY19L2Q6NUT2 758 aa21.61■■□□□ 1.05
CXCL1-202ENST00000509101 ZNF790Q6PG37 636 aa21.61■■□□□ 1.05
CXCL1-202ENST00000509101 BRIP1Q9BX63 1249 aa21.61■■□□□ 1.05
CXCL1-202ENST00000509101 PDZRN3Q9UPQ7 1066 aa21.6■■□□□ 1.05
CXCL1-202ENST00000509101 U2SURPO15042 1029 aaKnown RBP21.59■■□□□ 1.05
CXCL1-202ENST00000509101 GNAT3A8MTJ3 354 aa21.58■■□□□ 1.05
CXCL1-202ENST00000509101 IL6STP40189 918 aaPredicted RBP21.58■■□□□ 1.05
CXCL1-202ENST00000509101 IL17REQ8NFR9 667 aa21.58■■□□□ 1.05
CXCL1-202ENST00000509101 TEX13AQ9BXU3 409 aaPredicted RBP21.58■■□□□ 1.05
CXCL1-202ENST00000509101 NPHP1O15259 732 aa21.57■■□□□ 1.04
CXCL1-202ENST00000509101 CNGB1Q14028 1251 aaPredicted RBP21.57■■□□□ 1.04
CXCL1-202ENST00000509101 CNBD1Q8NA66 436 aa21.57■■□□□ 1.04
CXCL1-202ENST00000509101 GAS2L2Q8NHY3 880 aa21.57■■□□□ 1.04
CXCL1-202ENST00000509101 TAOK3Q9H2K8 898 aa21.57■■□□□ 1.04
CXCL1-202ENST00000509101 LTBP3Q9NS15 1303 aa21.56■■□□□ 1.04
CXCL1-202ENST00000509101 PER1O15534 1290 aaPredicted RBP21.56■■□□□ 1.04
CXCL1-202ENST00000509101 A1BGP04217 495 aa21.56■■□□□ 1.04
CXCL1-202ENST00000509101 NPM2Q86SE8 214 aaKnown RBP21.56■■□□□ 1.04
CXCL1-202ENST00000509101 FMNL2Q96PY5 1086 aa21.56■■□□□ 1.04
CXCL1-202ENST00000509101 SCN4AP35499 1836 aa21.55■■□□□ 1.04
CXCL1-202ENST00000509101 CAMTA2O94983 1202 aa21.55■■□□□ 1.04
CXCL1-202ENST00000509101 ST5P78524 1137 aa21.55■■□□□ 1.04
CXCL1-202ENST00000509101 PRPF40BQ6NWY9 871 aaKnown RBP21.55■■□□□ 1.04
CXCL1-202ENST00000509101 CCER1Q8TC90 406 aaPredicted RBP21.55■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms