RNA–Protein interactions for RNA: ENST00000508854.1

SH3D21-206, Transcript of SH3 domain containing 21, humanhuman

TSL 5

Gene SH3D21, Length 1,134 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21-206ENST00000508854 SMC1BQ8NDV3 1235 aa13.57□□□□□ -0.24
SH3D21-206ENST00000508854 KLRG1Q96E93 195 aa13.57□□□□□ -0.24
SH3D21-206ENST00000508854 PDZRN3Q9UPQ7 1066 aa13.57□□□□□ -0.24
SH3D21-206ENST00000508854 KCPQ6ZWJ8 1503 aa13.56□□□□□ -0.24
SH3D21-206ENST00000508854 A0A087WZG4 1122 aa13.56□□□□□ -0.24
SH3D21-206ENST00000508854 LMNB1P20700 586 aa13.56□□□□□ -0.24
SH3D21-206ENST00000508854 TTLL6Q8N841 843 aa13.56□□□□□ -0.24
SH3D21-206ENST00000508854 LGR6Q9HBX8 967 aa13.56□□□□□ -0.24
SH3D21-206ENST00000508854 WDR90Q96KV7 1748 aa13.56□□□□□ -0.24
SH3D21-206ENST00000508854 H0YIN7 160 aa13.55□□□□□ -0.24
SH3D21-206ENST00000508854 SERPINB2P05120 415 aa13.55□□□□□ -0.24
SH3D21-206ENST00000508854 VEGFAP15692 232 aaPredicted RBP13.55□□□□□ -0.24
SH3D21-206ENST00000508854 NFIXQ14938 502 aa13.55□□□□□ -0.24
SH3D21-206ENST00000508854 TTC5Q8N0Z6 440 aa13.55□□□□□ -0.24
SH3D21-206ENST00000508854 TEX13AQ9BXU3 409 aaPredicted RBP13.55□□□□□ -0.24
SH3D21-206ENST00000508854 TNRC6CQ9HCJ0 1690 aaKnown RBP13.55□□□□□ -0.24
SH3D21-206ENST00000508854 COL15A1P39059 1388 aa13.55□□□□□ -0.24
SH3D21-206ENST00000508854 DIAPH1O60610 1272 aaKnown RBP13.54□□□□□ -0.24
SH3D21-206ENST00000508854 SLC39A6Q13433 755 aa13.54□□□□□ -0.24
SH3D21-206ENST00000508854 AMER1Q5JTC6 1135 aaPredicted RBP13.54□□□□□ -0.24
SH3D21-206ENST00000508854 JMYQ8N9B5 988 aa13.54□□□□□ -0.24
SH3D21-206ENST00000508854 SBF1O95248 1867 aa13.54□□□□□ -0.24
SH3D21-206ENST00000508854 MRC1P22897 1456 aa13.54□□□□□ -0.24
SH3D21-206ENST00000508854 ADAMTS7Q9UKP4 1686 aa13.53□□□□□ -0.24
SH3D21-206ENST00000508854 GLTPD2A6NH11 291 aa13.53□□□□□ -0.24
SH3D21-206ENST00000508854 HMOX1P09601 288 aa13.53□□□□□ -0.24
SH3D21-206ENST00000508854 DPY19L2Q6NUT2 758 aa13.53□□□□□ -0.24
SH3D21-206ENST00000508854 NPM2Q86SE8 214 aaKnown RBP13.53□□□□□ -0.24
SH3D21-206ENST00000508854 C2CD5Q86YS7 1000 aa13.53□□□□□ -0.24
SH3D21-206ENST00000508854 PDE6BP35913 854 aa13.52□□□□□ -0.25
SH3D21-206ENST00000508854 MTHFSDQ2M296 383 aaKnown RBP13.52□□□□□ -0.25
SH3D21-206ENST00000508854 ZBTB1Q9Y2K1 713 aa13.52□□□□□ -0.25
SH3D21-206ENST00000508854 AFDNP55196 1824 aaKnown RBP13.51□□□□□ -0.25
SH3D21-206ENST00000508854 NRXN2Q9P2S2 1712 aa13.51□□□□□ -0.25
SH3D21-206ENST00000508854 CANXP27824 592 aaKnown RBP13.51□□□□□ -0.25
SH3D21-206ENST00000508854 TEFQ10587 303 aa13.51□□□□□ -0.25
SH3D21-206ENST00000508854 EIF5P55010 431 aaKnown RBP13.5□□□□□ -0.25
SH3D21-206ENST00000508854 RASSF7Q02833 373 aa13.5□□□□□ -0.25
SH3D21-206ENST00000508854 GAS2L2Q8NHY3 880 aa13.5□□□□□ -0.25
SH3D21-206ENST00000508854 BRIP1Q9BX63 1249 aa13.5□□□□□ -0.25
SH3D21-206ENST00000508854 BCL2L12Q9HB09 334 aa13.5□□□□□ -0.25
SH3D21-206ENST00000508854 VIRMAQ69YN4 1812 aaKnown RBP13.49□□□□□ -0.25
SH3D21-206ENST00000508854 GNAT3A8MTJ3 354 aa13.49□□□□□ -0.25
SH3D21-206ENST00000508854 CCER1Q8TC90 406 aaPredicted RBP13.49□□□□□ -0.25
SH3D21-206ENST00000508854 DLEC1Q9Y238 1755 aa13.49□□□□□ -0.25
SH3D21-206ENST00000508854 NPHP1O15259 732 aa13.48□□□□□ -0.25
SH3D21-206ENST00000508854 IL6STP40189 918 aaPredicted RBP13.48□□□□□ -0.25
SH3D21-206ENST00000508854 HTRA3P83110 453 aa13.48□□□□□ -0.25
SH3D21-206ENST00000508854 ZNF790Q6PG37 636 aa13.48□□□□□ -0.25
SH3D21-206ENST00000508854 BICDL1Q6ZP65 573 aa13.48□□□□□ -0.25
SH3D21-206ENST00000508854 ZNF622Q969S3 477 aaKnown RBP eCLIP13.48□□□□□ -0.253e-8■□□□□ 10.9
SH3D21-206ENST00000508854 SOGA3Q5TF21 947 aa13.47□□□□□ -0.25
SH3D21-206ENST00000508854 FMNL2Q96PY5 1086 aa13.47□□□□□ -0.25
SH3D21-206ENST00000508854 SETDB2Q96T68 719 aa13.47□□□□□ -0.25
SH3D21-206ENST00000508854 UBR2Q8IWV8 1755 aa13.47□□□□□ -0.25
SH3D21-206ENST00000508854 CARMIL3Q8ND23 1372 aa13.46□□□□□ -0.25
SH3D21-206ENST00000508854 HEG1Q9ULI3 1381 aa13.46□□□□□ -0.25
SH3D21-206ENST00000508854 KIF7Q2M1P5 1343 aa13.46□□□□□ -0.25
SH3D21-206ENST00000508854 NFKBIEO00221 500 aa13.46□□□□□ -0.25
SH3D21-206ENST00000508854 U2SURPO15042 1029 aaKnown RBP13.46□□□□□ -0.25
SH3D21-206ENST00000508854 PER1O15534 1290 aaPredicted RBP13.46□□□□□ -0.25
SH3D21-206ENST00000508854 ERFEQ4G0M1 354 aa13.46□□□□□ -0.25
SH3D21-206ENST00000508854 CC2D1BQ5T0F9 858 aaKnown RBP13.46□□□□□ -0.25
SH3D21-206ENST00000508854 TBC1D9BQ66K14 1250 aa13.46□□□□□ -0.25
SH3D21-206ENST00000508854 CNKSR1Q969H4 720 aa13.46□□□□□ -0.25
SH3D21-206ENST00000508854 ST5P78524 1137 aa13.45□□□□□ -0.26
SH3D21-206ENST00000508854 ZNF496Q96IT1 587 aaPredicted RBP13.45□□□□□ -0.26
SH3D21-206ENST00000508854 ZNF330Q9Y3S2 320 aaPredicted RBP13.45□□□□□ -0.26
SH3D21-206ENST00000508854 NPC1L1Q9UHC9 1359 aa13.45□□□□□ -0.26
SH3D21-206ENST00000508854 CCDC88AQ3V6T2 1871 aa13.44□□□□□ -0.26
SH3D21-206ENST00000508854 LTBP3Q9NS15 1303 aa13.44□□□□□ -0.26
SH3D21-206ENST00000508854 C21orf2O43822 256 aa13.44□□□□□ -0.26
SH3D21-206ENST00000508854 COL13A1Q5TAT6 717 aaPredicted RBP13.44□□□□□ -0.26
SH3D21-206ENST00000508854 STYK1Q6J9G0 422 aa13.44□□□□□ -0.26
SH3D21-206ENST00000508854 PRR5LQ6MZQ0 368 aa13.44□□□□□ -0.26
SH3D21-206ENST00000508854 TNS4Q8IZW8 715 aa13.44□□□□□ -0.26
SH3D21-206ENST00000508854 CNBD1Q8NA66 436 aa13.44□□□□□ -0.26
SH3D21-206ENST00000508854 IL17REQ8NFR9 667 aa13.44□□□□□ -0.26
SH3D21-206ENST00000508854 TAOK3Q9H2K8 898 aa13.44□□□□□ -0.26
SH3D21-206ENST00000508854 TBC1D2BQ9UPU7 963 aa13.44□□□□□ -0.26
SH3D21-206ENST00000508854 TIAM2Q8IVF5 1701 aa13.44□□□□□ -0.26
SH3D21-206ENST00000508854 BTBD11A6QL63 1104 aa13.43□□□□□ -0.26
SH3D21-206ENST00000508854 PRELPP51888 382 aa13.43□□□□□ -0.26
SH3D21-206ENST00000508854 CFAP53Q96M91 514 aa13.43□□□□□ -0.26
SH3D21-206ENST00000508854 ZNF652Q9Y2D9 606 aa13.43□□□□□ -0.26
SH3D21-206ENST00000508854 PCNTO95613 3336 aa13.43□□□□□ -0.26
SH3D21-206ENST00000508854 CLEC4GQ6UXB4 293 aa13.42□□□□□ -0.26
SH3D21-206ENST00000508854 MASTLQ96GX5 879 aa13.42□□□□□ -0.26
SH3D21-206ENST00000508854 NUDCQ9Y266 331 aa13.42□□□□□ -0.26
SH3D21-206ENST00000508854 DICER1Q9UPY3 1922 aaKnown RBP13.41□□□□□ -0.26
SH3D21-206ENST00000508854 IQCA1LA6NCM1 817 aa13.41□□□□□ -0.26
SH3D21-206ENST00000508854 RGL2O15211 777 aa13.41□□□□□ -0.26
SH3D21-206ENST00000508854 CAMTA2O94983 1202 aa13.41□□□□□ -0.26
SH3D21-206ENST00000508854 SRGNP10124 158 aa13.41□□□□□ -0.26
SH3D21-206ENST00000508854 CHADLQ6NUI6 762 aa13.41□□□□□ -0.26
SH3D21-206ENST00000508854 DZIP3Q86Y13 1208 aaKnown RBP13.41□□□□□ -0.26
SH3D21-206ENST00000508854 ZNF219Q9P2Y4 722 aaPredicted RBP13.41□□□□□ -0.26
SH3D21-206ENST00000508854 SCN7AQ01118 1682 aa13.4□□□□□ -0.26
SH3D21-206ENST00000508854 FER1L6Q2WGJ9 1857 aa13.4□□□□□ -0.26
SH3D21-206ENST00000508854 POTECB2RU33 542 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms