RNA–Protein interactions for RNA: ENST00000508828.1

SPSB4-204, Transcript of splA/ryanodine receptor domain and SOCS box containing 4, humanhuman

TSL 3

Gene SPSB4, Length 537 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB4-204ENST00000508828 PHAXQ9H814 394 aaKnown RBP16.63■□□□□ 0.25
SPSB4-204ENST00000508828 CCDC9Q9Y3X0 531 aaKnown RBP16.63■□□□□ 0.25
SPSB4-204ENST00000508828 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.62■□□□□ 0.25
SPSB4-204ENST00000508828 KCPQ6ZWJ8 1503 aa16.62■□□□□ 0.25
SPSB4-204ENST00000508828 BARGINQ6ZT62 677 aa16.62■□□□□ 0.25
SPSB4-204ENST00000508828 C1orf115Q9H7X2 142 aa16.62■□□□□ 0.25
SPSB4-204ENST00000508828 PRAMEF22A3QJZ6 481 aa16.61■□□□□ 0.25
SPSB4-204ENST00000508828 DDX58O95786 925 aaKnown RBP16.61■□□□□ 0.25
SPSB4-204ENST00000508828 DDB1Q16531 1140 aa16.61■□□□□ 0.25
SPSB4-204ENST00000508828 NGLY1Q96IV0 654 aa16.61■□□□□ 0.25
SPSB4-204ENST00000508828 C8orf37Q96NL8 207 aa16.61■□□□□ 0.25
SPSB4-204ENST00000508828 ERBB4Q15303 1308 aa16.61■□□□□ 0.25
SPSB4-204ENST00000508828 ITGB4P16144 1822 aa16.61■□□□□ 0.25
SPSB4-204ENST00000508828 ATP10DQ9P241 1426 aa16.61■□□□□ 0.25
SPSB4-204ENST00000508828 GNAI3P08754 354 aa16.6■□□□□ 0.25
SPSB4-204ENST00000508828 VPS72Q15906 364 aa16.6■□□□□ 0.25
SPSB4-204ENST00000508828 SMC5Q8IY18 1101 aa16.6■□□□□ 0.25
SPSB4-204ENST00000508828 DNAAF4Q8WXU2 420 aa16.6■□□□□ 0.25
SPSB4-204ENST00000508828 MEIS3Q99687 375 aa16.6■□□□□ 0.25
SPSB4-204ENST00000508828 PDZRN3Q9UPQ7 1066 aa16.6■□□□□ 0.25
SPSB4-204ENST00000508828 ANXA1P04083 346 aa16.59■□□□□ 0.25
SPSB4-204ENST00000508828 RPAP2Q8IXW5 612 aaPredicted RBP16.59■□□□□ 0.25
SPSB4-204ENST00000508828 GCC1Q96CN9 775 aa16.59■□□□□ 0.25
SPSB4-204ENST00000508828 SRCIN1Q9C0H9 1055 aa16.59■□□□□ 0.25
SPSB4-204ENST00000508828 DOT1LQ8TEK3 1739 aa16.59■□□□□ 0.25
SPSB4-204ENST00000508828 RGS3P49796 1198 aa16.58■□□□□ 0.24
SPSB4-204ENST00000508828 PROSER3Q2NL68 480 aa16.58■□□□□ 0.24
SPSB4-204ENST00000508828 KSR2Q6VAB6 950 aa16.58■□□□□ 0.24
SPSB4-204ENST00000508828 FNBP4Q8N3X1 1017 aaPredicted RBP16.58■□□□□ 0.24
SPSB4-204ENST00000508828 ANKRD44Q8N8A2 993 aa16.58■□□□□ 0.24
SPSB4-204ENST00000508828 ADCY9O60503 1353 aa16.58■□□□□ 0.24
SPSB4-204ENST00000508828 BCL9LQ86UU0 1499 aa16.57■□□□□ 0.24
SPSB4-204ENST00000508828 PI4KAP2A4QPH2 592 aa16.57■□□□□ 0.24
SPSB4-204ENST00000508828 GNAI2P04899 355 aa16.57■□□□□ 0.24
SPSB4-204ENST00000508828 PDIA6Q15084 440 aa16.57■□□□□ 0.24
SPSB4-204ENST00000508828 PI4KAP1Q8N8J0 262 aa16.57■□□□□ 0.24
SPSB4-204ENST00000508828 BCL9O00512 1426 aa16.56■□□□□ 0.24
SPSB4-204ENST00000508828 HMMRO75330 724 aa16.56■□□□□ 0.24
SPSB4-204ENST00000508828 CEP85Q6P2H3 762 aa16.56■□□□□ 0.24
SPSB4-204ENST00000508828 SKAP1Q86WV1 359 aa16.56■□□□□ 0.24
SPSB4-204ENST00000508828 USP16Q9Y5T5 823 aa16.56■□□□□ 0.24
SPSB4-204ENST00000508828 ALDH1L1O75891 902 aa16.55■□□□□ 0.24
SPSB4-204ENST00000508828 MYL6BP14649 208 aa16.55■□□□□ 0.24
SPSB4-204ENST00000508828 BEND3Q5T5X7 828 aa16.55■□□□□ 0.24
SPSB4-204ENST00000508828 PIGBQ92521 554 aa16.55■□□□□ 0.24
SPSB4-204ENST00000508828 USP21Q9UK80 565 aa16.55■□□□□ 0.24
SPSB4-204ENST00000508828 MAP3K2Q9Y2U5 619 aa16.55■□□□□ 0.24
SPSB4-204ENST00000508828 UBTFL1P0CB47 393 aaPredicted RBP16.54■□□□□ 0.24
SPSB4-204ENST00000508828 VSIG10Q8N0Z9 540 aa16.54■□□□□ 0.24
SPSB4-204ENST00000508828 TEX13AQ9BXU3 409 aaPredicted RBP16.54■□□□□ 0.24
SPSB4-204ENST00000508828 PTCD1O75127 700 aaKnown RBP16.53■□□□□ 0.24
SPSB4-204ENST00000508828 AIMP1Q12904 312 aaKnown RBP16.53■□□□□ 0.24
SPSB4-204ENST00000508828 RIC3Q7Z5B4 369 aa16.53■□□□□ 0.24
SPSB4-204ENST00000508828 SIRT2Q8IXJ6 389 aa16.53■□□□□ 0.24
SPSB4-204ENST00000508828 XAGE3Q8WTP9 111 aa16.53■□□□□ 0.24
SPSB4-204ENST00000508828 HDAC5Q9UQL6 1122 aa16.53■□□□□ 0.24
SPSB4-204ENST00000508828 IBTKQ9P2D0 1353 aaPredicted RBP16.52■□□□□ 0.24
SPSB4-204ENST00000508828 AFF2P51816 1311 aa16.52■□□□□ 0.24
SPSB4-204ENST00000508828 NUCB1Q02818 461 aa16.52■□□□□ 0.24
SPSB4-204ENST00000508828 NEXNQ0ZGT2 675 aa16.52■□□□□ 0.24
SPSB4-204ENST00000508828 ATG3Q9NT62 314 aa16.52■□□□□ 0.24
SPSB4-204ENST00000508828 RBM19Q9Y4C8 960 aaKnown RBP16.52■□□□□ 0.24
SPSB4-204ENST00000508828 RXRBP28702 533 aa16.51■□□□□ 0.23
SPSB4-204ENST00000508828 FAM98CQ17RN3 349 aaKnown RBP16.51■□□□□ 0.23
SPSB4-204ENST00000508828 COPS6Q7L5N1 327 aa16.51■□□□□ 0.23
SPSB4-204ENST00000508828 LRP10Q7Z4F1 713 aa16.51■□□□□ 0.23
SPSB4-204ENST00000508828 MARCH10Q8NA82 808 aaPredicted RBP16.51■□□□□ 0.23
SPSB4-204ENST00000508828 LINS1Q8NG48 757 aa16.51■□□□□ 0.23
SPSB4-204ENST00000508828 SYTL4Q96C24 671 aaPredicted RBP16.51■□□□□ 0.23
SPSB4-204ENST00000508828 USP44Q9H0E7 712 aa16.51■□□□□ 0.23
SPSB4-204ENST00000508828 ASAP1Q9ULH1 1129 aa16.51■□□□□ 0.23
SPSB4-204ENST00000508828 ARFGEF2Q9Y6D5 1785 aa16.51■□□□□ 0.23
SPSB4-204ENST00000508828 THSD7AQ9UPZ6 1657 aa16.5■□□□□ 0.23
SPSB4-204ENST00000508828 PDE4AP27815 886 aa16.5■□□□□ 0.23
SPSB4-204ENST00000508828 CHD1LQ86WJ1 897 aa16.5■□□□□ 0.23
SPSB4-204ENST00000508828 DCTPP1Q9H773 170 aa16.5■□□□□ 0.23
SPSB4-204ENST00000508828 ZBTB47Q9UFB7 747 aaPredicted RBP16.5■□□□□ 0.23
SPSB4-204ENST00000508828 PRIM1P49642 420 aaKnown RBP16.49■□□□□ 0.23
SPSB4-204ENST00000508828 FAM161AQ3B820 660 aa16.49■□□□□ 0.23
SPSB4-204ENST00000508828 ANKRD45Q5TZF3 282 aa16.49■□□□□ 0.23
SPSB4-204ENST00000508828 RBM42Q9BTD8 480 aaKnown RBP16.49■□□□□ 0.23
SPSB4-204ENST00000508828 METTL22Q9BUU2 404 aaPredicted RBP16.49■□□□□ 0.23
SPSB4-204ENST00000508828 LRRFIP2Q9Y608 721 aaKnown RBP16.49■□□□□ 0.23
SPSB4-204ENST00000508828 A0A0G2JS52 829 aa16.48■□□□□ 0.23
SPSB4-204ENST00000508828 STARD3NLO95772 234 aa16.48■□□□□ 0.23
SPSB4-204ENST00000508828 ATP8B2P98198 1209 aa16.48■□□□□ 0.23
SPSB4-204ENST00000508828 MYT1Q01538 1121 aa16.48■□□□□ 0.23
SPSB4-204ENST00000508828 ANKRD13DQ6ZTN6 518 aa16.48■□□□□ 0.23
SPSB4-204ENST00000508828 BACH2Q9BYV9 841 aa16.48■□□□□ 0.23
SPSB4-204ENST00000508828 C9orf78Q9NZ63 289 aaPredicted RBP16.48■□□□□ 0.23
SPSB4-204ENST00000508828 KAT6BQ8WYB5 2073 aa16.47■□□□□ 0.23
SPSB4-204ENST00000508828 NBPF26B4DH59 902 aa16.47■□□□□ 0.23
SPSB4-204ENST00000508828 PIP4K2AP48426 406 aaPredicted RBP16.47■□□□□ 0.23
SPSB4-204ENST00000508828 NBPF14Q5TI25 921 aa16.47■□□□□ 0.23
SPSB4-204ENST00000508828 NBPF10Q6P3W6 841 aaKnown RBP16.47■□□□□ 0.23
SPSB4-204ENST00000508828 DNAJC10Q8IXB1 793 aa16.47■□□□□ 0.23
SPSB4-204ENST00000508828 NBPF15Q8N660 670 aa16.47■□□□□ 0.23
SPSB4-204ENST00000508828 PLBD2Q8NHP8 589 aa16.47■□□□□ 0.23
SPSB4-204ENST00000508828 LNPKQ9C0E8 428 aa16.47■□□□□ 0.23
SPSB4-204ENST00000508828 TJP1Q07157 1748 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms