RNA–Protein interactions for RNA: ENST00000508736.1

PRPF40B-203, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,861 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-203ENST00000508736 SLC52A2Q9HAB3 445 aa14.34□□□□□ -0.11
PRPF40B-203ENST00000508736 KCNQ3O43525 872 aa14.33□□□□□ -0.11
PRPF40B-203ENST00000508736 HMMRO75330 724 aa14.33□□□□□ -0.11
PRPF40B-203ENST00000508736 SLC4A10Q6U841 1118 aa14.33□□□□□ -0.11
PRPF40B-203ENST00000508736 ANTXR1Q9H6X2 564 aa14.33□□□□□ -0.11
PRPF40B-203ENST00000508736 DBF4Q9UBU7 674 aaPredicted RBP14.33□□□□□ -0.11
PRPF40B-203ENST00000508736 LARP1Q6PKG0 1096 aaKnown RBP14.33□□□□□ -0.12
PRPF40B-203ENST00000508736 COL14A1Q05707 1796 aaKnown RBP14.33□□□□□ -0.12
PRPF40B-203ENST00000508736 GNAI2P04899 355 aa14.32□□□□□ -0.12
PRPF40B-203ENST00000508736 TOM1L2Q6ZVM7 507 aa14.32□□□□□ -0.12
PRPF40B-203ENST00000508736 FNBP4Q8N3X1 1017 aaPredicted RBP14.32□□□□□ -0.12
PRPF40B-203ENST00000508736 NECTIN2Q92692 538 aa14.32□□□□□ -0.12
PRPF40B-203ENST00000508736 USP21Q9UK80 565 aa14.31□□□□□ -0.12
PRPF40B-203ENST00000508736 AFF2P51816 1311 aa14.31□□□□□ -0.12
PRPF40B-203ENST00000508736 CYP27B1O15528 508 aa14.31□□□□□ -0.12
PRPF40B-203ENST00000508736 CDC45O75419 566 aa14.31□□□□□ -0.12
PRPF40B-203ENST00000508736 EIF2S2P20042 333 aaKnown RBP14.31□□□□□ -0.12
PRPF40B-203ENST00000508736 ZNF790Q6PG37 636 aa14.31□□□□□ -0.12
PRPF40B-203ENST00000508736 UNC5CLQ8IV45 518 aa14.31□□□□□ -0.12
PRPF40B-203ENST00000508736 CARD10Q9BWT7 1032 aa14.31□□□□□ -0.12
PRPF40B-203ENST00000508736 PHAXQ9H814 394 aaKnown RBP14.31□□□□□ -0.12
PRPF40B-203ENST00000508736 CHPF2Q9P2E5 772 aa14.31□□□□□ -0.12
PRPF40B-203ENST00000508736 CCDC9Q9Y3X0 531 aaKnown RBP14.3□□□□□ -0.12
PRPF40B-203ENST00000508736 SNX21Q969T3 373 aa14.29□□□□□ -0.12
PRPF40B-203ENST00000508736 CHMP5Q9NZZ3 219 aa14.29□□□□□ -0.12
PRPF40B-203ENST00000508736 SLIT2O94813 1529 aa14.29□□□□□ -0.12
PRPF40B-203ENST00000508736 PCDH11XQ9BZA7 1347 aa14.29□□□□□ -0.12
PRPF40B-203ENST00000508736 PCDH11YQ9BZA8 1340 aa14.29□□□□□ -0.12
PRPF40B-203ENST00000508736 IBTKQ9P2D0 1353 aaPredicted RBP14.29□□□□□ -0.12
PRPF40B-203ENST00000508736 SRCIN1Q9C0H9 1055 aa14.29□□□□□ -0.12
PRPF40B-203ENST00000508736 HYPKQ9NX55 129 aa14.29□□□□□ -0.12
PRPF40B-203ENST00000508736 PLCH1Q4KWH8 1693 aa14.28□□□□□ -0.12
PRPF40B-203ENST00000508736 TBC1D9Q6ZT07 1266 aa14.28□□□□□ -0.12
PRPF40B-203ENST00000508736 NFATC2IPQ8NCF5 419 aa14.28□□□□□ -0.12
PRPF40B-203ENST00000508736 DNAAF4Q8WXU2 420 aa14.28□□□□□ -0.12
PRPF40B-203ENST00000508736 USP44Q9H0E7 712 aa14.28□□□□□ -0.12
PRPF40B-203ENST00000508736 BCL9LQ86UU0 1499 aa14.28□□□□□ -0.12
PRPF40B-203ENST00000508736 ZCRB1Q8TBF4 217 aaKnown RBP14.27□□□□□ -0.12
PRPF40B-203ENST00000508736 DDX21Q9NR30 783 aaKnown RBP eCLIP14.27□□□□□ -0.12
PRPF40B-203ENST00000508736 ATP8B2P98198 1209 aa14.27□□□□□ -0.13
PRPF40B-203ENST00000508736 NKX1-1Q15270 411 aaPredicted RBP14.27□□□□□ -0.13
PRPF40B-203ENST00000508736 BEND3Q5T5X7 828 aa14.27□□□□□ -0.13
PRPF40B-203ENST00000508736 PLEKHM2Q8IWE5 1019 aa14.27□□□□□ -0.13
PRPF40B-203ENST00000508736 ADCY9O60503 1353 aa14.26□□□□□ -0.13
PRPF40B-203ENST00000508736 PI4KAP2A4QPH2 592 aa14.26□□□□□ -0.13
PRPF40B-203ENST00000508736 IL2RBP14784 551 aa14.26□□□□□ -0.13
PRPF40B-203ENST00000508736 TTC22Q5TAA0 569 aa14.26□□□□□ -0.13
PRPF40B-203ENST00000508736 PI4KAP1Q8N8J0 262 aa14.26□□□□□ -0.13
PRPF40B-203ENST00000508736 ERVV-2B6SEH9 535 aa14.25□□□□□ -0.13
PRPF40B-203ENST00000508736 ALDH1L1O75891 902 aa14.25□□□□□ -0.13
PRPF40B-203ENST00000508736 UBTFL1P0CB47 393 aaPredicted RBP14.25□□□□□ -0.13
PRPF40B-203ENST00000508736 VPS72Q15906 364 aa14.25□□□□□ -0.13
PRPF40B-203ENST00000508736 CASC1Q6TDU7 716 aa14.25□□□□□ -0.13
PRPF40B-203ENST00000508736 KSR2Q6VAB6 950 aa14.25□□□□□ -0.13
PRPF40B-203ENST00000508736 TTC5Q8N0Z6 440 aa14.25□□□□□ -0.13
PRPF40B-203ENST00000508736 QTRT2Q9H974 415 aaKnown RBP14.25□□□□□ -0.13
PRPF40B-203ENST00000508736 NWD2Q9ULI1 1742 aa14.24□□□□□ -0.13
PRPF40B-203ENST00000508736 C5P01031 1676 aa14.24□□□□□ -0.13
PRPF40B-203ENST00000508736 DDX58O95786 925 aaKnown RBP14.24□□□□□ -0.13
PRPF40B-203ENST00000508736 SNRPA1P09661 255 aaKnown RBP14.24□□□□□ -0.13
PRPF40B-203ENST00000508736 CABP4P57796 275 aa14.24□□□□□ -0.13
PRPF40B-203ENST00000508736 PDIA6Q15084 440 aa14.24□□□□□ -0.13
PRPF40B-203ENST00000508736 FMNL2Q96PY5 1086 aa14.24□□□□□ -0.13
PRPF40B-203ENST00000508736 TRPC5Q9UL62 973 aaPredicted RBP14.24□□□□□ -0.13
PRPF40B-203ENST00000508736 HDAC5Q9UQL6 1122 aa14.24□□□□□ -0.13
PRPF40B-203ENST00000508736 SPATA31A1Q5TZJ5 1347 aa14.24□□□□□ -0.13
PRPF40B-203ENST00000508736 SPATA31A5Q5VU36 1347 aa14.24□□□□□ -0.13
PRPF40B-203ENST00000508736 SPATA31A7Q8IWB4 1347 aa14.24□□□□□ -0.13
PRPF40B-203ENST00000508736 GSPT1P15170 499 aaKnown RBP14.23□□□□□ -0.13
PRPF40B-203ENST00000508736 SLC39A6Q13433 755 aa14.23□□□□□ -0.13
PRPF40B-203ENST00000508736 SPRYD3Q8NCJ5 442 aa14.23□□□□□ -0.13
PRPF40B-203ENST00000508736 ZNF496Q96IT1 587 aaPredicted RBP14.23□□□□□ -0.13
PRPF40B-203ENST00000508736 LRRFIP2Q9Y608 721 aaKnown RBP14.23□□□□□ -0.13
PRPF40B-203ENST00000508736 ZNF772Q68DY9 489 aaPredicted RBP14.23□□□□□ -0.13
PRPF40B-203ENST00000508736 SSH3Q8TE77 659 aa14.23□□□□□ -0.13
PRPF40B-203ENST00000508736 CIZ1Q9ULV3 898 aaPredicted RBP14.23□□□□□ -0.13
PRPF40B-203ENST00000508736 NRAPQ86VF7 1730 aa14.22□□□□□ -0.13
PRPF40B-203ENST00000508736 SHANK3Q9BYB0 1731 aa14.22□□□□□ -0.13
PRPF40B-203ENST00000508736 PRAMEF22A3QJZ6 481 aa14.22□□□□□ -0.13
PRPF40B-203ENST00000508736 ANXA1P04083 346 aa14.22□□□□□ -0.13
PRPF40B-203ENST00000508736 GLI3P10071 1580 aa14.22□□□□□ -0.13
PRPF40B-203ENST00000508736 PROSER3Q2NL68 480 aa14.22□□□□□ -0.13
PRPF40B-203ENST00000508736 GJD4Q96KN9 370 aaPredicted RBP14.22□□□□□ -0.13
PRPF40B-203ENST00000508736 OSBPL3Q9H4L5 887 aa14.22□□□□□ -0.13
PRPF40B-203ENST00000508736 LAMB4A4D0S4 1761 aa14.21□□□□□ -0.13
PRPF40B-203ENST00000508736 PAPPAQ13219 1627 aa14.21□□□□□ -0.13
PRPF40B-203ENST00000508736 ERBB4Q15303 1308 aa14.21□□□□□ -0.13
PRPF40B-203ENST00000508736 MAP3K2Q9Y2U5 619 aa14.21□□□□□ -0.13
PRPF40B-203ENST00000508736 UBR2Q8IWV8 1755 aa14.21□□□□□ -0.13
PRPF40B-203ENST00000508736 PNMA6EA0A0J9YXQ4 647 aa14.21□□□□□ -0.14
PRPF40B-203ENST00000508736 MCM4P33991 863 aa14.21□□□□□ -0.14
PRPF40B-203ENST00000508736 MTX1Q13505 466 aa14.21□□□□□ -0.14
PRPF40B-203ENST00000508736 POLA2Q14181 598 aa14.21□□□□□ -0.14
PRPF40B-203ENST00000508736 FAM98CQ17RN3 349 aaKnown RBP14.21□□□□□ -0.14
PRPF40B-203ENST00000508736 LINS1Q8NG48 757 aa14.21□□□□□ -0.14
PRPF40B-203ENST00000508736 THRAP3Q9Y2W1 955 aaKnown RBP14.21□□□□□ -0.14
PRPF40B-203ENST00000508736 UTYO14607 1347 aa14.2□□□□□ -0.14
PRPF40B-203ENST00000508736 DDX11L8A8MPP1 907 aa14.2□□□□□ -0.14
PRPF40B-203ENST00000508736 HSP90AA1P07900 732 aaKnown RBP14.2□□□□□ -0.14
PRPF40B-203ENST00000508736 RGS17Q9UGC6 210 aaPredicted RBP14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms