RNA–Protein interactions for RNA: ENST00000508619.1

LINC02171-201, Transcript of long intergenic non-protein coding RNA 2171, humanhuman

TSL 1 (best) BASIC

Gene LINC02171, Length 1,033 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02171-201ENST00000508619 ZPR1O75312 459 aa17.98■□□□□ 0.47
LINC02171-201ENST00000508619 RTF1Q92541 710 aaKnown RBP17.98■□□□□ 0.47
LINC02171-201ENST00000508619 FMNL2Q96PY5 1086 aa17.98■□□□□ 0.47
LINC02171-201ENST00000508619 SRP68Q9UHB9 627 aaKnown RBP17.98■□□□□ 0.47
LINC02171-201ENST00000508619 TM4SF1P30408 202 aa17.97■□□□□ 0.47
LINC02171-201ENST00000508619 FKBP8Q14318 412 aa17.97■□□□□ 0.47
LINC02171-201ENST00000508619 A0A087WZG4 1122 aa17.96■□□□□ 0.47
LINC02171-201ENST00000508619 NEFMP07197 916 aa17.96■□□□□ 0.47
LINC02171-201ENST00000508619 EIF5P55010 431 aaKnown RBP17.96■□□□□ 0.47
LINC02171-201ENST00000508619 PNNQ9H307 717 aaKnown RBP17.96■□□□□ 0.47
LINC02171-201ENST00000508619 BTBD11A6QL63 1104 aa17.95■□□□□ 0.46
LINC02171-201ENST00000508619 DDR1Q08345 913 aa17.95■□□□□ 0.46
LINC02171-201ENST00000508619 USPL1Q5W0Q7 1092 aa17.95■□□□□ 0.46
LINC02171-201ENST00000508619 ADCY9O60503 1353 aa17.94■□□□□ 0.46
LINC02171-201ENST00000508619 POLRMTO00411 1230 aaKnown RBP17.94■□□□□ 0.46
LINC02171-201ENST00000508619 IL6STP40189 918 aaPredicted RBP17.94■□□□□ 0.46
LINC02171-201ENST00000508619 PLEKHF1Q96S99 279 aa17.94■□□□□ 0.46
LINC02171-201ENST00000508619 BRCA1P38398 1863 aaKnown RBP17.92■□□□□ 0.46
LINC02171-201ENST00000508619 NRXN2Q9P2S2 1712 aa17.92■□□□□ 0.46
LINC02171-201ENST00000508619 MCM10Q7L590 875 aa17.92■□□□□ 0.46
LINC02171-201ENST00000508619 CANXP27824 592 aaKnown RBP17.91■□□□□ 0.46
LINC02171-201ENST00000508619 NFIXQ14938 502 aa17.91■□□□□ 0.46
LINC02171-201ENST00000508619 TAF7Q15545 349 aaPredicted RBP17.91■□□□□ 0.46
LINC02171-201ENST00000508619 BCL2L12Q9HB09 334 aa17.91■□□□□ 0.46
LINC02171-201ENST00000508619 N4BP2Q86UW6 1770 aaPredicted RBP17.9■□□□□ 0.46
LINC02171-201ENST00000508619 A0A0G2JLW4 131 aa17.9■□□□□ 0.46
LINC02171-201ENST00000508619 RGL2O15211 777 aa17.9■□□□□ 0.46
LINC02171-201ENST00000508619 SNRPA1P09661 255 aaKnown RBP17.9■□□□□ 0.46
LINC02171-201ENST00000508619 DPEP1P16444 411 aa17.9■□□□□ 0.46
LINC02171-201ENST00000508619 KCNA3P22001 575 aa17.9■□□□□ 0.46
LINC02171-201ENST00000508619 PNISRQ8TF01 805 aaKnown RBP17.9■□□□□ 0.46
LINC02171-201ENST00000508619 SCN7AQ01118 1682 aa17.9■□□□□ 0.46
LINC02171-201ENST00000508619 KCNQ3O43525 872 aa17.89■□□□□ 0.45
LINC02171-201ENST00000508619 NFE2L2Q16236 605 aa17.89■□□□□ 0.45
LINC02171-201ENST00000508619 PIM2Q9P1W9 311 aa17.88■□□□□ 0.45
LINC02171-201ENST00000508619 MYBBP1AQ9BQG0 1328 aaKnown RBP17.88■□□□□ 0.45
LINC02171-201ENST00000508619 ARFGEF1Q9Y6D6 1849 aa17.88■□□□□ 0.45
LINC02171-201ENST00000508619 ATP10DQ9P241 1426 aa17.88■□□□□ 0.45
LINC02171-201ENST00000508619 DDX10Q13206 875 aaKnown RBP17.87■□□□□ 0.45
LINC02171-201ENST00000508619 DCTN1Q14203 1278 aa17.87■□□□□ 0.45
LINC02171-201ENST00000508619 NPM2Q86SE8 214 aaKnown RBP17.87■□□□□ 0.45
LINC02171-201ENST00000508619 BCS1LQ9Y276 419 aa17.87■□□□□ 0.45
LINC02171-201ENST00000508619 MAPK8IP3Q9UPT6 1336 aa17.87■□□□□ 0.45
LINC02171-201ENST00000508619 AFDNP55196 1824 aaKnown RBP17.86■□□□□ 0.45
LINC02171-201ENST00000508619 DLG5Q8TDM6 1919 aa17.86■□□□□ 0.45
LINC02171-201ENST00000508619 SERPINB2P05120 415 aa17.86■□□□□ 0.45
LINC02171-201ENST00000508619 PDZRN3Q9UPQ7 1066 aa17.86■□□□□ 0.45
LINC02171-201ENST00000508619 USP16Q9Y5T5 823 aa17.86■□□□□ 0.45
LINC02171-201ENST00000508619 CAMTA2O94983 1202 aa17.85■□□□□ 0.45
LINC02171-201ENST00000508619 A1BGP04217 495 aa17.85■□□□□ 0.45
LINC02171-201ENST00000508619 CLEC4GQ6UXB4 293 aa17.85■□□□□ 0.45
LINC02171-201ENST00000508619 CARMIL3Q8ND23 1372 aa17.85■□□□□ 0.45
LINC02171-201ENST00000508619 GIGYF1O75420 1035 aaPredicted RBP17.84■□□□□ 0.45
LINC02171-201ENST00000508619 DALRD3Q5D0E6 543 aaKnown RBP17.84■□□□□ 0.45
LINC02171-201ENST00000508619 KDM3BQ7LBC6 1761 aa17.84■□□□□ 0.45
LINC02171-201ENST00000508619 C1QTNF8P60827 252 aa17.83■□□□□ 0.44
LINC02171-201ENST00000508619 BABAM1Q9NWV8 329 aa17.83■□□□□ 0.44
LINC02171-201ENST00000508619 WWC3Q9ULE0 1092 aa17.83■□□□□ 0.44
LINC02171-201ENST00000508619 BCORQ6W2J9 1755 aa17.83■□□□□ 0.44
LINC02171-201ENST00000508619 LAMB4A4D0S4 1761 aa17.82■□□□□ 0.44
LINC02171-201ENST00000508619 DLEC1Q9Y238 1755 aa17.82■□□□□ 0.44
LINC02171-201ENST00000508619 TBC1D9BQ66K14 1250 aa17.82■□□□□ 0.44
LINC02171-201ENST00000508619 DZIP3Q86Y13 1208 aaKnown RBP17.82■□□□□ 0.44
LINC02171-201ENST00000508619 TBC1D2BQ9UPU7 963 aa17.82■□□□□ 0.44
LINC02171-201ENST00000508619 LMOD3Q0VAK6 560 aa17.81■□□□□ 0.44
LINC02171-201ENST00000508619 BRIP1Q9BX63 1249 aa17.81■□□□□ 0.44
LINC02171-201ENST00000508619 ZNF652Q9Y2D9 606 aa17.81■□□□□ 0.44
LINC02171-201ENST00000508619 PRAMEF22A3QJZ6 481 aa17.8■□□□□ 0.44
LINC02171-201ENST00000508619 CHRNA5P30532 468 aa17.8■□□□□ 0.44
LINC02171-201ENST00000508619 EIF4A1P60842 406 aaKnown RBP17.8■□□□□ 0.44
LINC02171-201ENST00000508619 SETDB2Q96T68 719 aa17.8■□□□□ 0.44
LINC02171-201ENST00000508619 GPBP1L1Q9HC44 474 aaPredicted RBP17.8■□□□□ 0.44
LINC02171-201ENST00000508619 ZNF330Q9Y3S2 320 aaPredicted RBP17.8■□□□□ 0.44
LINC02171-201ENST00000508619 NBPF26B4DH59 902 aa17.79■□□□□ 0.44
LINC02171-201ENST00000508619 ZEB1P37275 1124 aaPredicted RBP17.79■□□□□ 0.44
LINC02171-201ENST00000508619 NBPF10Q6P3W6 841 aaKnown RBP17.79■□□□□ 0.44
LINC02171-201ENST00000508619 ARHGAP27Q6ZUM4 889 aa17.79■□□□□ 0.44
LINC02171-201ENST00000508619 NBPF15Q8N660 670 aa17.79■□□□□ 0.44
LINC02171-201ENST00000508619 ERBB4Q15303 1308 aa17.78■□□□□ 0.44
LINC02171-201ENST00000508619 PDE6BP35913 854 aa17.78■□□□□ 0.44
LINC02171-201ENST00000508619 TMPOP42166 694 aaKnown RBP17.78■□□□□ 0.44
LINC02171-201ENST00000508619 PRR5LQ6MZQ0 368 aa17.78■□□□□ 0.44
LINC02171-201ENST00000508619 PRKRIP1Q9H875 184 aaPredicted RBP17.78■□□□□ 0.44
LINC02171-201ENST00000508619 H0YIN7 160 aa17.77■□□□□ 0.44
LINC02171-201ENST00000508619 RIPK4P57078 832 aa17.77■□□□□ 0.44
LINC02171-201ENST00000508619 BICDL1Q6ZP65 573 aa17.77■□□□□ 0.44
LINC02171-201ENST00000508619 TTLL6Q8N841 843 aa17.77■□□□□ 0.44
LINC02171-201ENST00000508619 CNBD1Q8NA66 436 aa17.77■□□□□ 0.44
LINC02171-201ENST00000508619 MIS18AQ9NYP9 233 aa17.77■□□□□ 0.44
LINC02171-201ENST00000508619 ZC3H4Q9UPT8 1303 aaKnown RBP17.76■□□□□ 0.43
LINC02171-201ENST00000508619 C2CD5Q86YS7 1000 aa17.76■□□□□ 0.43
LINC02171-201ENST00000508619 THUMPD2Q9BTF0 503 aaKnown RBP17.76■□□□□ 0.43
LINC02171-201ENST00000508619 ANKRD31Q8N7Z5 1873 aa17.75■□□□□ 0.43
LINC02171-201ENST00000508619 ERVV-1B6SEH8 477 aa17.75■□□□□ 0.43
LINC02171-201ENST00000508619 ST5P78524 1137 aa17.75■□□□□ 0.43
LINC02171-201ENST00000508619 WDR43Q15061 677 aaKnown RBP eCLIP17.75■□□□□ 0.43
LINC02171-201ENST00000508619 RUNDC1Q96C34 613 aa17.75■□□□□ 0.43
LINC02171-201ENST00000508619 C9orf131Q5VYM1 1079 aa17.74■□□□□ 0.43
LINC02171-201ENST00000508619 PIP4K2AP48426 406 aaPredicted RBP17.73■□□□□ 0.43
LINC02171-201ENST00000508619 TSPYL4Q9UJ04 414 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms