RNA–Protein interactions for RNA: ENST00000508597.1

HMGB1P44-201, Transcript of high mobility group box 1 pseudogene 44, humanhuman

BASIC

Gene HMGB1P44, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P44-201ENST00000508597 MAP4K5Q9Y4K4 846 aa8.08□□□□□ -1.12
HMGB1P44-201ENST00000508597 NUP155O75694 1391 aa8.08□□□□□ -1.12
HMGB1P44-201ENST00000508597 RAB3GAP2Q9H2M9 1393 aa8.08□□□□□ -1.12
HMGB1P44-201ENST00000508597 ARHGAP31Q2M1Z3 1444 aa8.07□□□□□ -1.12
HMGB1P44-201ENST00000508597 POM121CA8CG34 1229 aa8.07□□□□□ -1.12
HMGB1P44-201ENST00000508597 GIGYF1O75420 1035 aaPredicted RBP8.07□□□□□ -1.12
HMGB1P44-201ENST00000508597 RAB15P59190 212 aa8.07□□□□□ -1.12
HMGB1P44-201ENST00000508597 INTS6LQ5JSJ4 861 aaKnown RBP8.07□□□□□ -1.12
HMGB1P44-201ENST00000508597 DZIP3Q86Y13 1208 aaKnown RBP8.07□□□□□ -1.12
HMGB1P44-201ENST00000508597 ITPKCQ96DU7 683 aa8.07□□□□□ -1.12
HMGB1P44-201ENST00000508597 SLC10A4Q96EP9 437 aa8.07□□□□□ -1.12
HMGB1P44-201ENST00000508597 IQGAP3Q86VI3 1631 aa8.07□□□□□ -1.12
HMGB1P44-201ENST00000508597 TIMP2P16035 220 aa8.06□□□□□ -1.12
HMGB1P44-201ENST00000508597 NR5A1Q13285 461 aa8.06□□□□□ -1.12
HMGB1P44-201ENST00000508597 TSGA10IPQ3SY00 556 aa8.06□□□□□ -1.12
HMGB1P44-201ENST00000508597 TMPRSS4Q9NRS4 437 aa8.06□□□□□ -1.12
HMGB1P44-201ENST00000508597 ABCC3O15438 1527 aa8.06□□□□□ -1.12
HMGB1P44-201ENST00000508597 ZMYM3Q14202 1370 aa8.06□□□□□ -1.12
HMGB1P44-201ENST00000508597 MADDQ8WXG6 1647 aa8.06□□□□□ -1.12
HMGB1P44-201ENST00000508597 RPRD2Q5VT52 1461 aaKnown RBP8.06□□□□□ -1.12
HMGB1P44-201ENST00000508597 TET3O43151 1660 aa8.05□□□□□ -1.12
HMGB1P44-201ENST00000508597 ESPNB1AK53 854 aa8.05□□□□□ -1.12
HMGB1P44-201ENST00000508597 APBB1O00213 710 aa8.05□□□□□ -1.12
HMGB1P44-201ENST00000508597 WDR4P57081 412 aaKnown RBP8.05□□□□□ -1.12
HMGB1P44-201ENST00000508597 FNBP4Q8N3X1 1017 aaPredicted RBP8.05□□□□□ -1.12
HMGB1P44-201ENST00000508597 TRIM52Q96A61 297 aa8.05□□□□□ -1.12
HMGB1P44-201ENST00000508597 CLTCQ00610 1675 aaKnown RBP8.05□□□□□ -1.12
HMGB1P44-201ENST00000508597 CEP152O94986 1710 aa8.04□□□□□ -1.12
HMGB1P44-201ENST00000508597 SMCPP49901 116 aaPredicted RBP8.04□□□□□ -1.12
HMGB1P44-201ENST00000508597 PPP1R26Q5T8A7 1209 aaPredicted RBP8.04□□□□□ -1.12
HMGB1P44-201ENST00000508597 CRIPAKQ8N1N5 446 aa8.04□□□□□ -1.12
HMGB1P44-201ENST00000508597 ADAMTS19Q8TE59 1207 aa8.04□□□□□ -1.12
HMGB1P44-201ENST00000508597 PCGF6Q9BYE7 350 aa8.04□□□□□ -1.12
HMGB1P44-201ENST00000508597 PZPP20742 1482 aa8.04□□□□□ -1.12
HMGB1P44-201ENST00000508597 RIMS1Q86UR5 1692 aaKnown RBP8.04□□□□□ -1.12
HMGB1P44-201ENST00000508597 NPATQ14207 1427 aa8.03□□□□□ -1.12
HMGB1P44-201ENST00000508597 CAMSAP1Q5T5Y3 1602 aa8.03□□□□□ -1.12
HMGB1P44-201ENST00000508597 PTPRMP28827 1452 aa8.03□□□□□ -1.12
HMGB1P44-201ENST00000508597 ERVH48-1M5A8F1 160 aa8.03□□□□□ -1.12
HMGB1P44-201ENST00000508597 AXIN1O15169 862 aa8.03□□□□□ -1.12
HMGB1P44-201ENST00000508597 ZIC2O95409 532 aaPredicted RBP8.03□□□□□ -1.12
HMGB1P44-201ENST00000508597 BMP1P13497 986 aa8.03□□□□□ -1.12
HMGB1P44-201ENST00000508597 CBLBQ13191 982 aa8.03□□□□□ -1.12
HMGB1P44-201ENST00000508597 MPHOSPH9Q99550 1183 aa8.03□□□□□ -1.12
HMGB1P44-201ENST00000508597 CEP126Q9P2H0 1117 aa8.03□□□□□ -1.12
HMGB1P44-201ENST00000508597 EFCAB6Q5THR3 1501 aa8.03□□□□□ -1.12
HMGB1P44-201ENST00000508597 C3P01024 1663 aa8.02□□□□□ -1.13
HMGB1P44-201ENST00000508597 CAPN5O15484 640 aaPredicted RBP8.02□□□□□ -1.13
HMGB1P44-201ENST00000508597 TRIM46Q7Z4K8 759 aa8.02□□□□□ -1.13
HMGB1P44-201ENST00000508597 CCDC116Q8IYX3 515 aa8.02□□□□□ -1.13
HMGB1P44-201ENST00000508597 PRM3Q9NNZ6 103 aa8.02□□□□□ -1.13
HMGB1P44-201ENST00000508597 ADD1P35611 737 aaKnown RBP8.01□□□□□ -1.13
HMGB1P44-201ENST00000508597 CFAP65Q6ZU64 1925 aaKnown RBP8.01□□□□□ -1.13
HMGB1P44-201ENST00000508597 SPATA31D1Q6ZQQ2 1576 aa8.01□□□□□ -1.13
HMGB1P44-201ENST00000508597 E9PCH4 1651 aa8□□□□□ -1.13
HMGB1P44-201ENST00000508597 RAD21O60216 631 aa8□□□□□ -1.13
HMGB1P44-201ENST00000508597 LILRA1O75019 489 aa8□□□□□ -1.13
HMGB1P44-201ENST00000508597 CTC1Q2NKJ3 1217 aa8□□□□□ -1.13
HMGB1P44-201ENST00000508597 PROSER2Q86WR7 435 aaPredicted RBP8□□□□□ -1.13
HMGB1P44-201ENST00000508597 PHTF2Q8N3S3 785 aa8□□□□□ -1.13
HMGB1P44-201ENST00000508597 CCDC85AQ96PX6 553 aaPredicted RBP8□□□□□ -1.13
HMGB1P44-201ENST00000508597 CDCA7Q9BWT1 371 aaPredicted RBP8□□□□□ -1.13
HMGB1P44-201ENST00000508597 ALG2Q9H553 416 aa8□□□□□ -1.13
HMGB1P44-201ENST00000508597 SLC52A1Q9NWF4 448 aa8□□□□□ -1.13
HMGB1P44-201ENST00000508597 GMPR2Q9P2T1 348 aaKnown RBP8□□□□□ -1.13
HMGB1P44-201ENST00000508597 NOS1P29475 1434 aa8□□□□□ -1.13
HMGB1P44-201ENST00000508597 ERVK-7P63135 1459 aa8□□□□□ -1.13
HMGB1P44-201ENST00000508597 PREX1Q8TCU6 1659 aa7.99□□□□□ -1.13
HMGB1P44-201ENST00000508597 PIK3CDO00329 1044 aa7.99□□□□□ -1.13
HMGB1P44-201ENST00000508597 PTPRTO14522 1441 aa7.99□□□□□ -1.13
HMGB1P44-201ENST00000508597 TRAK2O60296 914 aa7.99□□□□□ -1.13
HMGB1P44-201ENST00000508597 WASHC4Q2M389 1173 aa7.99□□□□□ -1.13
HMGB1P44-201ENST00000508597 ZNF784Q8NCA9 323 aaPredicted RBP7.99□□□□□ -1.13
HMGB1P44-201ENST00000508597 ATP13A2Q9NQ11 1180 aa7.99□□□□□ -1.13
HMGB1P44-201ENST00000508597 CDV3Q9UKY7 258 aaKnown RBP7.99□□□□□ -1.13
HMGB1P44-201ENST00000508597 TNRQ92752 1358 aa7.98□□□□□ -1.13
HMGB1P44-201ENST00000508597 SCTRP47872 440 aa7.98□□□□□ -1.13
HMGB1P44-201ENST00000508597 NBPF20Q3BBV1 942 aa7.98□□□□□ -1.13
HMGB1P44-201ENST00000508597 KDF1Q8NAX2 398 aaPredicted RBP7.98□□□□□ -1.13
HMGB1P44-201ENST00000508597 AGBL1Q96MI9 1066 aa7.98□□□□□ -1.13
HMGB1P44-201ENST00000508597 NLRP1Q9C000 1473 aa7.98□□□□□ -1.13
HMGB1P44-201ENST00000508597 SPHKAPQ2M3C7 1700 aa7.98□□□□□ -1.13
HMGB1P44-201ENST00000508597 CEBPAP49715 358 aaPredicted RBP7.97□□□□□ -1.13
HMGB1P44-201ENST00000508597 EIF4G2P78344 907 aaKnown RBP eCLIP7.97□□□□□ -1.13
HMGB1P44-201ENST00000508597 CYLDQ9NQC7 956 aa7.97□□□□□ -1.13
HMGB1P44-201ENST00000508597 ZNF330Q9Y3S2 320 aaPredicted RBP7.97□□□□□ -1.13
HMGB1P44-201ENST00000508597 EMILIN1Q9Y6C2 1016 aa7.97□□□□□ -1.13
HMGB1P44-201ENST00000508597 TRPM2O94759 1503 aa7.97□□□□□ -1.13
HMGB1P44-201ENST00000508597 CLSPNQ9HAW4 1339 aa7.97□□□□□ -1.13
HMGB1P44-201ENST00000508597 UHRF1BP1Q6BDS2 1440 aa7.96□□□□□ -1.13
HMGB1P44-201ENST00000508597 KDM5AP29375 1690 aaKnown RBP7.96□□□□□ -1.13
HMGB1P44-201ENST00000508597 HDGFL1Q5TGJ6 251 aa7.96□□□□□ -1.14
HMGB1P44-201ENST00000508597 ARXQ96QS3 562 aa7.96□□□□□ -1.14
HMGB1P44-201ENST00000508597 C1orf115Q9H7X2 142 aa7.96□□□□□ -1.14
HMGB1P44-201ENST00000508597 DHX57Q6P158 1386 aaKnown RBP7.96□□□□□ -1.14
HMGB1P44-201ENST00000508597 ANKRD30BQ9BXX2 1392 aa7.96□□□□□ -1.14
HMGB1P44-201ENST00000508597 SNRPBP14678 240 aaKnown RBP7.95□□□□□ -1.14
HMGB1P44-201ENST00000508597 Q6ZVU0 165 aa7.95□□□□□ -1.14
HMGB1P44-201ENST00000508597 ZFP42Q96MM3 310 aa7.95□□□□□ -1.14
HMGB1P44-201ENST00000508597 PIK3C2BO00750 1634 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms