RNA–Protein interactions for RNA: ENST00000508559.1

BRCC3P1-201, Transcript of BRCA1/BRCA2-containing complex subunit 3 pseudogene 1, humanhuman

BASIC

Gene BRCC3P1, Length 951 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P1-201ENST00000508559 BCAR3O75815 825 aa14.09□□□□□ -0.15
BRCC3P1-201ENST00000508559 MYL6BP14649 208 aa14.09□□□□□ -0.15
BRCC3P1-201ENST00000508559 SLC27A3Q5K4L6 730 aa14.09□□□□□ -0.15
BRCC3P1-201ENST00000508559 CHPF2Q9P2E5 772 aa14.09□□□□□ -0.15
BRCC3P1-201ENST00000508559 PLSCR1O15162 318 aa14.08□□□□□ -0.16
BRCC3P1-201ENST00000508559 A1BGP04217 495 aa14.08□□□□□ -0.16
BRCC3P1-201ENST00000508559 KCNQ4P56696 695 aa14.08□□□□□ -0.16
BRCC3P1-201ENST00000508559 CCDC125Q86Z20 511 aa14.08□□□□□ -0.16
BRCC3P1-201ENST00000508559 SLC4A9Q96Q91 983 aa14.08□□□□□ -0.16
BRCC3P1-201ENST00000508559 ARXQ96QS3 562 aa14.08□□□□□ -0.16
BRCC3P1-201ENST00000508559 HYPKQ9NX55 129 aa14.08□□□□□ -0.16
BRCC3P1-201ENST00000508559 SUPT16HQ9Y5B9 1047 aaKnown RBP14.08□□□□□ -0.16
BRCC3P1-201ENST00000508559 KIF16BQ96L93 1317 aa14.08□□□□□ -0.16
BRCC3P1-201ENST00000508559 UBR2Q8IWV8 1755 aa14.07□□□□□ -0.16
BRCC3P1-201ENST00000508559 CYP19A1P11511 503 aaPredicted RBP14.07□□□□□ -0.16
BRCC3P1-201ENST00000508559 ITPK1Q13572 414 aa14.07□□□□□ -0.16
BRCC3P1-201ENST00000508559 TXNRD1Q16881 649 aa14.07□□□□□ -0.16
BRCC3P1-201ENST00000508559 MRPL50Q8N5N7 158 aaKnown RBP14.07□□□□□ -0.16
BRCC3P1-201ENST00000508559 DDX21Q9NR30 783 aaKnown RBP eCLIP14.07□□□□□ -0.16
BRCC3P1-201ENST00000508559 CCDC87Q9NVE4 849 aa14.07□□□□□ -0.16
BRCC3P1-201ENST00000508559 ERBB4Q15303 1308 aa14.07□□□□□ -0.16
BRCC3P1-201ENST00000508559 ANXA1P04083 346 aa14.06□□□□□ -0.16
BRCC3P1-201ENST00000508559 NEFLP07196 543 aa14.06□□□□□ -0.16
BRCC3P1-201ENST00000508559 CRKLP46109 303 aaKnown RBP14.06□□□□□ -0.16
BRCC3P1-201ENST00000508559 PIP4K2AP48426 406 aaPredicted RBP14.06□□□□□ -0.16
BRCC3P1-201ENST00000508559 AK7Q96M32 723 aa14.06□□□□□ -0.16
BRCC3P1-201ENST00000508559 DDX58O95786 925 aaKnown RBP14.05□□□□□ -0.16
BRCC3P1-201ENST00000508559 MS4A1P11836 297 aa14.05□□□□□ -0.16
BRCC3P1-201ENST00000508559 EN1Q05925 392 aaPredicted RBP14.05□□□□□ -0.16
BRCC3P1-201ENST00000508559 AIMP1Q12904 312 aaKnown RBP14.05□□□□□ -0.16
BRCC3P1-201ENST00000508559 FKBP5Q13451 457 aaPredicted RBP14.05□□□□□ -0.16
BRCC3P1-201ENST00000508559 LINC00116Q8NCU8 138 aa14.05□□□□□ -0.16
BRCC3P1-201ENST00000508559 NOB1Q9ULX3 412 aaKnown RBP14.05□□□□□ -0.16
BRCC3P1-201ENST00000508559 RRP1P56182 461 aaKnown RBP14.04□□□□□ -0.16
BRCC3P1-201ENST00000508559 FLIIQ13045 1269 aa14.04□□□□□ -0.16
BRCC3P1-201ENST00000508559 ZKSCAN2Q63HK3 967 aa14.04□□□□□ -0.16
BRCC3P1-201ENST00000508559 FTSJ3Q8IY81 847 aaKnown RBP14.04□□□□□ -0.16
BRCC3P1-201ENST00000508559 C5P01031 1676 aa14.04□□□□□ -0.16
BRCC3P1-201ENST00000508559 GNPATO15228 680 aa14.03□□□□□ -0.16
BRCC3P1-201ENST00000508559 PLIN1O60240 522 aa14.03□□□□□ -0.16
BRCC3P1-201ENST00000508559 PROSER3Q2NL68 480 aa14.03□□□□□ -0.16
BRCC3P1-201ENST00000508559 RC3H1Q5TC82 1133 aaKnown RBP14.03□□□□□ -0.16
BRCC3P1-201ENST00000508559 KIF6Q6ZMV9 814 aa14.03□□□□□ -0.16
BRCC3P1-201ENST00000508559 XAGE3Q8WTP9 111 aa14.03□□□□□ -0.16
BRCC3P1-201ENST00000508559 API5Q9BZZ5 524 aaKnown RBP14.03□□□□□ -0.16
BRCC3P1-201ENST00000508559 ZBTB1Q9Y2K1 713 aa14.03□□□□□ -0.16
BRCC3P1-201ENST00000508559 LAMB4A4D0S4 1761 aa14.02□□□□□ -0.16
BRCC3P1-201ENST00000508559 PTPRCP08575 1304 aa14.02□□□□□ -0.17
BRCC3P1-201ENST00000508559 CNTNAP4Q9C0A0 1308 aa14.02□□□□□ -0.17
BRCC3P1-201ENST00000508559 BRPF1P55201 1214 aaPredicted RBP14.02□□□□□ -0.17
BRCC3P1-201ENST00000508559 EZH2Q15910 746 aaKnown RBP14.02□□□□□ -0.17
BRCC3P1-201ENST00000508559 COPS6Q7L5N1 327 aa14.02□□□□□ -0.17
BRCC3P1-201ENST00000508559 G2E3Q7L622 706 aa14.02□□□□□ -0.17
BRCC3P1-201ENST00000508559 PHAXQ9H814 394 aaKnown RBP14.02□□□□□ -0.17
BRCC3P1-201ENST00000508559 LRRC4BQ9NT99 713 aa14.02□□□□□ -0.17
BRCC3P1-201ENST00000508559 RTCBQ9Y3I0 505 aaKnown RBP14.02□□□□□ -0.17
BRCC3P1-201ENST00000508559 A0A087WZG4 1122 aa14.01□□□□□ -0.17
BRCC3P1-201ENST00000508559 NBPF26B4DH59 902 aa14.01□□□□□ -0.17
BRCC3P1-201ENST00000508559 IL6STP40189 918 aaPredicted RBP14.01□□□□□ -0.17
BRCC3P1-201ENST00000508559 PDIA6Q15084 440 aa14.01□□□□□ -0.17
BRCC3P1-201ENST00000508559 NBPF14Q5TI25 921 aa14.01□□□□□ -0.17
BRCC3P1-201ENST00000508559 NBPF10Q6P3W6 841 aaKnown RBP14.01□□□□□ -0.17
BRCC3P1-201ENST00000508559 INTS5Q6P9B9 1019 aaKnown RBP14.01□□□□□ -0.17
BRCC3P1-201ENST00000508559 ATF7IPQ6VMQ6 1270 aa14.01□□□□□ -0.17
BRCC3P1-201ENST00000508559 RIC3Q7Z5B4 369 aa14.01□□□□□ -0.17
BRCC3P1-201ENST00000508559 DEFB132Q7Z7B7 95 aa14.01□□□□□ -0.17
BRCC3P1-201ENST00000508559 NBPF15Q8N660 670 aa14.01□□□□□ -0.17
BRCC3P1-201ENST00000508559 CAMKK2Q96RR4 588 aa14.01□□□□□ -0.17
BRCC3P1-201ENST00000508559 TJP1Q07157 1748 aa14.01□□□□□ -0.17
BRCC3P1-201ENST00000508559 TNS1Q9HBL0 1735 aaKnown RBP14.01□□□□□ -0.17
BRCC3P1-201ENST00000508559 MAPK8IP2Q13387 824 aaPredicted RBP14□□□□□ -0.17
BRCC3P1-201ENST00000508559 SLC4A10Q6U841 1118 aa14□□□□□ -0.17
BRCC3P1-201ENST00000508559 PROM2Q8N271 834 aa14□□□□□ -0.17
BRCC3P1-201ENST00000508559 ARHGAP45Q92619 1136 aa14□□□□□ -0.17
BRCC3P1-201ENST00000508559 CLUAP1Q96AJ1 413 aa14□□□□□ -0.17
BRCC3P1-201ENST00000508559 TFCP2L1Q9NZI6 479 aa14□□□□□ -0.17
BRCC3P1-201ENST00000508559 LY75O60449 1722 aa14□□□□□ -0.17
BRCC3P1-201ENST00000508559 RPS6KA4O75676 772 aa13.99□□□□□ -0.17
BRCC3P1-201ENST00000508559 PHF14O94880 888 aa13.99□□□□□ -0.17
BRCC3P1-201ENST00000508559 ANKRD13DQ6ZTN6 518 aa13.99□□□□□ -0.17
BRCC3P1-201ENST00000508559 DZIP3Q86Y13 1208 aaKnown RBP13.99□□□□□ -0.17
BRCC3P1-201ENST00000508559 DZIP1LQ8IYY4 767 aaKnown RBP13.99□□□□□ -0.17
BRCC3P1-201ENST00000508559 UPF1Q92900 1129 aaKnown RBP eCLIP13.99□□□□□ -0.17
BRCC3P1-201ENST00000508559 STK32BQ9NY57 414 aa13.99□□□□□ -0.17
BRCC3P1-201ENST00000508559 ZNF831Q5JPB2 1677 aa13.98□□□□□ -0.17
BRCC3P1-201ENST00000508559 PI4KAP2A4QPH2 592 aa13.98□□□□□ -0.17
BRCC3P1-201ENST00000508559 ZPR1O75312 459 aa13.98□□□□□ -0.17
BRCC3P1-201ENST00000508559 TRIM27P14373 513 aa13.98□□□□□ -0.17
BRCC3P1-201ENST00000508559 NEXNQ0ZGT2 675 aa13.98□□□□□ -0.17
BRCC3P1-201ENST00000508559 TRAPPC3LQ5T215 181 aa13.98□□□□□ -0.17
BRCC3P1-201ENST00000508559 KSR2Q6VAB6 950 aa13.98□□□□□ -0.17
BRCC3P1-201ENST00000508559 PI4KAP1Q8N8J0 262 aa13.98□□□□□ -0.17
BRCC3P1-201ENST00000508559 ZBTB3Q9H5J0 574 aa13.98□□□□□ -0.17
BRCC3P1-201ENST00000508559 EP400Q96L91 3159 aa13.98□□□□□ -0.17
BRCC3P1-201ENST00000508559 COL15A1P39059 1388 aa13.97□□□□□ -0.17
BRCC3P1-201ENST00000508559 F6X3S4 739 aa13.97□□□□□ -0.17
BRCC3P1-201ENST00000508559 RFC4P35249 363 aa13.97□□□□□ -0.17
BRCC3P1-201ENST00000508559 EIF5P55010 431 aaKnown RBP13.97□□□□□ -0.17
BRCC3P1-201ENST00000508559 IRX6P78412 446 aaPredicted RBP13.97□□□□□ -0.17
BRCC3P1-201ENST00000508559 TTLL7Q6ZT98 887 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms