RNA–Protein interactions for RNA: ENST00000508167.5

PROM1-207, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PROM1, Length 4,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-207ENST00000508167 VAMP4O75379 141 aa13.96□□□□□ -0.17
PROM1-207ENST00000508167 MS4A1P11836 297 aa13.96□□□□□ -0.17
PROM1-207ENST00000508167 BAG6P46379 1132 aa13.96□□□□□ -0.17
PROM1-207ENST00000508167 CLUAP1Q96AJ1 413 aa13.96□□□□□ -0.18
PROM1-207ENST00000508167 CT47B1P0C2W7 299 aaPredicted RBP13.95□□□□□ -0.18
PROM1-207ENST00000508167 IPO8O15397 1037 aaKnown RBP13.95□□□□□ -0.18
PROM1-207ENST00000508167 FKBP5Q13451 457 aaPredicted RBP13.95□□□□□ -0.18
PROM1-207ENST00000508167 SSH1Q8WYL5 1049 aa13.95□□□□□ -0.18
PROM1-207ENST00000508167 CENPQQ7L2Z9 268 aaPredicted RBP13.95□□□□□ -0.18
PROM1-207ENST00000508167 BCL9O00512 1426 aa13.94□□□□□ -0.18
PROM1-207ENST00000508167 SLC4A10Q6U841 1118 aa13.94□□□□□ -0.18
PROM1-207ENST00000508167 C8orf34Q49A92 452 aa13.94□□□□□ -0.18
PROM1-207ENST00000508167 CHPF2Q9P2E5 772 aa13.94□□□□□ -0.18
PROM1-207ENST00000508167 A1BGP04217 495 aa13.94□□□□□ -0.18
PROM1-207ENST00000508167 DBF4Q9UBU7 674 aaPredicted RBP13.94□□□□□ -0.18
PROM1-207ENST00000508167 BRPF1P55201 1214 aaPredicted RBP13.93□□□□□ -0.18
PROM1-207ENST00000508167 AK7Q96M32 723 aa13.93□□□□□ -0.18
PROM1-207ENST00000508167 PCDHB15Q9Y5E8 787 aa13.93□□□□□ -0.18
PROM1-207ENST00000508167 HEG1Q9ULI3 1381 aa13.93□□□□□ -0.18
PROM1-207ENST00000508167 ZNF428Q96B54 188 aa13.93□□□□□ -0.18
PROM1-207ENST00000508167 ADAMTS7Q9UKP4 1686 aa13.93□□□□□ -0.18
PROM1-207ENST00000508167 SIPA1L3O60292 1781 aaPredicted RBP13.93□□□□□ -0.18
PROM1-207ENST00000508167 EN1Q05925 392 aaPredicted RBP13.93□□□□□ -0.18
PROM1-207ENST00000508167 PHF14O94880 888 aa13.92□□□□□ -0.18
PROM1-207ENST00000508167 PDE4AP27815 886 aa13.92□□□□□ -0.18
PROM1-207ENST00000508167 KDM3BQ7LBC6 1761 aa13.92□□□□□ -0.18
PROM1-207ENST00000508167 DDX58O95786 925 aaKnown RBP13.92□□□□□ -0.18
PROM1-207ENST00000508167 HOXB7P09629 217 aa13.92□□□□□ -0.18
PROM1-207ENST00000508167 PKD1L3Q7Z443 1732 aa13.91□□□□□ -0.18
PROM1-207ENST00000508167 RIC3Q7Z5B4 369 aa13.91□□□□□ -0.18
PROM1-207ENST00000508167 TUBGCP6Q96RT7 1819 aa13.91□□□□□ -0.18
PROM1-207ENST00000508167 ZKSCAN2Q63HK3 967 aa13.91□□□□□ -0.18
PROM1-207ENST00000508167 NOB1Q9ULX3 412 aaKnown RBP13.91□□□□□ -0.18
PROM1-207ENST00000508167 KIF16BQ96L93 1317 aa13.91□□□□□ -0.18
PROM1-207ENST00000508167 GNPATO15228 680 aa13.91□□□□□ -0.18
PROM1-207ENST00000508167 TXNRD1Q16881 649 aa13.91□□□□□ -0.18
PROM1-207ENST00000508167 DEFB132Q7Z7B7 95 aa13.91□□□□□ -0.18
PROM1-207ENST00000508167 NPHP1O15259 732 aa13.9□□□□□ -0.18
PROM1-207ENST00000508167 ANP32EQ9BTT0 268 aa13.9□□□□□ -0.18
PROM1-207ENST00000508167 COG6Q9Y2V7 657 aa13.9□□□□□ -0.18
PROM1-207ENST00000508167 ALDH1L2Q3SY69 923 aa13.9□□□□□ -0.18
PROM1-207ENST00000508167 VSIG10Q8N0Z9 540 aa13.9□□□□□ -0.18
PROM1-207ENST00000508167 HMGB2P26583 209 aaKnown RBP13.9□□□□□ -0.18
PROM1-207ENST00000508167 KIF6Q6ZMV9 814 aa13.9□□□□□ -0.18
PROM1-207ENST00000508167 HYPKQ9NX55 129 aa13.9□□□□□ -0.18
PROM1-207ENST00000508167 TRIM27P14373 513 aa13.89□□□□□ -0.19
PROM1-207ENST00000508167 CCDC87Q9NVE4 849 aa13.89□□□□□ -0.19
PROM1-207ENST00000508167 TFCP2L1Q9NZI6 479 aa13.89□□□□□ -0.19
PROM1-207ENST00000508167 CRKLP46109 303 aaKnown RBP13.89□□□□□ -0.19
PROM1-207ENST00000508167 SOS1Q07889 1333 aaPredicted RBP13.89□□□□□ -0.19
PROM1-207ENST00000508167 COPS6Q7L5N1 327 aa13.89□□□□□ -0.19
PROM1-207ENST00000508167 DDX21Q9NR30 783 aaKnown RBP eCLIP13.89□□□□□ -0.19
PROM1-207ENST00000508167 RTCBQ9Y3I0 505 aaKnown RBP13.88□□□□□ -0.19
PROM1-207ENST00000508167 FLIIQ13045 1269 aa13.88□□□□□ -0.19
PROM1-207ENST00000508167 ITPK1Q13572 414 aa13.88□□□□□ -0.19
PROM1-207ENST00000508167 XAGE3Q8WTP9 111 aa13.88□□□□□ -0.19
PROM1-207ENST00000508167 API5Q9BZZ5 524 aaKnown RBP13.88□□□□□ -0.19
PROM1-207ENST00000508167 PHAXQ9H814 394 aaKnown RBP13.88□□□□□ -0.19
PROM1-207ENST00000508167 ZBTB1Q9Y2K1 713 aa13.88□□□□□ -0.19
PROM1-207ENST00000508167 ZBTB3Q9H5J0 574 aa13.88□□□□□ -0.19
PROM1-207ENST00000508167 TBC1D2BQ9UPU7 963 aa13.88□□□□□ -0.19
PROM1-207ENST00000508167 THSD7AQ9UPZ6 1657 aa13.88□□□□□ -0.19
PROM1-207ENST00000508167 ITPRIPQ8IWB1 547 aa13.87□□□□□ -0.19
PROM1-207ENST00000508167 NEXNQ0ZGT2 675 aa13.87□□□□□ -0.19
PROM1-207ENST00000508167 EZH2Q15910 746 aaKnown RBP13.87□□□□□ -0.19
PROM1-207ENST00000508167 PROSER3Q2NL68 480 aa13.87□□□□□ -0.19
PROM1-207ENST00000508167 G2E3Q7L622 706 aa13.87□□□□□ -0.19
PROM1-207ENST00000508167 MVPQ14764 893 aaKnown RBP13.87□□□□□ -0.19
PROM1-207ENST00000508167 F6X3S4 739 aa13.86□□□□□ -0.19
PROM1-207ENST00000508167 CYP19A1P11511 503 aaPredicted RBP13.86□□□□□ -0.19
PROM1-207ENST00000508167 SLC27A3Q5K4L6 730 aa13.86□□□□□ -0.19
PROM1-207ENST00000508167 MRPL50Q8N5N7 158 aaKnown RBP13.86□□□□□ -0.19
PROM1-207ENST00000508167 SLC4A9Q96Q91 983 aa13.86□□□□□ -0.19
PROM1-207ENST00000508167 ZPR1O75312 459 aa13.86□□□□□ -0.19
PROM1-207ENST00000508167 RFC4P35249 363 aa13.86□□□□□ -0.19
PROM1-207ENST00000508167 SCN11AQ9UI33 1791 aa13.85□□□□□ -0.19
PROM1-207ENST00000508167 NBPF14Q5TI25 921 aa13.85□□□□□ -0.19
PROM1-207ENST00000508167 DZIP1LQ8IYY4 767 aaKnown RBP13.85□□□□□ -0.19
PROM1-207ENST00000508167 STK32BQ9NY57 414 aa13.85□□□□□ -0.19
PROM1-207ENST00000508167 DOT1LQ8TEK3 1739 aa13.85□□□□□ -0.19
PROM1-207ENST00000508167 PI4KAP2A4QPH2 592 aa13.85□□□□□ -0.19
PROM1-207ENST00000508167 ATF7IPQ6VMQ6 1270 aa13.85□□□□□ -0.19
PROM1-207ENST00000508167 DZIP3Q86Y13 1208 aaKnown RBP13.85□□□□□ -0.19
PROM1-207ENST00000508167 PI4KAP1Q8N8J0 262 aa13.85□□□□□ -0.19
PROM1-207ENST00000508167 LINC00116Q8NCU8 138 aa13.85□□□□□ -0.19
PROM1-207ENST00000508167 FAM177BA6PVY3 158 aa13.85□□□□□ -0.19
PROM1-207ENST00000508167 ANKRD13DQ6ZTN6 518 aa13.85□□□□□ -0.19
PROM1-207ENST00000508167 PLSCR1O15162 318 aa13.84□□□□□ -0.19
PROM1-207ENST00000508167 BICDL1Q6ZP65 573 aa13.84□□□□□ -0.19
PROM1-207ENST00000508167 TRAPPC3LQ5T215 181 aa13.84□□□□□ -0.19
PROM1-207ENST00000508167 SMIM5Q71RC9 77 aa13.84□□□□□ -0.19
PROM1-207ENST00000508167 CCDC125Q86Z20 511 aa13.84□□□□□ -0.19
PROM1-207ENST00000508167 GTF2E1P29083 439 aaPredicted RBP13.84□□□□□ -0.19
PROM1-207ENST00000508167 MAP3K2Q9Y2U5 619 aa13.83□□□□□ -0.19
PROM1-207ENST00000508167 WNK3Q9BYP7 1800 aa13.83□□□□□ -0.2
PROM1-207ENST00000508167 MRC1P22897 1456 aa13.83□□□□□ -0.2
PROM1-207ENST00000508167 A0A087WZG4 1122 aa13.83□□□□□ -0.2
PROM1-207ENST00000508167 NBPF26B4DH59 902 aa13.82□□□□□ -0.2
PROM1-207ENST00000508167 NBPF10Q6P3W6 841 aaKnown RBP13.82□□□□□ -0.2
PROM1-207ENST00000508167 TTLL7Q6ZT98 887 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms