RNA–Protein interactions for RNA: ENST00000506885.5

CLDND1-212, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 750 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-212ENST00000506885 CNTNAP3Q9BZ76 1288 aa7.48□□□□□ -1.21
CLDND1-212ENST00000506885 FHDC1Q9C0D6 1143 aaPredicted RBP7.48□□□□□ -1.21
CLDND1-212ENST00000506885 PCDHGA11Q9Y5H2 935 aa7.48□□□□□ -1.21
CLDND1-212ENST00000506885 A0A1B0GTH6 734 aa7.47□□□□□ -1.21
CLDND1-212ENST00000506885 USP17L3A6NCW0 530 aa7.47□□□□□ -1.21
CLDND1-212ENST00000506885 USP17L4A6NCW7 530 aa7.47□□□□□ -1.21
CLDND1-212ENST00000506885 SCNN1DP51172 638 aa7.47□□□□□ -1.21
CLDND1-212ENST00000506885 SMTNP53814 917 aa7.47□□□□□ -1.21
CLDND1-212ENST00000506885 KRT76Q01546 638 aa7.47□□□□□ -1.21
CLDND1-212ENST00000506885 USP17L2Q6R6M4 530 aa7.47□□□□□ -1.21
CLDND1-212ENST00000506885 TBC1D9Q6ZT07 1266 aa7.47□□□□□ -1.21
CLDND1-212ENST00000506885 USP17L1Q7RTZ2 530 aa7.47□□□□□ -1.21
CLDND1-212ENST00000506885 TRIM22Q8IYM9 498 aa7.47□□□□□ -1.21
CLDND1-212ENST00000506885 SLC4A9Q96Q91 983 aa7.47□□□□□ -1.21
CLDND1-212ENST00000506885 CDC14CA4D256 554 aa7.46□□□□□ -1.22
CLDND1-212ENST00000506885 F11P03951 625 aa7.46□□□□□ -1.22
CLDND1-212ENST00000506885 VWA5B2Q8N398 1253 aa7.46□□□□□ -1.22
CLDND1-212ENST00000506885 GPR161Q8N6U8 529 aaKnown RBP7.46□□□□□ -1.22
CLDND1-212ENST00000506885 UCN2Q96RP3 112 aa7.46□□□□□ -1.22
CLDND1-212ENST00000506885 ADAMTS8Q9UP79 889 aa7.46□□□□□ -1.22
CLDND1-212ENST00000506885 GNEQ9Y223 722 aaKnown RBP7.46□□□□□ -1.22
CLDND1-212ENST00000506885 RBM19Q9Y4C8 960 aaKnown RBP7.46□□□□□ -1.22
CLDND1-212ENST00000506885 CDK2AP1O14519 115 aa7.45□□□□□ -1.22
CLDND1-212ENST00000506885 LBRQ14739 615 aaKnown RBP7.45□□□□□ -1.22
CLDND1-212ENST00000506885 RIPOR1Q6ZS17 1223 aa7.45□□□□□ -1.22
CLDND1-212ENST00000506885 DEPDC4Q8N2C3 294 aa7.45□□□□□ -1.22
CLDND1-212ENST00000506885 LARGE2Q8N3Y3 721 aa7.45□□□□□ -1.22
CLDND1-212ENST00000506885 GAS2L1Q99501 681 aaPredicted RBP7.45□□□□□ -1.22
CLDND1-212ENST00000506885 NIFKQ9BYG3 293 aaKnown RBP7.45□□□□□ -1.22
CLDND1-212ENST00000506885 PPP1R12CQ9BZL4 782 aa7.45□□□□□ -1.22
CLDND1-212ENST00000506885 TFIP11Q9UBB9 837 aaKnown RBP7.45□□□□□ -1.22
CLDND1-212ENST00000506885 PALM3A6NDB9 673 aaPredicted RBP7.44□□□□□ -1.22
CLDND1-212ENST00000506885 A6NJY4 79 aa7.44□□□□□ -1.22
CLDND1-212ENST00000506885 TMEM229AB2RXF0 380 aa7.44□□□□□ -1.22
CLDND1-212ENST00000506885 PGBD3Q8N328 593 aa7.44□□□□□ -1.22
CLDND1-212ENST00000506885 C1orf216Q8TAB5 229 aa7.44□□□□□ -1.22
CLDND1-212ENST00000506885 COL25A1Q9BXS0 654 aaPredicted RBP7.44□□□□□ -1.22
CLDND1-212ENST00000506885 DNAAF2Q9NVR5 837 aaKnown RBP7.44□□□□□ -1.22
CLDND1-212ENST00000506885 KIAA1522Q9P206 1035 aaPredicted RBP7.44□□□□□ -1.22
CLDND1-212ENST00000506885 MKRN1Q9UHC7 482 aaKnown RBP7.44□□□□□ -1.22
CLDND1-212ENST00000506885 TMEM88BA6NKF7 163 aa7.43□□□□□ -1.22
CLDND1-212ENST00000506885 MTFR1Q15390 333 aa7.43□□□□□ -1.22
CLDND1-212ENST00000506885 C4orf17Q53FE4 359 aa7.43□□□□□ -1.22
CLDND1-212ENST00000506885 SVOPQ8N4V2 548 aa7.43□□□□□ -1.22
CLDND1-212ENST00000506885 MRRFQ96E11 262 aaKnown RBP7.43□□□□□ -1.22
CLDND1-212ENST00000506885 TRERF1Q96PN7 1200 aa7.43□□□□□ -1.22
CLDND1-212ENST00000506885 SERTAD1Q9UHV2 236 aa7.43□□□□□ -1.22
CLDND1-212ENST00000506885 MAFBQ9Y5Q3 323 aaPredicted RBP7.43□□□□□ -1.22
CLDND1-212ENST00000506885 M0R2N6 131 aa7.42□□□□□ -1.22
CLDND1-212ENST00000506885 ATG7O95352 703 aa7.41□□□□□ -1.22
CLDND1-212ENST00000506885 STAU1O95793 577 aaKnown RBP7.41□□□□□ -1.22
CLDND1-212ENST00000506885 PHKA2P46019 1235 aa7.41□□□□□ -1.22
CLDND1-212ENST00000506885 CCDC102BQ68D86 513 aa7.41□□□□□ -1.22
CLDND1-212ENST00000506885 B4GALNT3Q6L9W6 998 aa7.41□□□□□ -1.22
CLDND1-212ENST00000506885 LARP1Q6PKG0 1096 aaKnown RBP7.41□□□□□ -1.22
CLDND1-212ENST00000506885 TXNDC2Q86VQ3 553 aa7.41□□□□□ -1.22
CLDND1-212ENST00000506885 Q8N3U1 123 aa7.41□□□□□ -1.22
CLDND1-212ENST00000506885 OGFOD1Q8N543 542 aa7.41□□□□□ -1.22
CLDND1-212ENST00000506885 ZNF837Q96EG3 531 aaPredicted RBP7.41□□□□□ -1.22
CLDND1-212ENST00000506885 NUCKS1Q9H1E3 243 aaKnown RBP7.41□□□□□ -1.22
CLDND1-212ENST00000506885 ZNF358Q9NW07 568 aa7.41□□□□□ -1.22
CLDND1-212ENST00000506885 ZBTB7BO15156 539 aaPredicted RBP7.4□□□□□ -1.22
CLDND1-212ENST00000506885 PPM1GO15355 546 aaPredicted RBP7.4□□□□□ -1.22
CLDND1-212ENST00000506885 ERCC3P19447 782 aa7.4□□□□□ -1.22
CLDND1-212ENST00000506885 CANXP27824 592 aaKnown RBP7.4□□□□□ -1.22
CLDND1-212ENST00000506885 LMOD1P29536 600 aaPredicted RBP7.4□□□□□ -1.22
CLDND1-212ENST00000506885 DBN1Q16643 649 aa7.4□□□□□ -1.22
CLDND1-212ENST00000506885 NBPF1Q3BBV0 1214 aa7.4□□□□□ -1.22
CLDND1-212ENST00000506885 EFHC2Q5JST6 749 aa7.4□□□□□ -1.22
CLDND1-212ENST00000506885 ZNF385CQ66K41 422 aaPredicted RBP7.4□□□□□ -1.22
CLDND1-212ENST00000506885 KANK3Q6NY19 840 aa7.4□□□□□ -1.22
CLDND1-212ENST00000506885 SIX5Q8N196 739 aa7.4□□□□□ -1.22
CLDND1-212ENST00000506885 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.4□□□□□ -1.22
CLDND1-212ENST00000506885 TPCN2Q8NHX9 752 aa7.4□□□□□ -1.22
CLDND1-212ENST00000506885 PHF24Q9UPV7 400 aa7.4□□□□□ -1.22
CLDND1-212ENST00000506885 TATP17735 454 aaPredicted RBP7.39□□□□□ -1.23
CLDND1-212ENST00000506885 RASA1P20936 1047 aa7.39□□□□□ -1.23
CLDND1-212ENST00000506885 MSX1P28360 303 aa7.39□□□□□ -1.23
CLDND1-212ENST00000506885 IRS1P35568 1242 aa7.39□□□□□ -1.23
CLDND1-212ENST00000506885 PLA2G4AP47712 749 aa7.39□□□□□ -1.23
CLDND1-212ENST00000506885 CLDN10P78369 228 aa7.39□□□□□ -1.23
CLDND1-212ENST00000506885 RNFT1Q5M7Z0 435 aa7.39□□□□□ -1.23
CLDND1-212ENST00000506885 CUEDC1Q9NWM3 386 aaPredicted RBP7.39□□□□□ -1.23
CLDND1-212ENST00000506885 CABP1Q9NZU7 370 aa7.39□□□□□ -1.23
CLDND1-212ENST00000506885 SCHIP1Q9P0W5 487 aaPredicted RBP7.39□□□□□ -1.23
CLDND1-212ENST00000506885 NSFL1CQ9UNZ2 370 aaKnown RBP7.39□□□□□ -1.23
CLDND1-212ENST00000506885 CHMP3Q9Y3E7 222 aa7.39□□□□□ -1.23
CLDND1-212ENST00000506885 FIGNL1Q6PIW4 674 aa7.38□□□□□ -1.23
CLDND1-212ENST00000506885 WHAMMQ8TF30 809 aa7.38□□□□□ -1.23
CLDND1-212ENST00000506885 AIDAQ96BJ3 306 aa7.38□□□□□ -1.23
CLDND1-212ENST00000506885 CFHR5Q9BXR6 569 aa7.38□□□□□ -1.23
CLDND1-212ENST00000506885 CRISPLD1Q9H336 500 aa7.38□□□□□ -1.23
CLDND1-212ENST00000506885 ZDHHC3Q9NYG2 299 aa7.38□□□□□ -1.23
CLDND1-212ENST00000506885 IQSEC3Q9UPP2 1182 aaPredicted RBP7.38□□□□□ -1.23
CLDND1-212ENST00000506885 TCF3P15923 654 aa7.37□□□□□ -1.23
CLDND1-212ENST00000506885 SEC13P55735 322 aa7.37□□□□□ -1.23
CLDND1-212ENST00000506885 SRSF11Q05519 484 aaKnown RBP7.37□□□□□ -1.23
CLDND1-212ENST00000506885 TEAD4Q15561 434 aa7.37□□□□□ -1.23
CLDND1-212ENST00000506885 DNAJC14Q6Y2X3 702 aaPredicted RBP7.37□□□□□ -1.23
CLDND1-212ENST00000506885 CCER1Q8TC90 406 aaPredicted RBP7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms