RNA–Protein interactions for RNA: ENST00000506832.6

GPATCH4-211, Transcript of G-patch domain containing 4, humanhuman

TSL 2

Gene GPATCH4, Length 1,029 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH4-211ENST00000506832 DCTN1Q14203 1278 aa17.14■□□□□ 0.33
GPATCH4-211ENST00000506832 BICDL1Q6ZP65 573 aa17.14■□□□□ 0.33
GPATCH4-211ENST00000506832 MCM10Q7L590 875 aa17.14■□□□□ 0.33
GPATCH4-211ENST00000506832 ZNF496Q96IT1 587 aaPredicted RBP17.14■□□□□ 0.33
GPATCH4-211ENST00000506832 KIF13BQ9NQT8 1826 aa17.14■□□□□ 0.33
GPATCH4-211ENST00000506832 FCHSD2O94868 740 aa17.13■□□□□ 0.33
GPATCH4-211ENST00000506832 SIPA1L3O60292 1781 aaPredicted RBP17.12■□□□□ 0.33
GPATCH4-211ENST00000506832 PIP4K2AP48426 406 aaPredicted RBP17.12■□□□□ 0.33
GPATCH4-211ENST00000506832 ZNF790Q6PG37 636 aa17.12■□□□□ 0.33
GPATCH4-211ENST00000506832 RTF1Q92541 710 aaKnown RBP17.12■□□□□ 0.33
GPATCH4-211ENST00000506832 SENP3-EIF4A1A0A087X0R7 540 aa17.11■□□□□ 0.33
GPATCH4-211ENST00000506832 BTBD11A6QL63 1104 aa17.11■□□□□ 0.33
GPATCH4-211ENST00000506832 CHRNA5P30532 468 aa17.11■□□□□ 0.33
GPATCH4-211ENST00000506832 HEG1Q9ULI3 1381 aa17.11■□□□□ 0.33
GPATCH4-211ENST00000506832 POLRMTO00411 1230 aaKnown RBP17.1■□□□□ 0.33
GPATCH4-211ENST00000506832 TGFB2P61812 414 aa17.1■□□□□ 0.33
GPATCH4-211ENST00000506832 ARHGAP27Q6ZUM4 889 aa17.1■□□□□ 0.33
GPATCH4-211ENST00000506832 STARD3NLO95772 234 aa17.09■□□□□ 0.33
GPATCH4-211ENST00000506832 C1QTNF8P60827 252 aa17.09■□□□□ 0.33
GPATCH4-211ENST00000506832 NFIXQ14938 502 aa17.09■□□□□ 0.33
GPATCH4-211ENST00000506832 CEMIPQ8WUJ3 1361 aa17.08■□□□□ 0.32
GPATCH4-211ENST00000506832 PRAMEF22A3QJZ6 481 aa17.08■□□□□ 0.32
GPATCH4-211ENST00000506832 VSIG10Q8N0Z9 540 aa17.08■□□□□ 0.32
GPATCH4-211ENST00000506832 FMNL2Q96PY5 1086 aa17.08■□□□□ 0.32
GPATCH4-211ENST00000506832 GPBP1L1Q9HC44 474 aaPredicted RBP17.08■□□□□ 0.32
GPATCH4-211ENST00000506832 NARFQ9UHQ1 456 aa17.08■□□□□ 0.32
GPATCH4-211ENST00000506832 TBC1D2BQ9UPU7 963 aa17.08■□□□□ 0.32
GPATCH4-211ENST00000506832 UTRNP46939 3433 aa17.08■□□□□ 0.32
GPATCH4-211ENST00000506832 A1BGP04217 495 aa17.07■□□□□ 0.32
GPATCH4-211ENST00000506832 NEFMP07197 916 aa17.07■□□□□ 0.32
GPATCH4-211ENST00000506832 CCDC24Q8N4L8 307 aa17.07■□□□□ 0.32
GPATCH4-211ENST00000506832 BCL2L12Q9HB09 334 aa17.07■□□□□ 0.32
GPATCH4-211ENST00000506832 ADCY9O60503 1353 aa17.06■□□□□ 0.32
GPATCH4-211ENST00000506832 CARMIL3Q8ND23 1372 aa17.06■□□□□ 0.32
GPATCH4-211ENST00000506832 AFDNP55196 1824 aaKnown RBP17.06■□□□□ 0.32
GPATCH4-211ENST00000506832 NPM2Q86SE8 214 aaKnown RBP17.06■□□□□ 0.32
GPATCH4-211ENST00000506832 MIS18AQ9NYP9 233 aa17.06■□□□□ 0.32
GPATCH4-211ENST00000506832 SCN7AQ01118 1682 aa17.06■□□□□ 0.32
GPATCH4-211ENST00000506832 SERPINB2P05120 415 aa17.05■□□□□ 0.32
GPATCH4-211ENST00000506832 TM4SF1P30408 202 aa17.05■□□□□ 0.32
GPATCH4-211ENST00000506832 DDX10Q13206 875 aaKnown RBP17.05■□□□□ 0.32
GPATCH4-211ENST00000506832 THUMPD2Q9BTF0 503 aaKnown RBP17.05■□□□□ 0.32
GPATCH4-211ENST00000506832 BRCA1P38398 1863 aaKnown RBP17.05■□□□□ 0.32
GPATCH4-211ENST00000506832 NPHP1O15259 732 aa17.04■□□□□ 0.32
GPATCH4-211ENST00000506832 TBC1D9BQ66K14 1250 aa17.04■□□□□ 0.32
GPATCH4-211ENST00000506832 PIM2Q9P1W9 311 aa17.04■□□□□ 0.32
GPATCH4-211ENST00000506832 KCNA3P22001 575 aa17.03■□□□□ 0.32
GPATCH4-211ENST00000506832 EIF5P55010 431 aaKnown RBP17.03■□□□□ 0.32
GPATCH4-211ENST00000506832 DALRD3Q5D0E6 543 aaKnown RBP17.03■□□□□ 0.32
GPATCH4-211ENST00000506832 USP16Q9Y5T5 823 aa17.03■□□□□ 0.32
GPATCH4-211ENST00000506832 MAPK8IP3Q9UPT6 1336 aa17.02■□□□□ 0.32
GPATCH4-211ENST00000506832 A0A087WZG4 1122 aa17.02■□□□□ 0.32
GPATCH4-211ENST00000506832 TEX13AQ9BXU3 409 aaPredicted RBP17.02■□□□□ 0.32
GPATCH4-211ENST00000506832 ZNF219Q9P2Y4 722 aaPredicted RBP17.02■□□□□ 0.32
GPATCH4-211ENST00000506832 DLG5Q8TDM6 1919 aa17.02■□□□□ 0.31
GPATCH4-211ENST00000506832 DZIP3Q86Y13 1208 aaKnown RBP17.01■□□□□ 0.31
GPATCH4-211ENST00000506832 GOLGB1Q14789 3259 aaKnown RBP17.01■□□□□ 0.31
GPATCH4-211ENST00000506832 RASSF7Q02833 373 aa17■□□□□ 0.31
GPATCH4-211ENST00000506832 C9orf131Q5VYM1 1079 aa17■□□□□ 0.31
GPATCH4-211ENST00000506832 C2CD5Q86YS7 1000 aa17■□□□□ 0.31
GPATCH4-211ENST00000506832 ARFGEF1Q9Y6D6 1849 aa17■□□□□ 0.31
GPATCH4-211ENST00000506832 NRXN2Q9P2S2 1712 aa16.99■□□□□ 0.31
GPATCH4-211ENST00000506832 FAM177BA6PVY3 158 aa16.99■□□□□ 0.31
GPATCH4-211ENST00000506832 IL6STP40189 918 aaPredicted RBP16.99■□□□□ 0.31
GPATCH4-211ENST00000506832 NGEFQ8N5V2 710 aa16.99■□□□□ 0.31
GPATCH4-211ENST00000506832 BCORQ6W2J9 1755 aa16.99■□□□□ 0.31
GPATCH4-211ENST00000506832 CAMTA2O94983 1202 aa16.98■□□□□ 0.31
GPATCH4-211ENST00000506832 SNRPA1P09661 255 aaKnown RBP16.98■□□□□ 0.31
GPATCH4-211ENST00000506832 RNF181Q9P0P0 153 aa16.98■□□□□ 0.31
GPATCH4-211ENST00000506832 TAF7Q15545 349 aaPredicted RBP16.97■□□□□ 0.31
GPATCH4-211ENST00000506832 NFE2L2Q16236 605 aa16.97■□□□□ 0.31
GPATCH4-211ENST00000506832 CCDC146Q8IYE0 955 aa16.97■□□□□ 0.31
GPATCH4-211ENST00000506832 ZNF622Q969S3 477 aaKnown RBP eCLIP16.97■□□□□ 0.31
GPATCH4-211ENST00000506832 PLEKHF1Q96S99 279 aa16.97■□□□□ 0.31
GPATCH4-211ENST00000506832 COL11A2P13942 1736 aaPredicted RBP16.96■□□□□ 0.31
GPATCH4-211ENST00000506832 PRR5LQ6MZQ0 368 aa16.96■□□□□ 0.31
GPATCH4-211ENST00000506832 CNBD1Q8NA66 436 aa16.96■□□□□ 0.31
GPATCH4-211ENST00000506832 RRP7AQ9Y3A4 280 aaKnown RBP16.96■□□□□ 0.31
GPATCH4-211ENST00000506832 LAMB4A4D0S4 1761 aa16.96■□□□□ 0.31
GPATCH4-211ENST00000506832 ANKRD31Q8N7Z5 1873 aa16.96■□□□□ 0.31
GPATCH4-211ENST00000506832 DLEC1Q9Y238 1755 aa16.95■□□□□ 0.3
GPATCH4-211ENST00000506832 H0YIN7 160 aa16.95■□□□□ 0.3
GPATCH4-211ENST00000506832 HTATSF1O43719 755 aaKnown RBP16.95■□□□□ 0.3
GPATCH4-211ENST00000506832 SETDB2Q96T68 719 aa16.95■□□□□ 0.3
GPATCH4-211ENST00000506832 NMRK2Q9NPI5 230 aa16.95■□□□□ 0.3
GPATCH4-211ENST00000506832 KDM3BQ7LBC6 1761 aa16.94■□□□□ 0.3
GPATCH4-211ENST00000506832 NBPF26B4DH59 902 aa16.94■□□□□ 0.3
GPATCH4-211ENST00000506832 RALBP1Q15311 655 aa16.94■□□□□ 0.3
GPATCH4-211ENST00000506832 NEUROD2Q15784 382 aa16.94■□□□□ 0.3
GPATCH4-211ENST00000506832 NBPF10Q6P3W6 841 aaKnown RBP16.94■□□□□ 0.3
GPATCH4-211ENST00000506832 NBPF15Q8N660 670 aa16.94■□□□□ 0.3
GPATCH4-211ENST00000506832 CACNA1SQ13698 1873 aa16.94■□□□□ 0.3
GPATCH4-211ENST00000506832 MYL6BP14649 208 aa16.93■□□□□ 0.3
GPATCH4-211ENST00000506832 ST5P78524 1137 aa16.93■□□□□ 0.3
GPATCH4-211ENST00000506832 TTLL6Q8N841 843 aa16.93■□□□□ 0.3
GPATCH4-211ENST00000506832 MYBBP1AQ9BQG0 1328 aaKnown RBP16.93■□□□□ 0.3
GPATCH4-211ENST00000506832 KIF3CO14782 793 aa16.92■□□□□ 0.3
GPATCH4-211ENST00000506832 NBPF5PQ86XG9 351 aaPredicted RBP16.92■□□□□ 0.3
GPATCH4-211ENST00000506832 RIPK4P57078 832 aa16.91■□□□□ 0.3
GPATCH4-211ENST00000506832 PNNQ9H307 717 aaKnown RBP16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms