RNA–Protein interactions for RNA: ENST00000506734.5

SMN2-206, Transcript of survival of motor neuron 2, centromeric, humanhuman

TSL 5

Gene SMN2, Length 1,550 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-206ENST00000506734 SIRT2Q8IXJ6 389 aa23.26■■□□□ 1.31
SMN2-206ENST00000506734 BARGINQ6ZT62 677 aa23.25■■□□□ 1.31
SMN2-206ENST00000506734 RPAP2Q8IXW5 612 aaPredicted RBP23.25■■□□□ 1.31
SMN2-206ENST00000506734 RBM19Q9Y4C8 960 aaKnown RBP23.25■■□□□ 1.31
SMN2-206ENST00000506734 ADCY9O60503 1353 aa23.25■■□□□ 1.31
SMN2-206ENST00000506734 ANXA1P04083 346 aa23.24■■□□□ 1.31
SMN2-206ENST00000506734 UNC5CLQ8IV45 518 aa23.24■■□□□ 1.31
SMN2-206ENST00000506734 ANKRD44Q8N8A2 993 aa23.24■■□□□ 1.31
SMN2-206ENST00000506734 DNAAF4Q8WXU2 420 aa23.24■■□□□ 1.31
SMN2-206ENST00000506734 GCC1Q96CN9 775 aa23.24■■□□□ 1.31
SMN2-206ENST00000506734 TMOD3Q9NYL9 352 aa23.24■■□□□ 1.31
SMN2-206ENST00000506734 ITGB4P16144 1822 aa23.23■■□□□ 1.31
SMN2-206ENST00000506734 PI4KAP2A4QPH2 592 aa23.23■■□□□ 1.31
SMN2-206ENST00000506734 GNAI3P08754 354 aa23.23■■□□□ 1.31
SMN2-206ENST00000506734 RGS3P49796 1198 aa23.23■■□□□ 1.31
SMN2-206ENST00000506734 CEP85Q6P2H3 762 aa23.23■■□□□ 1.31
SMN2-206ENST00000506734 PI4KAP1Q8N8J0 262 aa23.23■■□□□ 1.31
SMN2-206ENST00000506734 ERBB4Q15303 1308 aa23.22■■□□□ 1.31
SMN2-206ENST00000506734 BCL9LQ86UU0 1499 aa23.22■■□□□ 1.31
SMN2-206ENST00000506734 USP16Q9Y5T5 823 aa23.22■■□□□ 1.31
SMN2-206ENST00000506734 BEND3Q5T5X7 828 aa23.21■■□□□ 1.31
SMN2-206ENST00000506734 KSR2Q6VAB6 950 aa23.21■■□□□ 1.31
SMN2-206ENST00000506734 FNBP4Q8N3X1 1017 aaPredicted RBP23.21■■□□□ 1.31
SMN2-206ENST00000506734 SRCIN1Q9C0H9 1055 aa23.21■■□□□ 1.31
SMN2-206ENST00000506734 DDX58O95786 925 aaKnown RBP23.2■■□□□ 1.3
SMN2-206ENST00000506734 LRP10Q7Z4F1 713 aa23.2■■□□□ 1.3
SMN2-206ENST00000506734 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.2■■□□□ 1.3
SMN2-206ENST00000506734 GNAI2P04899 355 aa23.19■■□□□ 1.3
SMN2-206ENST00000506734 NUCB1Q02818 461 aa23.19■■□□□ 1.3
SMN2-206ENST00000506734 VPS72Q15906 364 aa23.19■■□□□ 1.3
SMN2-206ENST00000506734 DDB1Q16531 1140 aa23.19■■□□□ 1.3
SMN2-206ENST00000506734 BCL9O00512 1426 aa23.19■■□□□ 1.3
SMN2-206ENST00000506734 IBTKQ9P2D0 1353 aaPredicted RBP23.19■■□□□ 1.3
SMN2-206ENST00000506734 PIGBQ92521 554 aa23.18■■□□□ 1.3
SMN2-206ENST00000506734 NGLY1Q96IV0 654 aa23.18■■□□□ 1.3
SMN2-206ENST00000506734 C8orf37Q96NL8 207 aa23.18■■□□□ 1.3
SMN2-206ENST00000506734 USP44Q9H0E7 712 aa23.18■■□□□ 1.3
SMN2-206ENST00000506734 PDE4AP27815 886 aa23.18■■□□□ 1.3
SMN2-206ENST00000506734 BACH2Q9BYV9 841 aa23.18■■□□□ 1.3
SMN2-206ENST00000506734 MAP3K2Q9Y2U5 619 aa23.17■■□□□ 1.3
SMN2-206ENST00000506734 ALDH1L1O75891 902 aa23.16■■□□□ 1.3
SMN2-206ENST00000506734 VSIG10Q8N0Z9 540 aa23.16■■□□□ 1.3
SMN2-206ENST00000506734 DCTPP1Q9H773 170 aa23.16■■□□□ 1.3
SMN2-206ENST00000506734 CCDC9Q9Y3X0 531 aaKnown RBP23.16■■□□□ 1.3
SMN2-206ENST00000506734 DOT1LQ8TEK3 1739 aa23.16■■□□□ 1.3
SMN2-206ENST00000506734 HMMRO75330 724 aa23.14■■□□□ 1.3
SMN2-206ENST00000506734 MYL6BP14649 208 aa23.14■■□□□ 1.3
SMN2-206ENST00000506734 HSPA1LP34931 641 aa23.14■■□□□ 1.3
SMN2-206ENST00000506734 ATG3Q9NT62 314 aa23.14■■□□□ 1.3
SMN2-206ENST00000506734 UBTFL1P0CB47 393 aaPredicted RBP23.14■■□□□ 1.29
SMN2-206ENST00000506734 CHD1LQ86WJ1 897 aa23.14■■□□□ 1.29
SMN2-206ENST00000506734 XAGE3Q8WTP9 111 aa23.14■■□□□ 1.29
SMN2-206ENST00000506734 PTCD1O75127 700 aaKnown RBP23.13■■□□□ 1.29
SMN2-206ENST00000506734 FAM161AQ3B820 660 aa23.13■■□□□ 1.29
SMN2-206ENST00000506734 COPS6Q7L5N1 327 aa23.13■■□□□ 1.29
SMN2-206ENST00000506734 LINS1Q8NG48 757 aa23.13■■□□□ 1.29
SMN2-206ENST00000506734 ASAP1Q9ULH1 1129 aa23.13■■□□□ 1.29
SMN2-206ENST00000506734 AIMP1Q12904 312 aaKnown RBP23.12■■□□□ 1.29
SMN2-206ENST00000506734 TEX13AQ9BXU3 409 aaPredicted RBP23.12■■□□□ 1.29
SMN2-206ENST00000506734 MARCH10Q8NA82 808 aaPredicted RBP23.11■■□□□ 1.29
SMN2-206ENST00000506734 ATP8B2P98198 1209 aa23.1■■□□□ 1.29
SMN2-206ENST00000506734 RIC3Q7Z5B4 369 aa23.1■■□□□ 1.29
SMN2-206ENST00000506734 LRRFIP2Q9Y608 721 aaKnown RBP23.1■■□□□ 1.29
SMN2-206ENST00000506734 NBPF26B4DH59 902 aa23.1■■□□□ 1.29
SMN2-206ENST00000506734 C8orf34Q49A92 452 aa23.1■■□□□ 1.29
SMN2-206ENST00000506734 NBPF14Q5TI25 921 aa23.1■■□□□ 1.29
SMN2-206ENST00000506734 ANKRD45Q5TZF3 282 aa23.1■■□□□ 1.29
SMN2-206ENST00000506734 NBPF10Q6P3W6 841 aaKnown RBP23.1■■□□□ 1.29
SMN2-206ENST00000506734 ANKRD13DQ6ZTN6 518 aa23.1■■□□□ 1.29
SMN2-206ENST00000506734 NBPF15Q8N660 670 aa23.1■■□□□ 1.29
SMN2-206ENST00000506734 USP21Q9UK80 565 aa23.09■■□□□ 1.29
SMN2-206ENST00000506734 UTYO14607 1347 aa23.08■■□□□ 1.29
SMN2-206ENST00000506734 PRIM1P49642 420 aaKnown RBP23.08■■□□□ 1.29
SMN2-206ENST00000506734 METTL22Q9BUU2 404 aaPredicted RBP23.08■■□□□ 1.29
SMN2-206ENST00000506734 LNPKQ9C0E8 428 aa23.08■■□□□ 1.29
SMN2-206ENST00000506734 ARFGEF2Q9Y6D5 1785 aa23.08■■□□□ 1.29
SMN2-206ENST00000506734 NBPF7P0C2Y1 421 aaPredicted RBP23.07■■□□□ 1.28
SMN2-206ENST00000506734 FAM98CQ17RN3 349 aaKnown RBP23.07■■□□□ 1.28
SMN2-206ENST00000506734 PLBD2Q8NHP8 589 aa23.07■■□□□ 1.28
SMN2-206ENST00000506734 HDAC5Q9UQL6 1122 aa23.07■■□□□ 1.28
SMN2-206ENST00000506734 THSD7AQ9UPZ6 1657 aa23.07■■□□□ 1.28
SMN2-206ENST00000506734 PIP4K2AP48426 406 aaPredicted RBP23.06■■□□□ 1.28
SMN2-206ENST00000506734 NEXNQ0ZGT2 675 aa23.06■■□□□ 1.28
SMN2-206ENST00000506734 A1BGP04217 495 aa23.06■■□□□ 1.28
SMN2-206ENST00000506734 IGKV5-2P06315 115 aa23.06■■□□□ 1.28
SMN2-206ENST00000506734 NUP188Q5SRE5 1749 aa23.05■■□□□ 1.28
SMN2-206ENST00000506734 CWF19L2Q2TBE0 894 aaKnown RBP23.05■■□□□ 1.28
SMN2-206ENST00000506734 SYTL4Q96C24 671 aaPredicted RBP23.05■■□□□ 1.28
SMN2-206ENST00000506734 PNMA6EA0A0J9YXQ4 647 aa23.04■■□□□ 1.28
SMN2-206ENST00000506734 STARD3NLO95772 234 aa23.04■■□□□ 1.28
SMN2-206ENST00000506734 MEX3CQ5U5Q3 659 aaKnown RBP23.04■■□□□ 1.28
SMN2-206ENST00000506734 DNAJC10Q8IXB1 793 aa23.04■■□□□ 1.28
SMN2-206ENST00000506734 SSH3Q8TE77 659 aa23.04■■□□□ 1.28
SMN2-206ENST00000506734 C9orf78Q9NZ63 289 aaPredicted RBP23.04■■□□□ 1.28
SMN2-206ENST00000506734 KAT6BQ8WYB5 2073 aa23.04■■□□□ 1.28
SMN2-206ENST00000506734 NEURL1BA8MQ27 555 aa23.03■■□□□ 1.28
SMN2-206ENST00000506734 GRM8O00222 908 aa23.03■■□□□ 1.28
SMN2-206ENST00000506734 RBM42Q9BTD8 480 aaKnown RBP23.03■■□□□ 1.28
SMN2-206ENST00000506734 CICQ96RK0 1608 aaPredicted RBP23.02■■□□□ 1.28
SMN2-206ENST00000506734 TJP1Q07157 1748 aa23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 129.7 ms