RNA–Protein interactions for RNA: ENST00000506516.5

GYPB-206, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-206ENST00000506516 PALLDQ8WX93 1383 aa9.61□□□□□ -0.87
GYPB-206ENST00000506516 LOC102724428A0A0B4J2F2 783 aa9.6□□□□□ -0.87
GYPB-206ENST00000506516 SIK1P57059 783 aa9.6□□□□□ -0.87
GYPB-206ENST00000506516 ASTLQ6HA08 431 aaPredicted RBP9.6□□□□□ -0.87
GYPB-206ENST00000506516 IL17REQ8NFR9 667 aa9.6□□□□□ -0.87
GYPB-206ENST00000506516 PLEKHF1Q96S99 279 aa9.6□□□□□ -0.87
GYPB-206ENST00000506516 SLC52A2Q9HAB3 445 aa9.6□□□□□ -0.87
GYPB-206ENST00000506516 MAP3K5Q99683 1374 aa9.6□□□□□ -0.87
GYPB-206ENST00000506516 DOT1LQ8TEK3 1739 aa9.59□□□□□ -0.87
GYPB-206ENST00000506516 KDM6AO15550 1401 aaPredicted RBP9.59□□□□□ -0.87
GYPB-206ENST00000506516 ATP6V1AP38606 617 aa9.59□□□□□ -0.87
GYPB-206ENST00000506516 KCNQ4P56696 695 aa9.59□□□□□ -0.87
GYPB-206ENST00000506516 TFCP2L1Q9NZI6 479 aa9.59□□□□□ -0.87
GYPB-206ENST00000506516 ADAMTS8Q9UP79 889 aa9.59□□□□□ -0.87
GYPB-206ENST00000506516 KAT6BQ8WYB5 2073 aa9.59□□□□□ -0.87
GYPB-206ENST00000506516 BTAF1O14981 1849 aa9.59□□□□□ -0.88
GYPB-206ENST00000506516 RGPD3A6NKT7 1758 aaPredicted RBP9.58□□□□□ -0.88
GYPB-206ENST00000506516 RGPD4Q7Z3J3 1758 aa9.58□□□□□ -0.88
GYPB-206ENST00000506516 ATMINO43313 823 aaPredicted RBP9.58□□□□□ -0.88
GYPB-206ENST00000506516 NFE2L2Q16236 605 aa9.58□□□□□ -0.88
GYPB-206ENST00000506516 EFCAB3Q8N7B9 438 aa9.58□□□□□ -0.88
GYPB-206ENST00000506516 BTBD11A6QL63 1104 aa9.57□□□□□ -0.88
GYPB-206ENST00000506516 PTCD1O75127 700 aaKnown RBP9.57□□□□□ -0.88
GYPB-206ENST00000506516 RIPK4P57078 832 aa9.57□□□□□ -0.88
GYPB-206ENST00000506516 TTC5Q8N0Z6 440 aa9.57□□□□□ -0.88
GYPB-206ENST00000506516 RUNDC1Q96C34 613 aa9.57□□□□□ -0.88
GYPB-206ENST00000506516 TMEM106CQ9BVX2 250 aa9.57□□□□□ -0.88
GYPB-206ENST00000506516 MFRPQ9BY79 579 aa9.57□□□□□ -0.88
GYPB-206ENST00000506516 ANO8Q9HCE9 1232 aaPredicted RBP9.57□□□□□ -0.88
GYPB-206ENST00000506516 RREB1Q92766 1687 aa9.56□□□□□ -0.88
GYPB-206ENST00000506516 LMOD3Q0VAK6 560 aa9.56□□□□□ -0.88
GYPB-206ENST00000506516 SLC39A6Q13433 755 aa9.56□□□□□ -0.88
GYPB-206ENST00000506516 MCM10Q7L590 875 aa9.56□□□□□ -0.88
GYPB-206ENST00000506516 CCDC146Q8IYE0 955 aa9.56□□□□□ -0.88
GYPB-206ENST00000506516 FLAD1Q8NFF5 587 aa9.56□□□□□ -0.88
GYPB-206ENST00000506516 AK7Q96M32 723 aa9.56□□□□□ -0.88
GYPB-206ENST00000506516 MRS2Q9HD23 443 aa9.56□□□□□ -0.88
GYPB-206ENST00000506516 TRPC6Q9Y210 931 aa9.56□□□□□ -0.88
GYPB-206ENST00000506516 CEMIPQ8WUJ3 1361 aa9.55□□□□□ -0.88
GYPB-206ENST00000506516 TMPOP42166 694 aaKnown RBP9.55□□□□□ -0.88
GYPB-206ENST00000506516 DCTN1Q14203 1278 aa9.55□□□□□ -0.88
GYPB-206ENST00000506516 TAF7Q15545 349 aaPredicted RBP9.55□□□□□ -0.88
GYPB-206ENST00000506516 ZNF827Q17R98 1081 aa9.55□□□□□ -0.88
GYPB-206ENST00000506516 ZNF790Q6PG37 636 aa9.55□□□□□ -0.88
GYPB-206ENST00000506516 PELP1Q8IZL8 1130 aaKnown RBP9.55□□□□□ -0.88
GYPB-206ENST00000506516 PNISRQ8TF01 805 aaKnown RBP9.55□□□□□ -0.88
GYPB-206ENST00000506516 TOGARAM1Q9Y4F4 1720 aa9.55□□□□□ -0.88
GYPB-206ENST00000506516 NUP188Q5SRE5 1749 aa9.54□□□□□ -0.88
GYPB-206ENST00000506516 TIE1P35590 1138 aa9.54□□□□□ -0.88
GYPB-206ENST00000506516 GOLGA2Q08379 1002 aa9.54□□□□□ -0.88
GYPB-206ENST00000506516 ITPK1Q13572 414 aa9.54□□□□□ -0.88
GYPB-206ENST00000506516 NEUROD2Q15784 382 aa9.54□□□□□ -0.88
GYPB-206ENST00000506516 RC3H1Q5TC82 1133 aaKnown RBP9.54□□□□□ -0.88
GYPB-206ENST00000506516 LINC00116Q8NCU8 138 aa9.54□□□□□ -0.88
GYPB-206ENST00000506516 SLC16A10Q8TF71 515 aa9.54□□□□□ -0.88
GYPB-206ENST00000506516 FMNL2Q96PY5 1086 aa9.54□□□□□ -0.88
GYPB-206ENST00000506516 TEX13AQ9BXU3 409 aaPredicted RBP9.54□□□□□ -0.88
GYPB-206ENST00000506516 SPON1Q9HCB6 807 aa9.54□□□□□ -0.88
GYPB-206ENST00000506516 ITGB4P16144 1822 aa9.54□□□□□ -0.88
GYPB-206ENST00000506516 CCDC184Q52MB2 194 aa9.53□□□□□ -0.88
GYPB-206ENST00000506516 TRAPPC3LQ5T215 181 aa9.53□□□□□ -0.88
GYPB-206ENST00000506516 SLC4A9Q96Q91 983 aa9.53□□□□□ -0.88
GYPB-206ENST00000506516 MTFR1LQ9H019 292 aa9.53□□□□□ -0.88
GYPB-206ENST00000506516 BMP2KQ9NSY1 1161 aaPredicted RBP9.53□□□□□ -0.88
GYPB-206ENST00000506516 RTCBQ9Y3I0 505 aaKnown RBP9.53□□□□□ -0.88
GYPB-206ENST00000506516 LY75O60449 1722 aa9.53□□□□□ -0.88
GYPB-206ENST00000506516 GNPATO15228 680 aa9.52□□□□□ -0.89
GYPB-206ENST00000506516 ZBTB7AO95365 584 aa9.52□□□□□ -0.89
GYPB-206ENST00000506516 STARD3NLO95772 234 aa9.52□□□□□ -0.89
GYPB-206ENST00000506516 SSFA2P28290 1259 aa9.52□□□□□ -0.89
GYPB-206ENST00000506516 ATN1P54259 1190 aaPredicted RBP9.52□□□□□ -0.89
GYPB-206ENST00000506516 PDGFDQ9GZP0 370 aaPredicted RBP9.52□□□□□ -0.89
GYPB-206ENST00000506516 RRP7AQ9Y3A4 280 aaKnown RBP9.52□□□□□ -0.89
GYPB-206ENST00000506516 SCN11AQ9UI33 1791 aa9.52□□□□□ -0.89
GYPB-206ENST00000506516 MRC1P22897 1456 aa9.52□□□□□ -0.89
GYPB-206ENST00000506516 PNPLA7Q6ZV29 1317 aa9.52□□□□□ -0.89
GYPB-206ENST00000506516 CNTNAP4Q9C0A0 1308 aa9.52□□□□□ -0.89
GYPB-206ENST00000506516 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.51□□□□□ -0.89
GYPB-206ENST00000506516 APAF1O14727 1248 aa9.51□□□□□ -0.89
GYPB-206ENST00000506516 RPS6KA4O75676 772 aa9.51□□□□□ -0.89
GYPB-206ENST00000506516 PHF14O94880 888 aa9.51□□□□□ -0.89
GYPB-206ENST00000506516 COL23A1Q86Y22 540 aaPredicted RBP9.51□□□□□ -0.89
GYPB-206ENST00000506516 DNAJC10Q8IXB1 793 aa9.51□□□□□ -0.89
GYPB-206ENST00000506516 ZNF496Q96IT1 587 aaPredicted RBP9.51□□□□□ -0.89
GYPB-206ENST00000506516 BABAM1Q9NWV8 329 aa9.51□□□□□ -0.89
GYPB-206ENST00000506516 PPP1R1BQ9UD71 204 aaPredicted RBP9.51□□□□□ -0.89
GYPB-206ENST00000506516 KCNQ3O43525 872 aa9.5□□□□□ -0.89
GYPB-206ENST00000506516 SNRPA1P09661 255 aaKnown RBP9.5□□□□□ -0.89
GYPB-206ENST00000506516 CYP19A1P11511 503 aaPredicted RBP9.5□□□□□ -0.89
GYPB-206ENST00000506516 POLD1P28340 1107 aa9.5□□□□□ -0.89
GYPB-206ENST00000506516 RFC4P35249 363 aa9.5□□□□□ -0.89
GYPB-206ENST00000506516 CRKLP46109 303 aaKnown RBP9.5□□□□□ -0.89
GYPB-206ENST00000506516 CALD1Q05682 793 aaKnown RBP9.5□□□□□ -0.89
GYPB-206ENST00000506516 NPM2Q86SE8 214 aaKnown RBP9.5□□□□□ -0.89
GYPB-206ENST00000506516 FAM9BQ8IZU0 186 aa9.5□□□□□ -0.89
GYPB-206ENST00000506516 FBXO22Q8NEZ5 403 aa9.5□□□□□ -0.89
GYPB-206ENST00000506516 SLC39A7Q92504 469 aa9.5□□□□□ -0.89
GYPB-206ENST00000506516 THUMPD2Q9BTF0 503 aaKnown RBP9.5□□□□□ -0.89
GYPB-206ENST00000506516 MIS18AQ9NYP9 233 aa9.5□□□□□ -0.89
GYPB-206ENST00000506516 TSPYL4Q9UJ04 414 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms