RNA–Protein interactions for RNA: ENST00000506368.5

SCLT1-208, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-208ENST00000506368 NUTM2FA1L443 756 aa19.05■□□□□ 0.64
SCLT1-208ENST00000506368 SMTNL1A8MU46 457 aa19.05■□□□□ 0.64
SCLT1-208ENST00000506368 SIRT1Q96EB6 747 aa19.05■□□□□ 0.64
SCLT1-208ENST00000506368 AOX1Q06278 1338 aa19.04■□□□□ 0.64
SCLT1-208ENST00000506368 CHAMP1Q96JM3 812 aa19.04■□□□□ 0.64
SCLT1-208ENST00000506368 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.04■□□□□ 0.64
SCLT1-208ENST00000506368 CCDC66A2RUB6 948 aa19.04■□□□□ 0.64
SCLT1-208ENST00000506368 ZSCAN22P10073 491 aaPredicted RBP19.04■□□□□ 0.64
SCLT1-208ENST00000506368 TSC1Q92574 1164 aa19.04■□□□□ 0.64
SCLT1-208ENST00000506368 POLKQ9UBT6 870 aa19.04■□□□□ 0.64
SCLT1-208ENST00000506368 AATKQ6ZMQ8 1374 aa19.03■□□□□ 0.64
SCLT1-208ENST00000506368 ADGRL3Q9HAR2 1447 aa19.03■□□□□ 0.64
SCLT1-208ENST00000506368 SALL3Q9BXA9 1300 aa19.03■□□□□ 0.64
SCLT1-208ENST00000506368 MSH6P52701 1360 aa19.02■□□□□ 0.64
SCLT1-208ENST00000506368 CCDC192P0DO97 292 aa19.02■□□□□ 0.64
SCLT1-208ENST00000506368 CERKQ8TCT0 537 aa19.02■□□□□ 0.64
SCLT1-208ENST00000506368 PHACTR3Q96KR7 559 aa19.02■□□□□ 0.64
SCLT1-208ENST00000506368 U2AF2P26368 475 aaKnown RBP eCLIP19.02■□□□□ 0.63
SCLT1-208ENST00000506368 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.02■□□□□ 0.63
SCLT1-208ENST00000506368 MAP2P11137 1827 aaKnown RBP19.01■□□□□ 0.63
SCLT1-208ENST00000506368 ZNF771Q7L3S4 317 aaPredicted RBP19.01■□□□□ 0.63
SCLT1-208ENST00000506368 KCNF1Q9H3M0 494 aa19.01■□□□□ 0.63
SCLT1-208ENST00000506368 ELL2O00472 640 aaPredicted RBP19.01■□□□□ 0.63
SCLT1-208ENST00000506368 IL13P35225 146 aa19.01■□□□□ 0.63
SCLT1-208ENST00000506368 CTNNA3Q9UI47 895 aa19.01■□□□□ 0.63
SCLT1-208ENST00000506368 DDX41Q9UJV9 622 aaKnown RBP19.01■□□□□ 0.63
SCLT1-208ENST00000506368 MORC2Q9Y6X9 1032 aaPredicted RBP19.01■□□□□ 0.63
SCLT1-208ENST00000506368 SMARCA5O60264 1052 aaPredicted RBP19■□□□□ 0.63
SCLT1-208ENST00000506368 CHMLP26374 656 aa19■□□□□ 0.63
SCLT1-208ENST00000506368 CCT4P50991 539 aaKnown RBP19■□□□□ 0.63
SCLT1-208ENST00000506368 JARID2Q92833 1246 aaPredicted RBP19■□□□□ 0.63
SCLT1-208ENST00000506368 C19orf44Q9H6X5 657 aa19■□□□□ 0.63
SCLT1-208ENST00000506368 STAP2Q9UGK3 403 aa19■□□□□ 0.63
SCLT1-208ENST00000506368 SPDYE4A6NLX3 237 aa18.99■□□□□ 0.63
SCLT1-208ENST00000506368 HSPA4P34932 840 aa18.99■□□□□ 0.63
SCLT1-208ENST00000506368 NCBP1Q09161 790 aaKnown RBP18.99■□□□□ 0.63
SCLT1-208ENST00000506368 AEBP1Q8IUX7 1158 aa18.99■□□□□ 0.63
SCLT1-208ENST00000506368 FAM200AQ8TCP9 573 aa18.99■□□□□ 0.63
SCLT1-208ENST00000506368 THUMPD2Q9BTF0 503 aaKnown RBP18.99■□□□□ 0.63
SCLT1-208ENST00000506368 ANO2Q9NQ90 1003 aa18.99■□□□□ 0.63
SCLT1-208ENST00000506368 RGPD8O14715 1765 aaPredicted RBP18.99■□□□□ 0.63
SCLT1-208ENST00000506368 STX6O43752 255 aa18.99■□□□□ 0.63
SCLT1-208ENST00000506368 PYCARDQ9ULZ3 195 aa18.99■□□□□ 0.63
SCLT1-208ENST00000506368 ARHGEF10O15013 1369 aa18.98■□□□□ 0.63
SCLT1-208ENST00000506368 F13A1P00488 732 aa18.98■□□□□ 0.63
SCLT1-208ENST00000506368 C17orf53Q8N3J3 647 aaPredicted RBP18.98■□□□□ 0.63
SCLT1-208ENST00000506368 BBXQ8WY36 941 aaPredicted RBP18.98■□□□□ 0.63
SCLT1-208ENST00000506368 GDPD2Q9HCC8 539 aa18.98■□□□□ 0.63
SCLT1-208ENST00000506368 PALD1Q9ULE6 856 aa18.97■□□□□ 0.63
SCLT1-208ENST00000506368 CNPY2Q9Y2B0 182 aa18.97■□□□□ 0.63
SCLT1-208ENST00000506368 TCHHQ07283 1943 aa18.97■□□□□ 0.63
SCLT1-208ENST00000506368 CDK19Q9BWU1 502 aa18.97■□□□□ 0.63
SCLT1-208ENST00000506368 LRRCC1Q9C099 1032 aa18.97■□□□□ 0.63
SCLT1-208ENST00000506368 CCDC171Q6TFL3 1326 aa18.96■□□□□ 0.63
SCLT1-208ENST00000506368 WASLO00401 505 aaPredicted RBP18.96■□□□□ 0.63
SCLT1-208ENST00000506368 HMOX1P09601 288 aa18.96■□□□□ 0.63
SCLT1-208ENST00000506368 ATF3P18847 181 aa18.96■□□□□ 0.63
SCLT1-208ENST00000506368 MEIS3Q99687 375 aa18.96■□□□□ 0.63
SCLT1-208ENST00000506368 CAVIN2O95810 425 aa18.95■□□□□ 0.62
SCLT1-208ENST00000506368 SLC20A2Q08357 652 aa18.95■□□□□ 0.62
SCLT1-208ENST00000506368 FMN2Q9NZ56 1722 aa18.95■□□□□ 0.62
SCLT1-208ENST00000506368 CCDC112Q8NEF3 446 aa18.94■□□□□ 0.62
SCLT1-208ENST00000506368 LIMCH1Q9UPQ0 1083 aa18.94■□□□□ 0.62
SCLT1-208ENST00000506368 PRR36Q9H6K5 1346 aa18.94■□□□□ 0.62
SCLT1-208ENST00000506368 CHL1O00533 1208 aa18.94■□□□□ 0.62
SCLT1-208ENST00000506368 GNAI2P04899 355 aa18.94■□□□□ 0.62
SCLT1-208ENST00000506368 GTF2E1P29083 439 aaPredicted RBP18.94■□□□□ 0.62
SCLT1-208ENST00000506368 KRT222Q8N1A0 295 aa18.94■□□□□ 0.62
SCLT1-208ENST00000506368 SMC3Q9UQE7 1217 aa18.94■□□□□ 0.62
SCLT1-208ENST00000506368 EDC4Q6P2E9 1401 aaKnown RBP18.93■□□□□ 0.62
SCLT1-208ENST00000506368 ELP1O95163 1332 aa18.93■□□□□ 0.62
SCLT1-208ENST00000506368 NEMFO60524 1076 aa18.93■□□□□ 0.62
SCLT1-208ENST00000506368 SYT1P21579 422 aa18.93■□□□□ 0.62
SCLT1-208ENST00000506368 RNF20Q5VTR2 975 aa18.93■□□□□ 0.62
SCLT1-208ENST00000506368 RTF1Q92541 710 aaKnown RBP18.93■□□□□ 0.62
SCLT1-208ENST00000506368 SLFN14P0C7P3 912 aa18.93■□□□□ 0.62
SCLT1-208ENST00000506368 PLCB2Q00722 1185 aa18.93■□□□□ 0.62
SCLT1-208ENST00000506368 SLFNL1Q499Z3 407 aa18.93■□□□□ 0.62
SCLT1-208ENST00000506368 NRKQ7Z2Y5 1582 aa18.92■□□□□ 0.62
SCLT1-208ENST00000506368 RAD50Q92878 1312 aa18.92■□□□□ 0.62
SCLT1-208ENST00000506368 ZBTB7CA1YPR0 619 aa18.92■□□□□ 0.62
SCLT1-208ENST00000506368 FAM177BA6PVY3 158 aa18.92■□□□□ 0.62
SCLT1-208ENST00000506368 GIMAP6Q6P9H5 292 aa18.92■□□□□ 0.62
SCLT1-208ENST00000506368 MPNDQ8N594 471 aa18.92■□□□□ 0.62
SCLT1-208ENST00000506368 ZNF397Q8NF99 534 aaPredicted RBP18.92■□□□□ 0.62
SCLT1-208ENST00000506368 ZSCAN31Q96LW9 406 aaPredicted RBP18.92■□□□□ 0.62
SCLT1-208ENST00000506368 TTC14Q96N46 770 aa18.92■□□□□ 0.62
SCLT1-208ENST00000506368 MST1RQ04912 1400 aa18.92■□□□□ 0.62
SCLT1-208ENST00000506368 UBAP1LF5GYI3 381 aa18.91■□□□□ 0.62
SCLT1-208ENST00000506368 MAP3K11Q16584 847 aa18.91■□□□□ 0.62
SCLT1-208ENST00000506368 CADPS2Q86UW7 1296 aa18.91■□□□□ 0.62
SCLT1-208ENST00000506368 KIF18AQ8NI77 898 aa18.91■□□□□ 0.62
SCLT1-208ENST00000506368 TMEM51Q9NW97 253 aa18.91■□□□□ 0.62
SCLT1-208ENST00000506368 TRIM6-TRIM34B2RNG4 842 aa18.91■□□□□ 0.62
SCLT1-208ENST00000506368 APBB1O00213 710 aa18.91■□□□□ 0.62
SCLT1-208ENST00000506368 GNAI3P08754 354 aa18.91■□□□□ 0.62
SCLT1-208ENST00000506368 TNNT1P13805 278 aa18.91■□□□□ 0.62
SCLT1-208ENST00000506368 CDC25BP30305 580 aa18.91■□□□□ 0.62
SCLT1-208ENST00000506368 PIP4K2BP78356 416 aa18.91■□□□□ 0.62
SCLT1-208ENST00000506368 TERF2Q15554 542 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms