RNA–Protein interactions for RNA: ENST00000506137.1

HTT-203, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 781 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-203ENST00000506137 TBC1D2BQ9UPU7 963 aa10.77□□□□□ -0.69
HTT-203ENST00000506137 ZNF142P52746 1687 aaPredicted RBP10.76□□□□□ -0.69
HTT-203ENST00000506137 PES1O00541 588 aaKnown RBP10.76□□□□□ -0.69
HTT-203ENST00000506137 CTAGE5O15320 804 aa10.76□□□□□ -0.69
HTT-203ENST00000506137 LDHCP07864 332 aa10.76□□□□□ -0.69
HTT-203ENST00000506137 FOSL1P15407 271 aa10.76□□□□□ -0.69
HTT-203ENST00000506137 KCNA2P16389 499 aa10.76□□□□□ -0.69
HTT-203ENST00000506137 EIF5P55010 431 aaKnown RBP10.76□□□□□ -0.69
HTT-203ENST00000506137 LARP1BQ659C4 914 aaKnown RBP10.76□□□□□ -0.69
HTT-203ENST00000506137 ZNF784Q8NCA9 323 aaPredicted RBP10.76□□□□□ -0.69
HTT-203ENST00000506137 GOLGA1Q92805 767 aa10.76□□□□□ -0.69
HTT-203ENST00000506137 GLMNQ92990 594 aa10.76□□□□□ -0.69
HTT-203ENST00000506137 NLRP2Q9NX02 1062 aa10.76□□□□□ -0.69
HTT-203ENST00000506137 DDX56Q9NY93 547 aaKnown RBP10.76□□□□□ -0.69
HTT-203ENST00000506137 EP400Q96L91 3159 aa10.75□□□□□ -0.69
HTT-203ENST00000506137 IPO5O00410 1097 aaKnown RBP10.75□□□□□ -0.69
HTT-203ENST00000506137 RECKO95980 971 aa10.75□□□□□ -0.69
HTT-203ENST00000506137 CASP2P42575 452 aa10.75□□□□□ -0.69
HTT-203ENST00000506137 COL19A1Q14993 1142 aa10.75□□□□□ -0.69
HTT-203ENST00000506137 OTUD6AQ7L8S5 288 aa10.75□□□□□ -0.69
HTT-203ENST00000506137 NLGN1Q8N2Q7 840 aa10.75□□□□□ -0.69
HTT-203ENST00000506137 RNF217Q8TC41 542 aa10.75□□□□□ -0.69
HTT-203ENST00000506137 NEUROD6Q96NK8 337 aa10.75□□□□□ -0.69
HTT-203ENST00000506137 CCDC94Q9BW85 323 aaPredicted RBP10.75□□□□□ -0.69
HTT-203ENST00000506137 SEZ6LQ9BYH1 1024 aa10.75□□□□□ -0.69
HTT-203ENST00000506137 WRNQ14191 1432 aaPredicted RBP eCLIP10.75□□□□□ -0.69
HTT-203ENST00000506137 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.74□□□□□ -0.69
HTT-203ENST00000506137 IFRD1O00458 451 aaPredicted RBP10.74□□□□□ -0.69
HTT-203ENST00000506137 KIF5CO60282 957 aa10.74□□□□□ -0.69
HTT-203ENST00000506137 VAMP4O75379 141 aa10.74□□□□□ -0.69
HTT-203ENST00000506137 SH3D19Q5HYK7 790 aa10.74□□□□□ -0.69
HTT-203ENST00000506137 POLR3CQ9BUI4 534 aaPredicted RBP10.74□□□□□ -0.69
HTT-203ENST00000506137 TYW1Q9NV66 732 aaKnown RBP10.74□□□□□ -0.69
HTT-203ENST00000506137 LZTS1Q9Y250 596 aa10.74□□□□□ -0.69
HTT-203ENST00000506137 CEP83Q9Y592 693 aa10.74□□□□□ -0.69
HTT-203ENST00000506137 RGS12O14924 1447 aa10.74□□□□□ -0.69
HTT-203ENST00000506137 FAM135BQ49AJ0 1406 aa10.74□□□□□ -0.69
HTT-203ENST00000506137 FOSP01100 380 aaPredicted RBP10.73□□□□□ -0.69
HTT-203ENST00000506137 TPM2P07951 284 aa10.73□□□□□ -0.69
HTT-203ENST00000506137 GSE1Q14687 1217 aa10.73□□□□□ -0.69
HTT-203ENST00000506137 MTERF4Q7Z6M4 381 aaKnown RBP10.73□□□□□ -0.69
HTT-203ENST00000506137 PARP9Q8IXQ6 854 aa10.73□□□□□ -0.69
HTT-203ENST00000506137 CCDC89Q8N998 374 aa10.73□□□□□ -0.69
HTT-203ENST00000506137 SLC43A3Q8NBI5 491 aa10.73□□□□□ -0.69
HTT-203ENST00000506137 PIK3R5Q8WYR1 880 aa10.73□□□□□ -0.69
HTT-203ENST00000506137 ARPC5LQ9BPX5 153 aa10.73□□□□□ -0.69
HTT-203ENST00000506137 MINK1Q8N4C8 1332 aaPredicted RBP10.73□□□□□ -0.69
HTT-203ENST00000506137 WASHC2CQ9Y4E1 1318 aa10.73□□□□□ -0.69
HTT-203ENST00000506137 TRIM6-TRIM34B2RNG4 842 aa10.72□□□□□ -0.69
HTT-203ENST00000506137 MTA2O94776 668 aa10.72□□□□□ -0.69
HTT-203ENST00000506137 IPO7O95373 1038 aaKnown RBP10.72□□□□□ -0.69
HTT-203ENST00000506137 SRPK2P78362 688 aaKnown RBP10.72□□□□□ -0.69
HTT-203ENST00000506137 TMED1Q13445 227 aa10.72□□□□□ -0.69
HTT-203ENST00000506137 RGL3Q3MIN7 710 aa10.72□□□□□ -0.69
HTT-203ENST00000506137 PPP4R3BQ5MIZ7 849 aa10.72□□□□□ -0.69
HTT-203ENST00000506137 IQCEQ6IPM2 695 aa10.72□□□□□ -0.69
HTT-203ENST00000506137 SAMD3Q8N6K7 520 aa10.72□□□□□ -0.69
HTT-203ENST00000506137 SGIP1Q9BQI5 828 aa10.72□□□□□ -0.69
HTT-203ENST00000506137 TSPY26PQ9H489 355 aa10.72□□□□□ -0.69
HTT-203ENST00000506137 AVENQ9NQS1 362 aaPredicted RBP10.72□□□□□ -0.69
HTT-203ENST00000506137 ZNF652Q9Y2D9 606 aa10.72□□□□□ -0.69
HTT-203ENST00000506137 VWDEQ8N2E2 1590 aa10.72□□□□□ -0.69
HTT-203ENST00000506137 POLR1AO95602 1720 aaPredicted RBP10.72□□□□□ -0.69
HTT-203ENST00000506137 KIF3CO14782 793 aa10.71□□□□□ -0.69
HTT-203ENST00000506137 SYNMO15061 1565 aa10.71□□□□□ -0.69
HTT-203ENST00000506137 CCDC159P0C7I6 412 aa10.71□□□□□ -0.69
HTT-203ENST00000506137 PRELPP51888 382 aa10.71□□□□□ -0.69
HTT-203ENST00000506137 TERF1P54274 439 aa10.71□□□□□ -0.69
HTT-203ENST00000506137 NAP1L1P55209 391 aaKnown RBP10.71□□□□□ -0.69
HTT-203ENST00000506137 RAPGEF1Q13905 1077 aa10.71□□□□□ -0.69
HTT-203ENST00000506137 NPATQ14207 1427 aa10.71□□□□□ -0.69
HTT-203ENST00000506137 C9orf84Q5VXU9 1444 aa10.71□□□□□ -0.69
HTT-203ENST00000506137 TTLL5Q6EMB2 1281 aa10.71□□□□□ -0.69
HTT-203ENST00000506137 DZIP3Q86Y13 1208 aaKnown RBP10.71□□□□□ -0.69
HTT-203ENST00000506137 PRPF38AQ8NAV1 312 aaKnown RBP10.71□□□□□ -0.69
HTT-203ENST00000506137 ACRBPQ8NEB7 543 aa10.71□□□□□ -0.69
HTT-203ENST00000506137 FRMD6Q96NE9 622 aa10.71□□□□□ -0.69
HTT-203ENST00000506137 SRRTQ9BXP5 876 aaKnown RBP10.71□□□□□ -0.69
HTT-203ENST00000506137 IFT57Q9NWB7 429 aa10.71□□□□□ -0.69
HTT-203ENST00000506137 PRKAG2Q9UGJ0 569 aa10.71□□□□□ -0.69
HTT-203ENST00000506137 PHF8Q9UPP1 1060 aa10.71□□□□□ -0.69
HTT-203ENST00000506137 ATP10AO60312 1499 aa10.7□□□□□ -0.7
HTT-203ENST00000506137 KIF3BO15066 747 aa10.7□□□□□ -0.7
HTT-203ENST00000506137 NPHP1O15259 732 aa10.7□□□□□ -0.7
HTT-203ENST00000506137 DNAJC6O75061 913 aa10.7□□□□□ -0.7
HTT-203ENST00000506137 LDHAP00338 332 aaKnown RBP10.7□□□□□ -0.7
HTT-203ENST00000506137 HNRNPCP07910 306 aaKnown RBP eCLIP10.7□□□□□ -0.7
HTT-203ENST00000506137 CLK1P49759 484 aaKnown RBP10.7□□□□□ -0.7
HTT-203ENST00000506137 IFT88Q13099 833 aa10.7□□□□□ -0.7
HTT-203ENST00000506137 CCDC184Q52MB2 194 aa10.7□□□□□ -0.7
HTT-203ENST00000506137 MEX3CQ5U5Q3 659 aaKnown RBP10.7□□□□□ -0.7
HTT-203ENST00000506137 TTC39BQ5VTQ0 682 aaPredicted RBP10.7□□□□□ -0.7
HTT-203ENST00000506137 CHCHD4Q8N4Q1 142 aa10.7□□□□□ -0.7
HTT-203ENST00000506137 MIGA1Q8NAN2 632 aa10.7□□□□□ -0.7
HTT-203ENST00000506137 SPDYE1Q8NFV5 336 aaPredicted RBP10.7□□□□□ -0.7
HTT-203ENST00000506137 FRS2Q8WU20 508 aa10.7□□□□□ -0.7
HTT-203ENST00000506137 JDP2Q8WYK2 163 aa10.7□□□□□ -0.7
HTT-203ENST00000506137 MUC3BQ9H195 1237 aa10.7□□□□□ -0.7
HTT-203ENST00000506137 KLF15Q9UIH9 416 aa10.7□□□□□ -0.7
HTT-203ENST00000506137 CDK13Q14004 1512 aaKnown RBP10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms