RNA–Protein interactions for RNA: ENST00000505458.5

NFKB1-205, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-205ENST00000505458 NECTIN2Q92692 538 aa13.97□□□□□ -0.17
NFKB1-205ENST00000505458 CARD10Q9BWT7 1032 aa13.97□□□□□ -0.17
NFKB1-205ENST00000505458 ADCY9O60503 1353 aa13.97□□□□□ -0.17
NFKB1-205ENST00000505458 REC8O95072 547 aa13.97□□□□□ -0.17
NFKB1-205ENST00000505458 POLA2Q14181 598 aa13.97□□□□□ -0.17
NFKB1-205ENST00000505458 LINS1Q8NG48 757 aa13.97□□□□□ -0.17
NFKB1-205ENST00000505458 FMNL2Q96PY5 1086 aa13.97□□□□□ -0.17
NFKB1-205ENST00000505458 PHAXQ9H814 394 aaKnown RBP13.97□□□□□ -0.17
NFKB1-205ENST00000505458 LRRFIP2Q9Y608 721 aaKnown RBP13.97□□□□□ -0.17
NFKB1-205ENST00000505458 ZNF335Q9H4Z2 1342 aaPredicted RBP13.96□□□□□ -0.17
NFKB1-205ENST00000505458 PI4KAP2A4QPH2 592 aa13.96□□□□□ -0.17
NFKB1-205ENST00000505458 SNRPA1P09661 255 aaKnown RBP13.96□□□□□ -0.17
NFKB1-205ENST00000505458 ERC1Q8IUD2 1116 aa13.96□□□□□ -0.17
NFKB1-205ENST00000505458 PI4KAP1Q8N8J0 262 aa13.96□□□□□ -0.17
NFKB1-205ENST00000505458 STAP2Q9UGK3 403 aa13.96□□□□□ -0.17
NFKB1-205ENST00000505458 ERVV-2B6SEH9 535 aa13.95□□□□□ -0.18
NFKB1-205ENST00000505458 LARP1Q6PKG0 1096 aaKnown RBP13.95□□□□□ -0.18
NFKB1-205ENST00000505458 C5P01031 1676 aa13.95□□□□□ -0.18
NFKB1-205ENST00000505458 NEXNQ0ZGT2 675 aa13.95□□□□□ -0.18
NFKB1-205ENST00000505458 UTYO14607 1347 aa13.95□□□□□ -0.18
NFKB1-205ENST00000505458 DDX17Q92841 729 aaKnown RBP13.94□□□□□ -0.18
NFKB1-205ENST00000505458 KCNQ3O43525 872 aa13.94□□□□□ -0.18
NFKB1-205ENST00000505458 GSPT1P15170 499 aaKnown RBP13.94□□□□□ -0.18
NFKB1-205ENST00000505458 PDE1AP54750 535 aa13.94□□□□□ -0.18
NFKB1-205ENST00000505458 KIF1BPQ96EK5 621 aa13.94□□□□□ -0.18
NFKB1-205ENST00000505458 PAPPAQ13219 1627 aa13.94□□□□□ -0.18
NFKB1-205ENST00000505458 AHDC1Q5TGY3 1603 aaPredicted RBP13.94□□□□□ -0.18
NFKB1-205ENST00000505458 COL14A1Q05707 1796 aaKnown RBP13.94□□□□□ -0.18
NFKB1-205ENST00000505458 TUBGCP6Q96RT7 1819 aa13.94□□□□□ -0.18
NFKB1-205ENST00000505458 COL22A1Q8NFW1 1626 aaPredicted RBP13.94□□□□□ -0.18
NFKB1-205ENST00000505458 NKX1-1Q15270 411 aaPredicted RBP13.94□□□□□ -0.18
NFKB1-205ENST00000505458 UBR2Q8IWV8 1755 aa13.94□□□□□ -0.18
NFKB1-205ENST00000505458 CABP4P57796 275 aa13.93□□□□□ -0.18
NFKB1-205ENST00000505458 CHRNA2Q15822 529 aa13.93□□□□□ -0.18
NFKB1-205ENST00000505458 ZCRB1Q8TBF4 217 aaKnown RBP13.93□□□□□ -0.18
NFKB1-205ENST00000505458 CABLES1Q8TDN4 633 aa13.93□□□□□ -0.18
NFKB1-205ENST00000505458 TBC1D2Q9BYX2 928 aa13.93□□□□□ -0.18
NFKB1-205ENST00000505458 COL15A1P39059 1388 aa13.93□□□□□ -0.18
NFKB1-205ENST00000505458 SALL3Q9BXA9 1300 aa13.93□□□□□ -0.18
NFKB1-205ENST00000505458 MX1P20591 662 aa13.93□□□□□ -0.18
NFKB1-205ENST00000505458 TOM1L2Q6ZVM7 507 aa13.93□□□□□ -0.18
NFKB1-205ENST00000505458 PLEKHG5O94827 1062 aa13.93□□□□□ -0.18
NFKB1-205ENST00000505458 IL2RBP14784 551 aa13.93□□□□□ -0.18
NFKB1-205ENST00000505458 C9orf78Q9NZ63 289 aaPredicted RBP13.93□□□□□ -0.18
NFKB1-205ENST00000505458 MAP3K2Q9Y2U5 619 aa13.92□□□□□ -0.18
NFKB1-205ENST00000505458 CYP27B1O15528 508 aa13.92□□□□□ -0.18
NFKB1-205ENST00000505458 RABEP1Q15276 862 aa13.92□□□□□ -0.18
NFKB1-205ENST00000505458 NBR1Q14596 966 aa13.92□□□□□ -0.18
NFKB1-205ENST00000505458 PPP1R42Q7Z4L9 355 aa13.91□□□□□ -0.18
NFKB1-205ENST00000505458 CIZ1Q9ULV3 898 aaPredicted RBP13.91□□□□□ -0.18
NFKB1-205ENST00000505458 PLCH1Q4KWH8 1693 aa13.91□□□□□ -0.18
NFKB1-205ENST00000505458 PNMA6EA0A0J9YXQ4 647 aa13.91□□□□□ -0.18
NFKB1-205ENST00000505458 SDSP20132 328 aa13.91□□□□□ -0.18
NFKB1-205ENST00000505458 GPATCH3Q96I76 525 aa13.91□□□□□ -0.18
NFKB1-205ENST00000505458 NFATC2IPQ8NCF5 419 aa13.91□□□□□ -0.18
NFKB1-205ENST00000505458 EXOC6BQ9Y2D4 811 aa13.91□□□□□ -0.18
NFKB1-205ENST00000505458 ERC2O15083 957 aa13.9□□□□□ -0.18
NFKB1-205ENST00000505458 SRGAP3O43295 1099 aa13.9□□□□□ -0.18
NFKB1-205ENST00000505458 TTC41PQ6P2S7 1318 aa13.9□□□□□ -0.18
NFKB1-205ENST00000505458 USP42Q9H9J4 1324 aaKnown RBP13.9□□□□□ -0.18
NFKB1-205ENST00000505458 LRP6O75581 1613 aa13.9□□□□□ -0.18
NFKB1-205ENST00000505458 GRM8O00222 908 aa13.9□□□□□ -0.18
NFKB1-205ENST00000505458 RIC3Q7Z5B4 369 aa13.9□□□□□ -0.18
NFKB1-205ENST00000505458 MCCP23508 829 aa13.89□□□□□ -0.19
NFKB1-205ENST00000505458 CHMP5Q9NZZ3 219 aa13.89□□□□□ -0.19
NFKB1-205ENST00000505458 SURF6O75683 361 aaKnown RBP13.89□□□□□ -0.19
NFKB1-205ENST00000505458 SLC4A3P48751 1232 aa13.89□□□□□ -0.19
NFKB1-205ENST00000505458 SHANK3Q9BYB0 1731 aa13.89□□□□□ -0.19
NFKB1-205ENST00000505458 SMARCA5O60264 1052 aaPredicted RBP13.89□□□□□ -0.19
NFKB1-205ENST00000505458 GLI3P10071 1580 aa13.88□□□□□ -0.19
NFKB1-205ENST00000505458 EVA1CP58658 441 aa13.88□□□□□ -0.19
NFKB1-205ENST00000505458 PDIA6Q15084 440 aa13.88□□□□□ -0.19
NFKB1-205ENST00000505458 RHPN1Q8TCX5 695 aa13.88□□□□□ -0.19
NFKB1-205ENST00000505458 ZNF496Q96IT1 587 aaPredicted RBP13.88□□□□□ -0.19
NFKB1-205ENST00000505458 METTL22Q9BUU2 404 aaPredicted RBP13.88□□□□□ -0.19
NFKB1-205ENST00000505458 NFKBIBQ15653 356 aa13.88□□□□□ -0.19
NFKB1-205ENST00000505458 TNS2Q63HR2 1409 aa13.88□□□□□ -0.19
NFKB1-205ENST00000505458 AK9Q5TCS8 1911 aa13.88□□□□□ -0.19
NFKB1-205ENST00000505458 TEX13AQ9BXU3 409 aaPredicted RBP13.88□□□□□ -0.19
NFKB1-205ENST00000505458 APBB1O00213 710 aa13.87□□□□□ -0.19
NFKB1-205ENST00000505458 C16orf71Q8IYS4 520 aaPredicted RBP13.87□□□□□ -0.19
NFKB1-205ENST00000505458 ARFGEF2Q9Y6D5 1785 aa13.87□□□□□ -0.19
NFKB1-205ENST00000505458 ANTXR1Q9H6X2 564 aa13.87□□□□□ -0.19
NFKB1-205ENST00000505458 NBPF7P0C2Y1 421 aaPredicted RBP13.87□□□□□ -0.19
NFKB1-205ENST00000505458 CLASRPQ8N2M8 674 aaKnown RBP13.87□□□□□ -0.19
NFKB1-205ENST00000505458 PTMSP20962 102 aa13.86□□□□□ -0.19
NFKB1-205ENST00000505458 OS9Q13438 667 aaPredicted RBP13.86□□□□□ -0.19
NFKB1-205ENST00000505458 USP26Q9BXU7 913 aa13.86□□□□□ -0.19
NFKB1-205ENST00000505458 ANAPC15P60006 121 aa13.86□□□□□ -0.19
NFKB1-205ENST00000505458 AFDNP55196 1824 aaKnown RBP13.86□□□□□ -0.19
NFKB1-205ENST00000505458 PROSER3Q2NL68 480 aa13.86□□□□□ -0.19
NFKB1-205ENST00000505458 ANKRD13DQ6ZTN6 518 aa13.86□□□□□ -0.19
NFKB1-205ENST00000505458 PLBD2Q8NHP8 589 aa13.86□□□□□ -0.19
NFKB1-205ENST00000505458 OTUD7AQ8TE49 926 aaPredicted RBP13.86□□□□□ -0.19
NFKB1-205ENST00000505458 GLRX3O76003 335 aaKnown RBP13.85□□□□□ -0.19
NFKB1-205ENST00000505458 SLC39A6Q13433 755 aa13.85□□□□□ -0.19
NFKB1-205ENST00000505458 CDCA7Q9BWT1 371 aaPredicted RBP13.85□□□□□ -0.19
NFKB1-205ENST00000505458 ROBO1Q9Y6N7 1651 aa13.85□□□□□ -0.19
NFKB1-205ENST00000505458 K7ELQ4 463 aaPredicted RBP13.85□□□□□ -0.19
NFKB1-205ENST00000505458 ST18O60284 1047 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms