RNA–Protein interactions for RNA: ENST00000505346.5

SMN2-205, Transcript of survival of motor neuron 2, centromeric, humanhuman

TSL 3

Gene SMN2, Length 707 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-205ENST00000505346 CDCA7Q9BWT1 371 aaPredicted RBP8.18□□□□□ -1.1
SMN2-205ENST00000505346 PRR12Q9ULL5 1215 aa8.18□□□□□ -1.1
SMN2-205ENST00000505346 MAPTP10636 758 aaKnown RBP8.17□□□□□ -1.1
SMN2-205ENST00000505346 PLA2G4AP47712 749 aa8.17□□□□□ -1.1
SMN2-205ENST00000505346 TLR1Q15399 786 aa8.17□□□□□ -1.1
SMN2-205ENST00000505346 FCHSD1Q86WN1 690 aa8.17□□□□□ -1.1
SMN2-205ENST00000505346 PCMTD1Q96MG8 357 aaPredicted RBP8.17□□□□□ -1.1
SMN2-205ENST00000505346 KLF15Q9UIH9 416 aa8.17□□□□□ -1.1
SMN2-205ENST00000505346 CD33P20138 364 aa8.16□□□□□ -1.1
SMN2-205ENST00000505346 ALAS2P22557 587 aa8.16□□□□□ -1.1
SMN2-205ENST00000505346 PCBP4P57723 403 aaKnown RBP8.16□□□□□ -1.1
SMN2-205ENST00000505346 TNP2Q05952 138 aa8.16□□□□□ -1.1
SMN2-205ENST00000505346 USP4Q13107 963 aa8.16□□□□□ -1.1
SMN2-205ENST00000505346 FOXD4L6Q3SYB3 417 aaPredicted RBP8.16□□□□□ -1.1
SMN2-205ENST00000505346 ARSJQ5FYB0 599 aaPredicted RBP8.16□□□□□ -1.1
SMN2-205ENST00000505346 FOXD4L3Q6VB84 417 aaPredicted RBP8.16□□□□□ -1.1
SMN2-205ENST00000505346 TPSG1Q9NRR2 321 aa8.16□□□□□ -1.1
SMN2-205ENST00000505346 DNAAF2Q9NVR5 837 aaKnown RBP8.16□□□□□ -1.1
SMN2-205ENST00000505346 CEP126Q9P2H0 1117 aa8.16□□□□□ -1.1
SMN2-205ENST00000505346 DCDC2BA2VCK2 349 aa8.15□□□□□ -1.1
SMN2-205ENST00000505346 KHNYNO15037 678 aaKnown RBP8.15□□□□□ -1.1
SMN2-205ENST00000505346 DYRK3O43781 588 aa8.15□□□□□ -1.1
SMN2-205ENST00000505346 CCDC85AQ96PX6 553 aaPredicted RBP8.15□□□□□ -1.1
SMN2-205ENST00000505346 KRTAP4-12Q9BQ66 201 aa8.15□□□□□ -1.1
SMN2-205ENST00000505346 BTBD11A6QL63 1104 aa8.14□□□□□ -1.11
SMN2-205ENST00000505346 NIFKQ9BYG3 293 aaKnown RBP8.14□□□□□ -1.11
SMN2-205ENST00000505346 ETNK1Q9HBU6 452 aa8.14□□□□□ -1.11
SMN2-205ENST00000505346 GOPCQ9HD26 462 aa8.14□□□□□ -1.11
SMN2-205ENST00000505346 A0A1W2PNR3 127 aa8.13□□□□□ -1.11
SMN2-205ENST00000505346 ZNF468Q5VIY5 522 aaPredicted RBP8.13□□□□□ -1.11
SMN2-205ENST00000505346 GJA3Q9Y6H8 435 aa8.13□□□□□ -1.11
SMN2-205ENST00000505346 ATP4AP20648 1035 aa8.12□□□□□ -1.11
SMN2-205ENST00000505346 PRSS36Q5K4E3 855 aa8.12□□□□□ -1.11
SMN2-205ENST00000505346 NACC1Q96RE7 527 aa8.12□□□□□ -1.11
SMN2-205ENST00000505346 ELOA3CA0A087WX78 387 aaPredicted RBP8.11□□□□□ -1.11
SMN2-205ENST00000505346 ELOA3DA6NLF2 546 aaPredicted RBP8.11□□□□□ -1.11
SMN2-205ENST00000505346 TRIM28Q13263 835 aaKnown RBP8.11□□□□□ -1.11
SMN2-205ENST00000505346 NEUROD2Q15784 382 aa8.11□□□□□ -1.11
SMN2-205ENST00000505346 NBPF1Q3BBV0 1214 aa8.11□□□□□ -1.11
SMN2-205ENST00000505346 ELOA3BQ3SY89 546 aa8.11□□□□□ -1.11
SMN2-205ENST00000505346 ELOA3Q8NG57 546 aa8.11□□□□□ -1.11
SMN2-205ENST00000505346 SIRT1Q96EB6 747 aa8.11□□□□□ -1.11
SMN2-205ENST00000505346 STAU1O95793 577 aaKnown RBP8.1□□□□□ -1.11
SMN2-205ENST00000505346 TATP17735 454 aaPredicted RBP8.1□□□□□ -1.11
SMN2-205ENST00000505346 MARK1Q9P0L2 795 aa8.1□□□□□ -1.11
SMN2-205ENST00000505346 DOLKQ9UPQ8 538 aa8.1□□□□□ -1.11
SMN2-205ENST00000505346 NDUFB9Q9Y6M9 179 aa8.09□□□□□ -1.11
SMN2-205ENST00000505346 FAM157BP0CG42 384 aa8.08□□□□□ -1.12
SMN2-205ENST00000505346 IL27Q8NEV9 243 aa8.08□□□□□ -1.12
SMN2-205ENST00000505346 HCN2Q9UL51 889 aa8.08□□□□□ -1.12
SMN2-205ENST00000505346 APBB1O00213 710 aa8.07□□□□□ -1.12
SMN2-205ENST00000505346 INHAP05111 366 aa8.07□□□□□ -1.12
SMN2-205ENST00000505346 LAMC2Q13753 1193 aa8.07□□□□□ -1.12
SMN2-205ENST00000505346 TSGA10IPQ3SY00 556 aa8.07□□□□□ -1.12
SMN2-205ENST00000505346 SMTNP53814 917 aa8.06□□□□□ -1.12
SMN2-205ENST00000505346 GDF10P55107 478 aa8.06□□□□□ -1.12
SMN2-205ENST00000505346 LRP8Q14114 963 aa8.06□□□□□ -1.12
SMN2-205ENST00000505346 SLFNL1Q499Z3 407 aa8.06□□□□□ -1.12
SMN2-205ENST00000505346 SYT9Q86SS6 491 aa8.06□□□□□ -1.12
SMN2-205ENST00000505346 FAM229AH3BQW9 127 aa8.05□□□□□ -1.12
SMN2-205ENST00000505346 M0R082 166 aa8.05□□□□□ -1.12
SMN2-205ENST00000505346 OXLD1Q5BKU9 147 aa8.05□□□□□ -1.12
SMN2-205ENST00000505346 BICDL1Q6ZP65 573 aa8.05□□□□□ -1.12
SMN2-205ENST00000505346 ZNF417Q8TAU3 575 aa8.05□□□□□ -1.12
SMN2-205ENST00000505346 ZNF587Q96SQ5 575 aaPredicted RBP8.05□□□□□ -1.12
SMN2-205ENST00000505346 ZIC5Q96T25 663 aa8.05□□□□□ -1.12
SMN2-205ENST00000505346 ZDHHC3Q9NYG2 299 aa8.05□□□□□ -1.12
SMN2-205ENST00000505346 H2AFB1P0C5Y9 115 aa8.04□□□□□ -1.12
SMN2-205ENST00000505346 H2AFB2P0C5Z0 115 aa8.04□□□□□ -1.12
SMN2-205ENST00000505346 GRIK4Q16099 956 aa8.04□□□□□ -1.12
SMN2-205ENST00000505346 SAMD5Q5TGI4 173 aa8.04□□□□□ -1.12
SMN2-205ENST00000505346 BANK1Q8NDB2 785 aa8.04□□□□□ -1.12
SMN2-205ENST00000505346 C9orf172C9J069 976 aa8.03□□□□□ -1.12
SMN2-205ENST00000505346 SOCS7O14512 581 aa8.03□□□□□ -1.12
SMN2-205ENST00000505346 SIN3BO75182 1162 aa8.03□□□□□ -1.12
SMN2-205ENST00000505346 EIF4G2P78344 907 aaKnown RBP eCLIP8.03□□□□□ -1.12
SMN2-205ENST00000505346 PHTF2Q8N3S3 785 aa8.03□□□□□ -1.12
SMN2-205ENST00000505346 GOLGA2P5Q9HBQ8 144 aa8.03□□□□□ -1.12
SMN2-205ENST00000505346 PRDM6Q9NQX0 595 aa8.03□□□□□ -1.12
SMN2-205ENST00000505346 STRN4Q9NRL3 753 aa8.03□□□□□ -1.12
SMN2-205ENST00000505346 HYAL3O43820 417 aaPredicted RBP8.02□□□□□ -1.13
SMN2-205ENST00000505346 GPR37L1O60883 481 aa8.02□□□□□ -1.13
SMN2-205ENST00000505346 SCNN1DP51172 638 aa8.02□□□□□ -1.13
SMN2-205ENST00000505346 CABP1Q9NZU7 370 aa8.02□□□□□ -1.13
SMN2-205ENST00000505346 ADARB2-AS1A8MUL3 147 aa8.01□□□□□ -1.13
SMN2-205ENST00000505346 CDK2AP1O14519 115 aa8.01□□□□□ -1.13
SMN2-205ENST00000505346 EFSO43281 561 aa8.01□□□□□ -1.13
SMN2-205ENST00000505346 KRTAP9-9Q9BYP9 154 aa8.01□□□□□ -1.13
SMN2-205ENST00000505346 KRTAP9-4Q9BYQ2 154 aa8.01□□□□□ -1.13
SMN2-205ENST00000505346 SERTAD1Q9UHV2 236 aa8.01□□□□□ -1.13
SMN2-205ENST00000505346 TRAPPC3LQ5T215 181 aa8□□□□□ -1.13
SMN2-205ENST00000505346 MICALL1Q8N3F8 863 aa8□□□□□ -1.13
SMN2-205ENST00000505346 MDFIQ99750 246 aa8□□□□□ -1.13
SMN2-205ENST00000505346 NEUROD4Q9HD90 331 aa8□□□□□ -1.13
SMN2-205ENST00000505346 A6NJY4 79 aa7.99□□□□□ -1.13
SMN2-205ENST00000505346 NEUROD1Q13562 356 aa7.99□□□□□ -1.13
SMN2-205ENST00000505346 COL9A3Q14050 684 aaPredicted RBP7.99□□□□□ -1.13
SMN2-205ENST00000505346 MTMR14Q8NCE2 650 aa7.99□□□□□ -1.13
SMN2-205ENST00000505346 BRPF1P55201 1214 aaPredicted RBP7.98□□□□□ -1.13
SMN2-205ENST00000505346 NRG1Q02297 640 aaPredicted RBP7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms