RNA–Protein interactions for RNA: ENST00000505306.5

ITGA3-204, Transcript of integrin subunit alpha 3, humanhuman

TSL 2

Gene ITGA3, Length 5,479 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA3-204ENST00000505306 CHMP4BP1P59074 171 aa19.56■□□□□ 0.72
ITGA3-204ENST00000505306 CCDC152Q4G0S7 254 aa19.56■□□□□ 0.72
ITGA3-204ENST00000505306 PAF1Q8N7H5 531 aa19.56■□□□□ 0.72
ITGA3-204ENST00000505306 MX1P20591 662 aa19.55■□□□□ 0.72
ITGA3-204ENST00000505306 LDHCP07864 332 aa19.55■□□□□ 0.72
ITGA3-204ENST00000505306 RTCBQ9Y3I0 505 aaKnown RBP19.55■□□□□ 0.72
ITGA3-204ENST00000505306 SKAP1Q86WV1 359 aa19.55■□□□□ 0.72
ITGA3-204ENST00000505306 SSBP05455 408 aaKnown RBP eCLIP19.55■□□□□ 0.72
ITGA3-204ENST00000505306 NLRP3Q96P20 1036 aa19.55■□□□□ 0.72
ITGA3-204ENST00000505306 MYO1BO43795 1136 aa19.55■□□□□ 0.72
ITGA3-204ENST00000505306 MYCNP04198 464 aaPredicted RBP19.54■□□□□ 0.72
ITGA3-204ENST00000505306 CCDC96Q2M329 555 aa19.54■□□□□ 0.72
ITGA3-204ENST00000505306 FEZ1Q99689 392 aa19.54■□□□□ 0.72
ITGA3-204ENST00000505306 SEC63Q9UGP8 760 aaKnown RBP19.54■□□□□ 0.72
ITGA3-204ENST00000505306 JARID2Q92833 1246 aaPredicted RBP19.54■□□□□ 0.72
ITGA3-204ENST00000505306 PDRG1Q9NUG6 133 aa19.54■□□□□ 0.72
ITGA3-204ENST00000505306 U3KPZ7 1027 aaPredicted RBP19.54■□□□□ 0.72
ITGA3-204ENST00000505306 AKAP4Q5JQC9 854 aa19.54■□□□□ 0.72
ITGA3-204ENST00000505306 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.54■□□□□ 0.72
ITGA3-204ENST00000505306 ZRANB1Q9UGI0 708 aa19.53■□□□□ 0.72
ITGA3-204ENST00000505306 NIP7Q9Y221 180 aaKnown RBP eCLIP19.53■□□□□ 0.72
ITGA3-204ENST00000505306 CLEC11AQ9Y240 323 aa19.53■□□□□ 0.72
ITGA3-204ENST00000505306 PARP3Q9Y6F1 533 aa19.53■□□□□ 0.72
ITGA3-204ENST00000505306 SMARCA5O60264 1052 aaPredicted RBP19.53■□□□□ 0.72
ITGA3-204ENST00000505306 RANBP6O60518 1105 aaKnown RBP19.53■□□□□ 0.72
ITGA3-204ENST00000505306 RARSP54136 660 aaKnown RBP19.53■□□□□ 0.72
ITGA3-204ENST00000505306 GPS2Q13227 327 aa19.53■□□□□ 0.72
ITGA3-204ENST00000505306 ATP10AO60312 1499 aa19.53■□□□□ 0.72
ITGA3-204ENST00000505306 FIBPO43427 364 aa19.53■□□□□ 0.72
ITGA3-204ENST00000505306 HOMER1Q86YM7 354 aa19.53■□□□□ 0.72
ITGA3-204ENST00000505306 SIRT1Q96EB6 747 aa19.53■□□□□ 0.72
ITGA3-204ENST00000505306 PTPRCP08575 1304 aa19.52■□□□□ 0.72
ITGA3-204ENST00000505306 MAGEC2Q9UBF1 373 aaPredicted RBP19.52■□□□□ 0.72
ITGA3-204ENST00000505306 UBE2Q2Q8WVN8 375 aa19.52■□□□□ 0.72
ITGA3-204ENST00000505306 MBIPQ9NS73 344 aa19.52■□□□□ 0.72
ITGA3-204ENST00000505306 ITSN2Q9NZM3 1697 aa19.52■□□□□ 0.72
ITGA3-204ENST00000505306 ANKRD18AQ8IVF6 992 aa19.52■□□□□ 0.71
ITGA3-204ENST00000505306 KIF21AQ7Z4S6 1674 aa19.52■□□□□ 0.71
ITGA3-204ENST00000505306 PIK3R4Q99570 1358 aa19.51■□□□□ 0.71
ITGA3-204ENST00000505306 PRPF40AO75400 957 aaKnown RBP19.51■□□□□ 0.71
ITGA3-204ENST00000505306 XAGE3Q8WTP9 111 aa19.51■□□□□ 0.71
ITGA3-204ENST00000505306 GRM1Q13255 1194 aa19.51■□□□□ 0.71
ITGA3-204ENST00000505306 BAG3O95817 575 aa19.51■□□□□ 0.71
ITGA3-204ENST00000505306 WASF1Q92558 559 aa19.5■□□□□ 0.71
ITGA3-204ENST00000505306 WDR62O43379 1518 aa19.5■□□□□ 0.71
ITGA3-204ENST00000505306 AEBP1Q8IUX7 1158 aa19.5■□□□□ 0.71
ITGA3-204ENST00000505306 PDILTQ8N807 584 aa19.5■□□□□ 0.71
ITGA3-204ENST00000505306 BMP2KQ9NSY1 1161 aaPredicted RBP19.5■□□□□ 0.71
ITGA3-204ENST00000505306 LARP1BQ659C4 914 aaKnown RBP19.5■□□□□ 0.71
ITGA3-204ENST00000505306 COPS6Q7L5N1 327 aa19.5■□□□□ 0.71
ITGA3-204ENST00000505306 SPTY2D1Q68D10 685 aaPredicted RBP19.5■□□□□ 0.71
ITGA3-204ENST00000505306 IQCA1Q86XH1 822 aa19.5■□□□□ 0.71
ITGA3-204ENST00000505306 NUP160Q12769 1436 aa19.49■□□□□ 0.71
ITGA3-204ENST00000505306 EIF4A2Q14240 407 aaKnown RBP19.49■□□□□ 0.71
ITGA3-204ENST00000505306 ME1P48163 572 aa19.49■□□□□ 0.71
ITGA3-204ENST00000505306 SYCP1Q15431 976 aa19.49■□□□□ 0.71
ITGA3-204ENST00000505306 NFATC2IPQ8NCF5 419 aa19.49■□□□□ 0.71
ITGA3-204ENST00000505306 SNRKQ9NRH2 765 aa19.49■□□□□ 0.71
ITGA3-204ENST00000505306 STK32BQ9NY57 414 aa19.49■□□□□ 0.71
ITGA3-204ENST00000505306 MBD3O95983 291 aa19.49■□□□□ 0.71
ITGA3-204ENST00000505306 TNIP1Q15025 636 aa19.49■□□□□ 0.71
ITGA3-204ENST00000505306 ORAI2Q96SN7 254 aa19.49■□□□□ 0.71
ITGA3-204ENST00000505306 CABP5Q9NP86 173 aa19.49■□□□□ 0.71
ITGA3-204ENST00000505306 TPTE2Q6XPS3 522 aa19.48■□□□□ 0.71
ITGA3-204ENST00000505306 DZIP3Q86Y13 1208 aaKnown RBP19.48■□□□□ 0.71
ITGA3-204ENST00000505306 CHPF2Q9P2E5 772 aa19.48■□□□□ 0.71
ITGA3-204ENST00000505306 HMGN5P82970 282 aaKnown RBP19.48■□□□□ 0.71
ITGA3-204ENST00000505306 OGFOD1Q8N543 542 aa19.48■□□□□ 0.71
ITGA3-204ENST00000505306 CTCFLQ8NI51 663 aaPredicted RBP19.48■□□□□ 0.71
ITGA3-204ENST00000505306 FLT4P35916 1363 aa19.48■□□□□ 0.71
ITGA3-204ENST00000505306 PATL2C9JE40 543 aaKnown RBP19.48■□□□□ 0.71
ITGA3-204ENST00000505306 PDCL3Q9H2J4 239 aa19.48■□□□□ 0.71
ITGA3-204ENST00000505306 HLA-DOAP06340 250 aa19.48■□□□□ 0.71
ITGA3-204ENST00000505306 TEX35Q5T0J7 233 aa19.48■□□□□ 0.71
ITGA3-204ENST00000505306 HDAC9Q9UKV0 1011 aa19.48■□□□□ 0.71
ITGA3-204ENST00000505306 PIP4K2AP48426 406 aaPredicted RBP19.48■□□□□ 0.71
ITGA3-204ENST00000505306 UQCRHLA0A096LP55 91 aa19.47■□□□□ 0.71
ITGA3-204ENST00000505306 UQCRHP07919 91 aa19.47■□□□□ 0.71
ITGA3-204ENST00000505306 SCLT1Q96NL6 688 aa19.47■□□□□ 0.71
ITGA3-204ENST00000505306 NYXQ9GZU5 481 aa19.47■□□□□ 0.71
ITGA3-204ENST00000505306 MATR3P43243 847 aaKnown RBP eCLIP19.47■□□□□ 0.71
ITGA3-204ENST00000505306 TTF1Q15361 905 aaPredicted RBP19.47■□□□□ 0.71
ITGA3-204ENST00000505306 CDCA7Q9BWT1 371 aaPredicted RBP19.47■□□□□ 0.71
ITGA3-204ENST00000505306 RNF41Q9H4P4 317 aaPredicted RBP19.47■□□□□ 0.71
ITGA3-204ENST00000505306 SLAIN2Q9P270 581 aa19.47■□□□□ 0.71
ITGA3-204ENST00000505306 TRPM2O94759 1503 aa19.46■□□□□ 0.71
ITGA3-204ENST00000505306 FILIP1LQ4L180 1135 aa19.46■□□□□ 0.71
ITGA3-204ENST00000505306 ZSCAN31Q96LW9 406 aaPredicted RBP19.46■□□□□ 0.71
ITGA3-204ENST00000505306 BRPF1P55201 1214 aaPredicted RBP19.46■□□□□ 0.71
ITGA3-204ENST00000505306 C16orf71Q8IYS4 520 aaPredicted RBP19.46■□□□□ 0.71
ITGA3-204ENST00000505306 UTP14AQ9BVJ6 771 aaKnown RBP19.46■□□□□ 0.71
ITGA3-204ENST00000505306 TSPY26PQ9H489 355 aa19.46■□□□□ 0.71
ITGA3-204ENST00000505306 STIM1Q13586 685 aa19.46■□□□□ 0.71
ITGA3-204ENST00000505306 ZNF213O14771 459 aa19.45■□□□□ 0.7
ITGA3-204ENST00000505306 CASTP20810 708 aaKnown RBP19.45■□□□□ 0.7
ITGA3-204ENST00000505306 JDP2Q8WYK2 163 aa19.45■□□□□ 0.7
ITGA3-204ENST00000505306 PRPF40BQ6NWY9 871 aaKnown RBP19.45■□□□□ 0.7
ITGA3-204ENST00000505306 GOLIM4O00461 696 aa19.45■□□□□ 0.7
ITGA3-204ENST00000505306 GNPATO15228 680 aa19.45■□□□□ 0.7
ITGA3-204ENST00000505306 DCAF5Q96JK2 942 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms