RNA–Protein interactions for RNA: ENST00000505226.1

UBE3D-206, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 3,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-206ENST00000505226 WDR33Q9C0J8 1336 aaKnown RBP14.37□□□□□ -0.11
UBE3D-206ENST00000505226 CPA1P15085 419 aa14.37□□□□□ -0.11
UBE3D-206ENST00000505226 SSH3Q8TE77 659 aa14.37□□□□□ -0.11
UBE3D-206ENST00000505226 FMN2Q9NZ56 1722 aa14.37□□□□□ -0.11
UBE3D-206ENST00000505226 TSPOAP1O95153 1857 aa14.37□□□□□ -0.11
UBE3D-206ENST00000505226 RUFY3Q7L099 469 aa14.37□□□□□ -0.11
UBE3D-206ENST00000505226 USP25Q9UHP3 1055 aa14.37□□□□□ -0.11
UBE3D-206ENST00000505226 SOS1Q07889 1333 aaPredicted RBP14.37□□□□□ -0.11
UBE3D-206ENST00000505226 PPP1R42Q7Z4L9 355 aa14.37□□□□□ -0.11
UBE3D-206ENST00000505226 C17orf53Q8N3J3 647 aaPredicted RBP14.37□□□□□ -0.11
UBE3D-206ENST00000505226 PTMAP06454 111 aaKnown RBP14.36□□□□□ -0.11
UBE3D-206ENST00000505226 AK2P54819 239 aa14.36□□□□□ -0.11
UBE3D-206ENST00000505226 LSG1Q9H089 658 aaKnown RBP14.36□□□□□ -0.11
UBE3D-206ENST00000505226 SGSM2O43147 1006 aa14.36□□□□□ -0.11
UBE3D-206ENST00000505226 CYB5RLQ6IPT4 315 aa14.36□□□□□ -0.11
UBE3D-206ENST00000505226 SASS6Q6UVJ0 657 aa14.36□□□□□ -0.11
UBE3D-206ENST00000505226 TMEM87AQ8NBN3 555 aa14.36□□□□□ -0.11
UBE3D-206ENST00000505226 SYAP1Q96A49 352 aaPredicted RBP14.36□□□□□ -0.11
UBE3D-206ENST00000505226 SBNO1A3KN83 1393 aa14.36□□□□□ -0.11
UBE3D-206ENST00000505226 FLT4P35916 1363 aa14.36□□□□□ -0.11
UBE3D-206ENST00000505226 SURF6O75683 361 aaKnown RBP14.35□□□□□ -0.11
UBE3D-206ENST00000505226 LARGE1O95461 756 aa14.35□□□□□ -0.11
UBE3D-206ENST00000505226 UBTFL1P0CB47 393 aaPredicted RBP14.35□□□□□ -0.11
UBE3D-206ENST00000505226 ARID3AQ99856 593 aa14.35□□□□□ -0.11
UBE3D-206ENST00000505226 RAD50Q92878 1312 aa14.35□□□□□ -0.11
UBE3D-206ENST00000505226 HCLS1P14317 486 aaPredicted RBP14.35□□□□□ -0.11
UBE3D-206ENST00000505226 SYT1P21579 422 aa14.35□□□□□ -0.11
UBE3D-206ENST00000505226 AOX1Q06278 1338 aa14.35□□□□□ -0.11
UBE3D-206ENST00000505226 LRRC37A3O60309 1634 aa14.35□□□□□ -0.11
UBE3D-206ENST00000505226 GNAT3A8MTJ3 354 aa14.35□□□□□ -0.11
UBE3D-206ENST00000505226 DYNC1I1O14576 645 aa14.35□□□□□ -0.11
UBE3D-206ENST00000505226 LTKP29376 864 aa14.35□□□□□ -0.11
UBE3D-206ENST00000505226 TSC1Q92574 1164 aa14.35□□□□□ -0.11
UBE3D-206ENST00000505226 TTC12Q9H892 705 aaPredicted RBP14.35□□□□□ -0.11
UBE3D-206ENST00000505226 TMEM2Q9UHN6 1383 aa14.34□□□□□ -0.11
UBE3D-206ENST00000505226 NBPF7P0C2Y1 421 aaPredicted RBP14.34□□□□□ -0.11
UBE3D-206ENST00000505226 ZSCAN22P10073 491 aaPredicted RBP14.34□□□□□ -0.11
UBE3D-206ENST00000505226 AMPHP49418 695 aa14.34□□□□□ -0.11
UBE3D-206ENST00000505226 KIAA2012Q0VF49 1180 aa14.34□□□□□ -0.11
UBE3D-206ENST00000505226 POLA2Q14181 598 aa14.34□□□□□ -0.11
UBE3D-206ENST00000505226 RHPN1Q8TCX5 695 aa14.34□□□□□ -0.11
UBE3D-206ENST00000505226 SPG7Q9UQ90 795 aa14.34□□□□□ -0.11
UBE3D-206ENST00000505226 AP5Z1O43299 807 aa14.33□□□□□ -0.11
UBE3D-206ENST00000505226 ADCY5O95622 1261 aa14.33□□□□□ -0.11
UBE3D-206ENST00000505226 PTPRUQ92729 1446 aa14.33□□□□□ -0.11
UBE3D-206ENST00000505226 CCDC183Q5T5S1 534 aa14.33□□□□□ -0.12
UBE3D-206ENST00000505226 STX6O43752 255 aa14.33□□□□□ -0.12
UBE3D-206ENST00000505226 CWC27Q6UX04 472 aaKnown RBP14.33□□□□□ -0.12
UBE3D-206ENST00000505226 SLC26A8Q96RN1 970 aa14.33□□□□□ -0.12
UBE3D-206ENST00000505226 PHF14O94880 888 aa14.32□□□□□ -0.12
UBE3D-206ENST00000505226 COL9A3Q14050 684 aaPredicted RBP14.32□□□□□ -0.12
UBE3D-206ENST00000505226 NUTM2GQ5VZR2 741 aa14.32□□□□□ -0.12
UBE3D-206ENST00000505226 N4BP2Q86UW6 1770 aaPredicted RBP14.32□□□□□ -0.12
UBE3D-206ENST00000505226 SRGAP3O43295 1099 aa14.32□□□□□ -0.12
UBE3D-206ENST00000505226 FIBPO43427 364 aa14.32□□□□□ -0.12
UBE3D-206ENST00000505226 HTATSF1O43719 755 aaKnown RBP14.32□□□□□ -0.12
UBE3D-206ENST00000505226 ADCK5Q3MIX3 580 aa14.32□□□□□ -0.12
UBE3D-206ENST00000505226 FUCA2Q9BTY2 467 aa14.32□□□□□ -0.12
UBE3D-206ENST00000505226 NWD1Q149M9 1564 aa14.31□□□□□ -0.12
UBE3D-206ENST00000505226 EPB41L2O43491 1005 aaKnown RBP14.31□□□□□ -0.12
UBE3D-206ENST00000505226 TAF7Q15545 349 aaPredicted RBP14.31□□□□□ -0.12
UBE3D-206ENST00000505226 UVSSAQ2YD98 709 aa14.31□□□□□ -0.12
UBE3D-206ENST00000505226 GIMAP6Q6P9H5 292 aa14.31□□□□□ -0.12
UBE3D-206ENST00000505226 PIBF1Q8WXW3 757 aa14.31□□□□□ -0.12
UBE3D-206ENST00000505226 LIMCH1Q9UPQ0 1083 aa14.31□□□□□ -0.12
UBE3D-206ENST00000505226 F13A1P00488 732 aa14.31□□□□□ -0.12
UBE3D-206ENST00000505226 HDGFP51858 240 aaKnown RBP14.31□□□□□ -0.12
UBE3D-206ENST00000505226 PTH1RQ03431 593 aa14.31□□□□□ -0.12
UBE3D-206ENST00000505226 ST3GAL1Q11201 340 aa14.31□□□□□ -0.12
UBE3D-206ENST00000505226 NOLC1Q14978 699 aaKnown RBP eCLIP14.31□□□□□ -0.12
UBE3D-206ENST00000505226 HDGFL1Q5TGJ6 251 aa14.31□□□□□ -0.12
UBE3D-206ENST00000505226 HYPKQ9NX55 129 aa14.31□□□□□ -0.12
UBE3D-206ENST00000505226 RAB11FIP3O75154 756 aa14.3□□□□□ -0.12
UBE3D-206ENST00000505226 UBE2HP62256 183 aa14.3□□□□□ -0.12
UBE3D-206ENST00000505226 FAM184AQ8NB25 1140 aa14.3□□□□□ -0.12
UBE3D-206ENST00000505226 RGPD8O14715 1765 aaPredicted RBP14.3□□□□□ -0.12
UBE3D-206ENST00000505226 DDX54Q8TDD1 881 aaKnown RBP14.3□□□□□ -0.12
UBE3D-206ENST00000505226 MAP7D2Q96T17 732 aa14.3□□□□□ -0.12
UBE3D-206ENST00000505226 TTC21AQ8NDW8 1320 aa14.3□□□□□ -0.12
UBE3D-206ENST00000505226 PXDNLA1KZ92 1463 aa14.3□□□□□ -0.12
UBE3D-206ENST00000505226 CACNA1FO60840 1977 aa14.3□□□□□ -0.12
UBE3D-206ENST00000505226 CASTP20810 708 aaKnown RBP14.3□□□□□ -0.12
UBE3D-206ENST00000505226 DNM1Q05193 864 aaKnown RBP14.3□□□□□ -0.12
UBE3D-206ENST00000505226 USHBP1Q8N6Y0 703 aa14.3□□□□□ -0.12
UBE3D-206ENST00000505226 MYRIPQ8NFW9 859 aa14.3□□□□□ -0.12
UBE3D-206ENST00000505226 LTV1Q96GA3 475 aaPredicted RBP14.3□□□□□ -0.12
UBE3D-206ENST00000505226 UBR1Q8IWV7 1749 aa14.29□□□□□ -0.12
UBE3D-206ENST00000505226 PIK3C2AO00443 1686 aa14.29□□□□□ -0.12
UBE3D-206ENST00000505226 DIP2BQ9P265 1576 aa14.29□□□□□ -0.12
UBE3D-206ENST00000505226 TNRQ92752 1358 aa14.29□□□□□ -0.12
UBE3D-206ENST00000505226 MAP3K5Q99683 1374 aa14.29□□□□□ -0.12
UBE3D-206ENST00000505226 FAM177BA6PVY3 158 aa14.29□□□□□ -0.12
UBE3D-206ENST00000505226 EIF2S2P20042 333 aaKnown RBP14.29□□□□□ -0.12
UBE3D-206ENST00000505226 HOXC9P31274 260 aa14.29□□□□□ -0.12
UBE3D-206ENST00000505226 ZNF710Q8N1W2 664 aa14.29□□□□□ -0.12
UBE3D-206ENST00000505226 KDM4AO75164 1064 aa14.29□□□□□ -0.12
UBE3D-206ENST00000505226 CCDC83Q8IWF9 413 aa14.29□□□□□ -0.12
UBE3D-206ENST00000505226 ANXA1P04083 346 aa14.28□□□□□ -0.12
UBE3D-206ENST00000505226 NGDNQ8NEJ9 315 aaKnown RBP14.28□□□□□ -0.12
UBE3D-206ENST00000505226 KIF1BPQ96EK5 621 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms