RNA–Protein interactions for RNA: ENST00000504841.6

NPIPB3-203, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

APPRIS P1 TSL 1 (best)

Gene NPIPB3, Length 1,254 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-203ENST00000504841 ZNF831Q5JPB2 1677 aa9.5□□□□□ -0.89
NPIPB3-203ENST00000504841 TNRC6CQ9HCJ0 1690 aaKnown RBP9.49□□□□□ -0.89
NPIPB3-203ENST00000504841 C1orf141Q5JVX7 400 aa9.49□□□□□ -0.89
NPIPB3-203ENST00000504841 AEBP1Q8IUX7 1158 aa9.49□□□□□ -0.89
NPIPB3-203ENST00000504841 SMC1BQ8NDV3 1235 aa9.49□□□□□ -0.89
NPIPB3-203ENST00000504841 TJP1Q07157 1748 aa9.48□□□□□ -0.89
NPIPB3-203ENST00000504841 JMYQ8N9B5 988 aa9.48□□□□□ -0.89
NPIPB3-203ENST00000504841 NFATC2IPQ8NCF5 419 aa9.48□□□□□ -0.89
NPIPB3-203ENST00000504841 POLRMTO00411 1230 aaKnown RBP9.47□□□□□ -0.89
NPIPB3-203ENST00000504841 ZPR1O75312 459 aa9.47□□□□□ -0.89
NPIPB3-203ENST00000504841 AMOTQ4VCS5 1084 aa9.47□□□□□ -0.89
NPIPB3-203ENST00000504841 USPL1Q5W0Q7 1092 aa9.47□□□□□ -0.89
NPIPB3-203ENST00000504841 POTEHQ6S545 545 aa9.47□□□□□ -0.89
NPIPB3-203ENST00000504841 DNAJC10Q8IXB1 793 aa9.47□□□□□ -0.89
NPIPB3-203ENST00000504841 HSPA1AP0DMV8 641 aaKnown RBP9.46□□□□□ -0.9
NPIPB3-203ENST00000504841 HSPA1BP0DMV9 641 aaKnown RBP9.46□□□□□ -0.9
NPIPB3-203ENST00000504841 INTS5Q6P9B9 1019 aaKnown RBP9.46□□□□□ -0.9
NPIPB3-203ENST00000504841 TIAM2Q8IVF5 1701 aa9.45□□□□□ -0.9
NPIPB3-203ENST00000504841 SBF1O95248 1867 aa9.45□□□□□ -0.9
NPIPB3-203ENST00000504841 NFIXQ14938 502 aa9.45□□□□□ -0.9
NPIPB3-203ENST00000504841 SULT6B1Q6IMI4 303 aa9.45□□□□□ -0.9
NPIPB3-203ENST00000504841 VEGFAP15692 232 aaPredicted RBP9.44□□□□□ -0.9
NPIPB3-203ENST00000504841 LMNB1P20700 586 aa9.44□□□□□ -0.9
NPIPB3-203ENST00000504841 TM4SF1P30408 202 aa9.44□□□□□ -0.9
NPIPB3-203ENST00000504841 PRELPP51888 382 aa9.44□□□□□ -0.9
NPIPB3-203ENST00000504841 C2CD5Q86YS7 1000 aa9.44□□□□□ -0.9
NPIPB3-203ENST00000504841 SOS1Q07889 1333 aaPredicted RBP9.44□□□□□ -0.9
NPIPB3-203ENST00000504841 COL15A1P39059 1388 aa9.44□□□□□ -0.9
NPIPB3-203ENST00000504841 CARMIL3Q8ND23 1372 aa9.44□□□□□ -0.9
NPIPB3-203ENST00000504841 ADAMTS7Q9UKP4 1686 aa9.44□□□□□ -0.9
NPIPB3-203ENST00000504841 ZC3H4Q9UPT8 1303 aaKnown RBP9.43□□□□□ -0.9
NPIPB3-203ENST00000504841 GLTPD2A6NH11 291 aa9.43□□□□□ -0.9
NPIPB3-203ENST00000504841 SERPINB2P05120 415 aa9.43□□□□□ -0.9
NPIPB3-203ENST00000504841 SLC39A6Q13433 755 aa9.43□□□□□ -0.9
NPIPB3-203ENST00000504841 BICDL1Q6ZP65 573 aa9.43□□□□□ -0.9
NPIPB3-203ENST00000504841 MORC1Q86VD1 984 aa9.43□□□□□ -0.9
NPIPB3-203ENST00000504841 TTLL6Q8N841 843 aa9.43□□□□□ -0.9
NPIPB3-203ENST00000504841 ZBTB1Q9Y2K1 713 aa9.43□□□□□ -0.9
NPIPB3-203ENST00000504841 AFDNP55196 1824 aaKnown RBP9.42□□□□□ -0.9
NPIPB3-203ENST00000504841 SCN11AQ9UI33 1791 aa9.42□□□□□ -0.9
NPIPB3-203ENST00000504841 NFKBIEO00221 500 aa9.42□□□□□ -0.9
NPIPB3-203ENST00000504841 CYP19A1P11511 503 aaPredicted RBP9.42□□□□□ -0.9
NPIPB3-203ENST00000504841 CANXP27824 592 aaKnown RBP9.42□□□□□ -0.9
NPIPB3-203ENST00000504841 PANK3Q9H999 370 aa9.42□□□□□ -0.9
NPIPB3-203ENST00000504841 SLC52A2Q9HAB3 445 aa9.42□□□□□ -0.9
NPIPB3-203ENST00000504841 ZNF330Q9Y3S2 320 aaPredicted RBP9.42□□□□□ -0.9
NPIPB3-203ENST00000504841 DLEC1Q9Y238 1755 aa9.42□□□□□ -0.9
NPIPB3-203ENST00000504841 H0YIN7 160 aa9.41□□□□□ -0.9
NPIPB3-203ENST00000504841 AKAP4Q5JQC9 854 aa9.41□□□□□ -0.9
NPIPB3-203ENST00000504841 CCDC24Q8N4L8 307 aa9.41□□□□□ -0.9
NPIPB3-203ENST00000504841 ZNF622Q969S3 477 aaKnown RBP eCLIP9.41□□□□□ -0.92e-7■□□□□ 8.5
NPIPB3-203ENST00000504841 BCL2L12Q9HB09 334 aa9.41□□□□□ -0.9
NPIPB3-203ENST00000504841 MKRN1Q9UHC7 482 aaKnown RBP9.41□□□□□ -0.9
NPIPB3-203ENST00000504841 NARFQ9UHQ1 456 aa9.41□□□□□ -0.9
NPIPB3-203ENST00000504841 NRXN2Q9P2S2 1712 aa9.4□□□□□ -0.9
NPIPB3-203ENST00000504841 HMOX1P09601 288 aa9.4□□□□□ -0.9
NPIPB3-203ENST00000504841 DPY19L2Q6NUT2 758 aa9.4□□□□□ -0.9
NPIPB3-203ENST00000504841 LGR6Q9HBX8 967 aa9.4□□□□□ -0.9
NPIPB3-203ENST00000504841 CCDC88AQ3V6T2 1871 aa9.4□□□□□ -0.91
NPIPB3-203ENST00000504841 MRC1P22897 1456 aa9.4□□□□□ -0.91
NPIPB3-203ENST00000504841 NPHP1O15259 732 aa9.39□□□□□ -0.91
NPIPB3-203ENST00000504841 RNMTO43148 476 aaKnown RBP9.39□□□□□ -0.91
NPIPB3-203ENST00000504841 C21orf2O43822 256 aa9.39□□□□□ -0.91
NPIPB3-203ENST00000504841 IL13P35225 146 aa9.39□□□□□ -0.91
NPIPB3-203ENST00000504841 ERFEQ4G0M1 354 aa9.39□□□□□ -0.91
NPIPB3-203ENST00000504841 POTECB2RU33 542 aa9.38□□□□□ -0.91
NPIPB3-203ENST00000504841 TBC1D9BQ66K14 1250 aa9.38□□□□□ -0.91
NPIPB3-203ENST00000504841 TTC5Q8N0Z6 440 aa9.38□□□□□ -0.91
NPIPB3-203ENST00000504841 COL11A2P13942 1736 aaPredicted RBP9.38□□□□□ -0.91
NPIPB3-203ENST00000504841 ANKRD31Q8N7Z5 1873 aa9.37□□□□□ -0.91
NPIPB3-203ENST00000504841 DDNO94850 711 aaPredicted RBP9.37□□□□□ -0.91
NPIPB3-203ENST00000504841 POTEIP0CG38 1075 aa9.37□□□□□ -0.91
NPIPB3-203ENST00000504841 POTEJP0CG39 1038 aa9.37□□□□□ -0.91
NPIPB3-203ENST00000504841 HSPA5P11021 654 aaKnown RBP9.37□□□□□ -0.91
NPIPB3-203ENST00000504841 EIF4G2P78344 907 aaKnown RBP eCLIP9.37□□□□□ -0.91
NPIPB3-203ENST00000504841 CHADLQ6NUI6 762 aa9.37□□□□□ -0.91
NPIPB3-203ENST00000504841 TAOK3Q9H2K8 898 aa9.37□□□□□ -0.91
NPIPB3-203ENST00000504841 ZBTB12Q9Y330 459 aaPredicted RBP9.37□□□□□ -0.91
NPIPB3-203ENST00000504841 KNSTRNQ9Y448 316 aa9.37□□□□□ -0.91
NPIPB3-203ENST00000504841 VIRMAQ69YN4 1812 aaKnown RBP9.37□□□□□ -0.91
NPIPB3-203ENST00000504841 SCN7AQ01118 1682 aa9.36□□□□□ -0.91
NPIPB3-203ENST00000504841 STARD3NLO95772 234 aa9.36□□□□□ -0.91
NPIPB3-203ENST00000504841 PDE6BP35913 854 aa9.36□□□□□ -0.91
NPIPB3-203ENST00000504841 MTHFSDQ2M296 383 aaKnown RBP9.36□□□□□ -0.91
NPIPB3-203ENST00000504841 PRR5LQ6MZQ0 368 aa9.36□□□□□ -0.91
NPIPB3-203ENST00000504841 CREBZFQ9NS37 354 aa9.36□□□□□ -0.91
NPIPB3-203ENST00000504841 TBC1D2BQ9UPU7 963 aa9.36□□□□□ -0.91
NPIPB3-203ENST00000504841 CACNA1SQ13698 1873 aa9.36□□□□□ -0.91
NPIPB3-203ENST00000504841 UBR2Q8IWV8 1755 aa9.35□□□□□ -0.91
NPIPB3-203ENST00000504841 A0A087WZG4 1122 aa9.35□□□□□ -0.91
NPIPB3-203ENST00000504841 FOXN1O15353 648 aa9.35□□□□□ -0.91
NPIPB3-203ENST00000504841 VSIG10Q8N0Z9 540 aa9.35□□□□□ -0.91
NPIPB3-203ENST00000504841 CNBD1Q8NA66 436 aa9.35□□□□□ -0.91
NPIPB3-203ENST00000504841 FER1L6Q2WGJ9 1857 aa9.34□□□□□ -0.91
NPIPB3-203ENST00000504841 EIF5P55010 431 aaKnown RBP9.34□□□□□ -0.91
NPIPB3-203ENST00000504841 TEFQ10587 303 aa9.34□□□□□ -0.91
NPIPB3-203ENST00000504841 CNGB1Q14028 1251 aaPredicted RBP9.34□□□□□ -0.91
NPIPB3-203ENST00000504841 EAPPQ56P03 285 aaPredicted RBP9.34□□□□□ -0.91
NPIPB3-203ENST00000504841 PRPF40BQ6NWY9 871 aaKnown RBP9.34□□□□□ -0.91
NPIPB3-203ENST00000504841 NPM2Q86SE8 214 aaKnown RBP9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms