RNA–Protein interactions for RNA: ENST00000504634.5

NEDD9-209, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 745 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-209ENST00000504634 COL15A1P39059 1388 aa16.39■□□□□ 0.21
NEDD9-209ENST00000504634 MYH14Q7Z406 1995 aaKnown RBP16.39■□□□□ 0.21
NEDD9-209ENST00000504634 DIAPH1O60610 1272 aaKnown RBP16.39■□□□□ 0.21
NEDD9-209ENST00000504634 MTHFSDQ2M296 383 aaKnown RBP16.39■□□□□ 0.21
NEDD9-209ENST00000504634 TTC5Q8N0Z6 440 aa16.39■□□□□ 0.21
NEDD9-209ENST00000504634 SERPINB2P05120 415 aa16.38■□□□□ 0.21
NEDD9-209ENST00000504634 CANXP27824 592 aaKnown RBP16.38■□□□□ 0.21
NEDD9-209ENST00000504634 STARD3NLO95772 234 aa16.37■□□□□ 0.21
NEDD9-209ENST00000504634 HTRA3P83110 453 aa16.37■□□□□ 0.21
NEDD9-209ENST00000504634 RASSF7Q02833 373 aa16.37■□□□□ 0.21
NEDD9-209ENST00000504634 CC2D1BQ5T0F9 858 aaKnown RBP16.37■□□□□ 0.21
NEDD9-209ENST00000504634 BICDL1Q6ZP65 573 aa16.37■□□□□ 0.21
NEDD9-209ENST00000504634 VSIG10Q8N0Z9 540 aa16.37■□□□□ 0.21
NEDD9-209ENST00000504634 TTLL6Q8N841 843 aa16.37■□□□□ 0.21
NEDD9-209ENST00000504634 TJP1Q07157 1748 aa16.36■□□□□ 0.21
NEDD9-209ENST00000504634 H0YIN7 160 aa16.36■□□□□ 0.21
NEDD9-209ENST00000504634 LMNB1P20700 586 aa16.36■□□□□ 0.21
NEDD9-209ENST00000504634 C2CD5Q86YS7 1000 aa16.36■□□□□ 0.21
NEDD9-209ENST00000504634 SMC1BQ8NDV3 1235 aa16.36■□□□□ 0.21
NEDD9-209ENST00000504634 KLRG1Q96E93 195 aa16.36■□□□□ 0.21
NEDD9-209ENST00000504634 A0A087WZG4 1122 aa16.35■□□□□ 0.21
NEDD9-209ENST00000504634 KIF7Q2M1P5 1343 aa16.35■□□□□ 0.21
NEDD9-209ENST00000504634 ZC3H4Q9UPT8 1303 aaKnown RBP16.35■□□□□ 0.21
NEDD9-209ENST00000504634 CNGB1Q14028 1251 aaPredicted RBP16.34■□□□□ 0.21
NEDD9-209ENST00000504634 BCL2L12Q9HB09 334 aa16.34■□□□□ 0.21
NEDD9-209ENST00000504634 ZNF330Q9Y3S2 320 aaPredicted RBP16.34■□□□□ 0.21
NEDD9-209ENST00000504634 MRC1P22897 1456 aa16.34■□□□□ 0.21
NEDD9-209ENST00000504634 BRCA1P38398 1863 aaKnown RBP16.33■□□□□ 0.21
NEDD9-209ENST00000504634 U2SURPO15042 1029 aaKnown RBP16.33■□□□□ 0.2
NEDD9-209ENST00000504634 TEFQ10587 303 aa16.33■□□□□ 0.2
NEDD9-209ENST00000504634 NPM2Q86SE8 214 aaKnown RBP16.33■□□□□ 0.2
NEDD9-209ENST00000504634 VEGFAP15692 232 aaPredicted RBP16.32■□□□□ 0.2
NEDD9-209ENST00000504634 SCN11AQ9UI33 1791 aa16.32■□□□□ 0.2
NEDD9-209ENST00000504634 ARFGEF1Q9Y6D6 1849 aa16.32■□□□□ 0.2
NEDD9-209ENST00000504634 GLTPD2A6NH11 291 aa16.31■□□□□ 0.2
NEDD9-209ENST00000504634 EIF5P55010 431 aaKnown RBP16.31■□□□□ 0.2
NEDD9-209ENST00000504634 GAS2L2Q8NHY3 880 aa16.31■□□□□ 0.2
NEDD9-209ENST00000504634 ZNF622Q969S3 477 aaKnown RBP eCLIP16.31■□□□□ 0.2
NEDD9-209ENST00000504634 ZNF496Q96IT1 587 aaPredicted RBP16.31■□□□□ 0.2
NEDD9-209ENST00000504634 TEX13AQ9BXU3 409 aaPredicted RBP16.31■□□□□ 0.2
NEDD9-209ENST00000504634 GNAT3A8MTJ3 354 aa16.3■□□□□ 0.2
NEDD9-209ENST00000504634 NPHP1O15259 732 aa16.3■□□□□ 0.2
NEDD9-209ENST00000504634 ZNF790Q6PG37 636 aa16.3■□□□□ 0.2
NEDD9-209ENST00000504634 TBC1D2BQ9UPU7 963 aa16.3■□□□□ 0.2
NEDD9-209ENST00000504634 ADAMTS7Q9UKP4 1686 aa16.3■□□□□ 0.2
NEDD9-209ENST00000504634 CARMIL3Q8ND23 1372 aa16.29■□□□□ 0.2
NEDD9-209ENST00000504634 PER1O15534 1290 aaPredicted RBP16.29■□□□□ 0.2
NEDD9-209ENST00000504634 PDE6BP35913 854 aa16.29■□□□□ 0.2
NEDD9-209ENST00000504634 TBC1D9BQ66K14 1250 aa16.29■□□□□ 0.2
NEDD9-209ENST00000504634 JMYQ8N9B5 988 aa16.29■□□□□ 0.2
NEDD9-209ENST00000504634 BRIP1Q9BX63 1249 aa16.29■□□□□ 0.2
NEDD9-209ENST00000504634 ZNF219Q9P2Y4 722 aaPredicted RBP16.29■□□□□ 0.2
NEDD9-209ENST00000504634 PDZRN3Q9UPQ7 1066 aa16.29■□□□□ 0.2
NEDD9-209ENST00000504634 HEG1Q9ULI3 1381 aa16.28■□□□□ 0.2
NEDD9-209ENST00000504634 NFKBIEO00221 500 aa16.28■□□□□ 0.2
NEDD9-209ENST00000504634 PRELPP51888 382 aa16.28■□□□□ 0.2
NEDD9-209ENST00000504634 DPY19L2Q6NUT2 758 aa16.28■□□□□ 0.2
NEDD9-209ENST00000504634 CCDC24Q8N4L8 307 aa16.28■□□□□ 0.2
NEDD9-209ENST00000504634 IL17REQ8NFR9 667 aa16.28■□□□□ 0.2
NEDD9-209ENST00000504634 FMNL2Q96PY5 1086 aa16.28■□□□□ 0.2
NEDD9-209ENST00000504634 C21orf2O43822 256 aa16.27■□□□□ 0.2
NEDD9-209ENST00000504634 IL6STP40189 918 aaPredicted RBP16.27■□□□□ 0.2
NEDD9-209ENST00000504634 SETDB2Q96T68 719 aa16.27■□□□□ 0.2
NEDD9-209ENST00000504634 WDR90Q96KV7 1748 aa16.27■□□□□ 0.19
NEDD9-209ENST00000504634 ERFEQ4G0M1 354 aa16.26■□□□□ 0.19
NEDD9-209ENST00000504634 PRR5LQ6MZQ0 368 aa16.26■□□□□ 0.19
NEDD9-209ENST00000504634 A1BGP04217 495 aa16.25■□□□□ 0.19
NEDD9-209ENST00000504634 ST5P78524 1137 aa16.25■□□□□ 0.19
NEDD9-209ENST00000504634 COL13A1Q5TAT6 717 aaPredicted RBP16.25■□□□□ 0.19
NEDD9-209ENST00000504634 CNBD1Q8NA66 436 aa16.25■□□□□ 0.19
NEDD9-209ENST00000504634 TNRC6CQ9HCJ0 1690 aaKnown RBP16.24■□□□□ 0.19
NEDD9-209ENST00000504634 BTBD11A6QL63 1104 aa16.24■□□□□ 0.19
NEDD9-209ENST00000504634 CNKSR1Q969H4 720 aa16.24■□□□□ 0.19
NEDD9-209ENST00000504634 TAOK3Q9H2K8 898 aa16.24■□□□□ 0.19
NEDD9-209ENST00000504634 CFAP53Q96M91 514 aa16.23■□□□□ 0.19
NEDD9-209ENST00000504634 PCNTO95613 3336 aa16.23■□□□□ 0.19
NEDD9-209ENST00000504634 NRXN2Q9P2S2 1712 aa16.22■□□□□ 0.19
NEDD9-209ENST00000504634 CAMTA2O94983 1202 aa16.22■□□□□ 0.19
NEDD9-209ENST00000504634 PRKAR2BP31323 418 aa16.22■□□□□ 0.19
NEDD9-209ENST00000504634 DZIP3Q86Y13 1208 aaKnown RBP16.22■□□□□ 0.19
NEDD9-209ENST00000504634 TNS4Q8IZW8 715 aa16.22■□□□□ 0.19
NEDD9-209ENST00000504634 NPC1L1Q9UHC9 1359 aa16.22■□□□□ 0.19
NEDD9-209ENST00000504634 KCNQ3O43525 872 aa16.21■□□□□ 0.19
NEDD9-209ENST00000504634 CAPN15O75808 1086 aa16.21■□□□□ 0.19
NEDD9-209ENST00000504634 SOGA3Q5TF21 947 aa16.21■□□□□ 0.19
NEDD9-209ENST00000504634 STYK1Q6J9G0 422 aa16.21■□□□□ 0.19
NEDD9-209ENST00000504634 PHACTR3Q96KR7 559 aa16.21■□□□□ 0.19
NEDD9-209ENST00000504634 NUDCQ9Y266 331 aa16.21■□□□□ 0.19
NEDD9-209ENST00000504634 AFDNP55196 1824 aaKnown RBP16.21■□□□□ 0.19
NEDD9-209ENST00000504634 COL3A1P02461 1466 aaPredicted RBP16.21■□□□□ 0.19
NEDD9-209ENST00000504634 PRPF40BQ6NWY9 871 aaKnown RBP16.2■□□□□ 0.18
NEDD9-209ENST00000504634 NBPF5PQ86XG9 351 aaPredicted RBP16.2■□□□□ 0.18
NEDD9-209ENST00000504634 RTF1Q92541 710 aaKnown RBP16.2■□□□□ 0.18
NEDD9-209ENST00000504634 MASTLQ96GX5 879 aa16.2■□□□□ 0.18
NEDD9-209ENST00000504634 SBF1O95248 1867 aa16.19■□□□□ 0.18
NEDD9-209ENST00000504634 CEMIPQ8WUJ3 1361 aa16.19■□□□□ 0.18
NEDD9-209ENST00000504634 POTECB2RU33 542 aa16.19■□□□□ 0.18
NEDD9-209ENST00000504634 SRGNP10124 158 aa16.19■□□□□ 0.18
NEDD9-209ENST00000504634 PIP4K2AP48426 406 aaPredicted RBP16.19■□□□□ 0.18
NEDD9-209ENST00000504634 ZNF652Q9Y2D9 606 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms