RNA–Protein interactions for RNA: ENST00000504318.5

PDLIM7-211, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-211ENST00000504318 SCN7AQ01118 1682 aa18.72■□□□□ 0.59
PDLIM7-211ENST00000504318 TM4SF1P30408 202 aa18.71■□□□□ 0.59
PDLIM7-211ENST00000504318 TEFQ10587 303 aa18.71■□□□□ 0.59
PDLIM7-211ENST00000504318 KDM3BQ7LBC6 1761 aa18.7■□□□□ 0.58
PDLIM7-211ENST00000504318 EIF5P55010 431 aaKnown RBP18.7■□□□□ 0.58
PDLIM7-211ENST00000504318 MCM10Q7L590 875 aa18.7■□□□□ 0.58
PDLIM7-211ENST00000504318 PELP1Q8IZL8 1130 aaKnown RBP18.7■□□□□ 0.58
PDLIM7-211ENST00000504318 POLRMTO00411 1230 aaKnown RBP18.69■□□□□ 0.58
PDLIM7-211ENST00000504318 GRIN3BO60391 1043 aa18.69■□□□□ 0.58
PDLIM7-211ENST00000504318 DCTN1Q14203 1278 aa18.69■□□□□ 0.58
PDLIM7-211ENST00000504318 USPL1Q5W0Q7 1092 aa18.69■□□□□ 0.58
PDLIM7-211ENST00000504318 NARFQ9UHQ1 456 aa18.69■□□□□ 0.58
PDLIM7-211ENST00000504318 ADCY9O60503 1353 aa18.68■□□□□ 0.58
PDLIM7-211ENST00000504318 BCORQ6W2J9 1755 aa18.68■□□□□ 0.58
PDLIM7-211ENST00000504318 HTATSF1O43719 755 aaKnown RBP18.68■□□□□ 0.58
PDLIM7-211ENST00000504318 KCNA3P22001 575 aa18.68■□□□□ 0.58
PDLIM7-211ENST00000504318 ZEB1P37275 1124 aaPredicted RBP18.68■□□□□ 0.58
PDLIM7-211ENST00000504318 TTC5Q8N0Z6 440 aa18.68■□□□□ 0.58
PDLIM7-211ENST00000504318 ARFGEF1Q9Y6D6 1849 aa18.67■□□□□ 0.58
PDLIM7-211ENST00000504318 BTBD11A6QL63 1104 aa18.67■□□□□ 0.58
PDLIM7-211ENST00000504318 TGFB2P61812 414 aa18.67■□□□□ 0.58
PDLIM7-211ENST00000504318 DDX10Q13206 875 aaKnown RBP18.67■□□□□ 0.58
PDLIM7-211ENST00000504318 RALBP1Q15311 655 aa18.67■□□□□ 0.58
PDLIM7-211ENST00000504318 PRAMEF22A3QJZ6 481 aa18.66■□□□□ 0.58
PDLIM7-211ENST00000504318 FMNL2Q96PY5 1086 aa18.66■□□□□ 0.58
PDLIM7-211ENST00000504318 PARP3Q9Y6F1 533 aa18.66■□□□□ 0.58
PDLIM7-211ENST00000504318 NFIXQ14938 502 aa18.65■□□□□ 0.58
PDLIM7-211ENST00000504318 LAMB4A4D0S4 1761 aa18.65■□□□□ 0.58
PDLIM7-211ENST00000504318 DLEC1Q9Y238 1755 aa18.65■□□□□ 0.58
PDLIM7-211ENST00000504318 A0A0G2JLW4 131 aa18.64■□□□□ 0.57
PDLIM7-211ENST00000504318 DPEP1P16444 411 aa18.64■□□□□ 0.57
PDLIM7-211ENST00000504318 CANXP27824 592 aaKnown RBP18.64■□□□□ 0.57
PDLIM7-211ENST00000504318 TEX13AQ9BXU3 409 aaPredicted RBP18.64■□□□□ 0.57
PDLIM7-211ENST00000504318 WWC3Q9ULE0 1092 aa18.64■□□□□ 0.57
PDLIM7-211ENST00000504318 USP16Q9Y5T5 823 aa18.64■□□□□ 0.57
PDLIM7-211ENST00000504318 ANKRD31Q8N7Z5 1873 aa18.63■□□□□ 0.57
PDLIM7-211ENST00000504318 STARD3NLO95772 234 aa18.63■□□□□ 0.57
PDLIM7-211ENST00000504318 A1BGP04217 495 aa18.63■□□□□ 0.57
PDLIM7-211ENST00000504318 ZPR1O75312 459 aa18.62■□□□□ 0.57
PDLIM7-211ENST00000504318 IL6STP40189 918 aaPredicted RBP18.62■□□□□ 0.57
PDLIM7-211ENST00000504318 NFE2L2Q16236 605 aa18.62■□□□□ 0.57
PDLIM7-211ENST00000504318 MYBBP1AQ9BQG0 1328 aaKnown RBP18.61■□□□□ 0.57
PDLIM7-211ENST00000504318 RTF1Q92541 710 aaKnown RBP18.61■□□□□ 0.57
PDLIM7-211ENST00000504318 CARMIL3Q8ND23 1372 aa18.6■□□□□ 0.57
PDLIM7-211ENST00000504318 TAF7Q15545 349 aaPredicted RBP18.6■□□□□ 0.57
PDLIM7-211ENST00000504318 CAMTA2O94983 1202 aa18.59■□□□□ 0.57
PDLIM7-211ENST00000504318 ATP10DQ9P241 1426 aa18.58■□□□□ 0.57
PDLIM7-211ENST00000504318 NBPF26B4DH59 902 aa18.58■□□□□ 0.56
PDLIM7-211ENST00000504318 TBC1D9BQ66K14 1250 aa18.58■□□□□ 0.56
PDLIM7-211ENST00000504318 NBPF10Q6P3W6 841 aaKnown RBP18.58■□□□□ 0.56
PDLIM7-211ENST00000504318 NBPF15Q8N660 670 aa18.58■□□□□ 0.56
PDLIM7-211ENST00000504318 THUMPD2Q9BTF0 503 aaKnown RBP18.58■□□□□ 0.56
PDLIM7-211ENST00000504318 MIS18AQ9NYP9 233 aa18.58■□□□□ 0.56
PDLIM7-211ENST00000504318 COL11A2P13942 1736 aaPredicted RBP18.57■□□□□ 0.56
PDLIM7-211ENST00000504318 A0A087WZG4 1122 aa18.57■□□□□ 0.56
PDLIM7-211ENST00000504318 SNRPA1P09661 255 aaKnown RBP18.57■□□□□ 0.56
PDLIM7-211ENST00000504318 PIP4K2AP48426 406 aaPredicted RBP18.57■□□□□ 0.56
PDLIM7-211ENST00000504318 TBC1D2BQ9UPU7 963 aa18.57■□□□□ 0.56
PDLIM7-211ENST00000504318 SERPINB2P05120 415 aa18.56■□□□□ 0.56
PDLIM7-211ENST00000504318 CHRNA5P30532 468 aa18.56■□□□□ 0.56
PDLIM7-211ENST00000504318 PRKRIP1Q9H875 184 aaPredicted RBP18.56■□□□□ 0.56
PDLIM7-211ENST00000504318 SBF1O95248 1867 aa18.56■□□□□ 0.56
PDLIM7-211ENST00000504318 EIF4A1P60842 406 aaKnown RBP18.55■□□□□ 0.56
PDLIM7-211ENST00000504318 BCS1LQ9Y276 419 aa18.55■□□□□ 0.56
PDLIM7-211ENST00000504318 GIGYF1O75420 1035 aaPredicted RBP18.53■□□□□ 0.56
PDLIM7-211ENST00000504318 TMPOP42166 694 aaKnown RBP18.53■□□□□ 0.56
PDLIM7-211ENST00000504318 PIM2Q9P1W9 311 aa18.53■□□□□ 0.56
PDLIM7-211ENST00000504318 DZIP3Q86Y13 1208 aaKnown RBP18.52■□□□□ 0.56
PDLIM7-211ENST00000504318 PNNQ9H307 717 aaKnown RBP18.52■□□□□ 0.56
PDLIM7-211ENST00000504318 MAPK8IP3Q9UPT6 1336 aa18.51■□□□□ 0.55
PDLIM7-211ENST00000504318 PRR5LQ6MZQ0 368 aa18.51■□□□□ 0.55
PDLIM7-211ENST00000504318 PNISRQ8TF01 805 aaKnown RBP18.51■□□□□ 0.55
PDLIM7-211ENST00000504318 RGL2O15211 777 aa18.5■□□□□ 0.55
PDLIM7-211ENST00000504318 BICDL1Q6ZP65 573 aa18.5■□□□□ 0.55
PDLIM7-211ENST00000504318 ZNF330Q9Y3S2 320 aaPredicted RBP18.5■□□□□ 0.55
PDLIM7-211ENST00000504318 NUP98P52948 1817 aa18.5■□□□□ 0.55
PDLIM7-211ENST00000504318 ARFGEF2Q9Y6D5 1785 aa18.5■□□□□ 0.55
PDLIM7-211ENST00000504318 NEFMP07197 916 aa18.49■□□□□ 0.55
PDLIM7-211ENST00000504318 RIPK4P57078 832 aa18.49■□□□□ 0.55
PDLIM7-211ENST00000504318 DALRD3Q5D0E6 543 aaKnown RBP18.49■□□□□ 0.55
PDLIM7-211ENST00000504318 CLEC4GQ6UXB4 293 aa18.49■□□□□ 0.55
PDLIM7-211ENST00000504318 LRP10Q7Z4F1 713 aa18.49■□□□□ 0.55
PDLIM7-211ENST00000504318 TRIM35Q9UPQ4 493 aa18.49■□□□□ 0.55
PDLIM7-211ENST00000504318 C1QTNF8P60827 252 aa18.48■□□□□ 0.55
PDLIM7-211ENST00000504318 ADAMTS8Q9UP79 889 aa18.48■□□□□ 0.55
PDLIM7-211ENST00000504318 PRELPP51888 382 aa18.47■□□□□ 0.55
PDLIM7-211ENST00000504318 CCDC146Q8IYE0 955 aa18.47■□□□□ 0.55
PDLIM7-211ENST00000504318 FER1L6Q2WGJ9 1857 aa18.46■□□□□ 0.55
PDLIM7-211ENST00000504318 HLFQ16534 295 aa18.46■□□□□ 0.55
PDLIM7-211ENST00000504318 ARHGAP27Q6ZUM4 889 aa18.46■□□□□ 0.55
PDLIM7-211ENST00000504318 CCDC24Q8N4L8 307 aa18.46■□□□□ 0.55
PDLIM7-211ENST00000504318 RUNDC1Q96C34 613 aa18.46■□□□□ 0.55
PDLIM7-211ENST00000504318 BRIP1Q9BX63 1249 aa18.46■□□□□ 0.55
PDLIM7-211ENST00000504318 BABAM1Q9NWV8 329 aa18.46■□□□□ 0.55
PDLIM7-211ENST00000504318 RRP7AQ9Y3A4 280 aaKnown RBP18.46■□□□□ 0.55
PDLIM7-211ENST00000504318 SLX4Q8IY92 1834 aa18.46■□□□□ 0.55
PDLIM7-211ENST00000504318 PDIA6Q15084 440 aa18.45■□□□□ 0.54
PDLIM7-211ENST00000504318 C2CD5Q86YS7 1000 aa18.45■□□□□ 0.54
PDLIM7-211ENST00000504318 SETDB2Q96T68 719 aa18.45■□□□□ 0.54
PDLIM7-211ENST00000504318 TNRC6CQ9HCJ0 1690 aaKnown RBP18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms