RNA–Protein interactions for RNA: ENST00000503492.5

PCDH1-204, Transcript of protocadherin 1, humanhuman

TSL 5 BASIC

Gene PCDH1, Length 2,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-204ENST00000503492 SLC52A2Q9HAB3 445 aa27.78■■■□□ 2.04
PCDH1-204ENST00000503492 EIF5BO60841 1220 aaKnown RBP27.75■■■□□ 2.03
PCDH1-204ENST00000503492 SLC39A6Q13433 755 aa27.75■■■□□ 2.03
PCDH1-204ENST00000503492 PPP1R42Q7Z4L9 355 aa27.75■■■□□ 2.03
PCDH1-204ENST00000503492 POLA2Q14181 598 aa27.75■■■□□ 2.03
PCDH1-204ENST00000503492 ZNF790Q6PG37 636 aa27.75■■■□□ 2.03
PCDH1-204ENST00000503492 IFNL2Q8IZJ0 200 aa27.74■■■□□ 2.03
PCDH1-204ENST00000503492 MAP3K2Q9Y2U5 619 aa27.74■■■□□ 2.03
PCDH1-204ENST00000503492 NFATC2IPQ8NCF5 419 aa27.73■■■□□ 2.03
PCDH1-204ENST00000503492 KDM4FA0A1W2PPD8 638 aa27.73■■■□□ 2.03
PCDH1-204ENST00000503492 TSHZ3Q63HK5 1081 aa27.73■■■□□ 2.03
PCDH1-204ENST00000503492 KSR2Q6VAB6 950 aa27.73■■■□□ 2.03
PCDH1-204ENST00000503492 HYPKQ9NX55 129 aa27.72■■■□□ 2.03
PCDH1-204ENST00000503492 PLEKHG2Q9H7P9 1386 aa27.72■■■□□ 2.03
PCDH1-204ENST00000503492 CYP27B1O15528 508 aa27.72■■■□□ 2.03
PCDH1-204ENST00000503492 USP26Q9BXU7 913 aa27.72■■■□□ 2.03
PCDH1-204ENST00000503492 MX1P20591 662 aa27.71■■■□□ 2.03
PCDH1-204ENST00000503492 CASC1Q6TDU7 716 aa27.71■■■□□ 2.03
PCDH1-204ENST00000503492 ZNF335Q9H4Z2 1342 aaPredicted RBP27.71■■■□□ 2.03
PCDH1-204ENST00000503492 PDIA6Q15084 440 aa27.71■■■□□ 2.03
PCDH1-204ENST00000503492 RBM42Q9BTD8 480 aaKnown RBP27.71■■■□□ 2.03
PCDH1-204ENST00000503492 DDX21Q9NR30 783 aaKnown RBP eCLIP27.71■■■□□ 2.03
PCDH1-204ENST00000503492 PKD1L3Q7Z443 1732 aa27.7■■■□□ 2.03
PCDH1-204ENST00000503492 TUBGCP6Q96RT7 1819 aa27.7■■■□□ 2.03
PCDH1-204ENST00000503492 SRGAP3O43295 1099 aa27.7■■■□□ 2.02
PCDH1-204ENST00000503492 C5P01031 1676 aa27.69■■■□□ 2.02
PCDH1-204ENST00000503492 CD2BP2O95400 341 aaKnown RBP27.69■■■□□ 2.02
PCDH1-204ENST00000503492 SLAIN2Q9P270 581 aa27.69■■■□□ 2.02
PCDH1-204ENST00000503492 SURF6O75683 361 aaKnown RBP27.68■■■□□ 2.02
PCDH1-204ENST00000503492 ALDH1L1O75891 902 aa27.68■■■□□ 2.02
PCDH1-204ENST00000503492 STAP2Q9UGK3 403 aa27.68■■■□□ 2.02
PCDH1-204ENST00000503492 RAB11FIP3O75154 756 aa27.68■■■□□ 2.02
PCDH1-204ENST00000503492 DCAF5Q96JK2 942 aa27.68■■■□□ 2.02
PCDH1-204ENST00000503492 SOS2Q07890 1332 aaPredicted RBP27.68■■■□□ 2.02
PCDH1-204ENST00000503492 MRC1P22897 1456 aa27.68■■■□□ 2.02
PCDH1-204ENST00000503492 IL1RAPL2Q9NP60 686 aa27.67■■■□□ 2.02
PCDH1-204ENST00000503492 CHMP5Q9NZZ3 219 aa27.66■■■□□ 2.02
PCDH1-204ENST00000503492 ZNF496Q96IT1 587 aaPredicted RBP27.66■■■□□ 2.02
PCDH1-204ENST00000503492 CWF19L2Q2TBE0 894 aaKnown RBP27.65■■■□□ 2.02
PCDH1-204ENST00000503492 PRDM11Q9NQV5 511 aa27.65■■■□□ 2.02
PCDH1-204ENST00000503492 AIMP1Q12904 312 aaKnown RBP27.64■■■□□ 2.02
PCDH1-204ENST00000503492 RHPN1Q8TCX5 695 aa27.64■■■□□ 2.02
PCDH1-204ENST00000503492 C9orf78Q9NZ63 289 aaPredicted RBP27.64■■■□□ 2.02
PCDH1-204ENST00000503492 ERC2O15083 957 aa27.63■■■□□ 2.01
PCDH1-204ENST00000503492 DDX58O95786 925 aaKnown RBP27.63■■■□□ 2.01
PCDH1-204ENST00000503492 HSP90AB1P08238 724 aaKnown RBP27.63■■■□□ 2.01
PCDH1-204ENST00000503492 DDIT3P35638 169 aa27.63■■■□□ 2.01
PCDH1-204ENST00000503492 MTX1Q13505 466 aa27.63■■■□□ 2.01
PCDH1-204ENST00000503492 LINS1Q8NG48 757 aa27.63■■■□□ 2.01
PCDH1-204ENST00000503492 REC8O95072 547 aa27.62■■■□□ 2.01
PCDH1-204ENST00000503492 AOX1Q06278 1338 aa27.62■■■□□ 2.01
PCDH1-204ENST00000503492 WDR17Q8IZU2 1322 aa27.62■■■□□ 2.01
PCDH1-204ENST00000503492 NUTM1Q86Y26 1132 aa27.62■■■□□ 2.01
PCDH1-204ENST00000503492 K7ELQ4 463 aaPredicted RBP27.61■■■□□ 2.01
PCDH1-204ENST00000503492 GSE1Q14687 1217 aa27.61■■■□□ 2.01
PCDH1-204ENST00000503492 KIF1BPQ96EK5 621 aa27.61■■■□□ 2.01
PCDH1-204ENST00000503492 RABEP1Q15276 862 aa27.6■■■□□ 2.01
PCDH1-204ENST00000503492 MYL6BP14649 208 aa27.6■■■□□ 2.01
PCDH1-204ENST00000503492 TTC5Q8N0Z6 440 aa27.59■■■□□ 2.01
PCDH1-204ENST00000503492 USP16Q9Y5T5 823 aa27.59■■■□□ 2.01
PCDH1-204ENST00000503492 TRIM6-TRIM34B2RNG4 842 aa27.58■■■□□ 2.01
PCDH1-204ENST00000503492 SNRPA1P09661 255 aaKnown RBP27.58■■■□□ 2.01
PCDH1-204ENST00000503492 CABP4P57796 275 aa27.58■■■□□ 2.01
PCDH1-204ENST00000503492 TOM1L2Q6ZVM7 507 aa27.58■■■□□ 2.01
PCDH1-204ENST00000503492 UNC5CLQ8IV45 518 aa27.58■■■□□ 2.01
PCDH1-204ENST00000503492 RILPL2Q969X0 211 aa27.58■■■□□ 2.01
PCDH1-204ENST00000503492 UTYO14607 1347 aa27.58■■■□□ 2
PCDH1-204ENST00000503492 COL5A2P05997 1499 aaPredicted RBP27.57■■■□□ 2
PCDH1-204ENST00000503492 GRM8O00222 908 aa27.57■■■□□ 2
PCDH1-204ENST00000503492 HSP90AB4PQ58FF6 505 aa27.57■■■□□ 2
PCDH1-204ENST00000503492 RIC3Q7Z5B4 369 aa27.57■■■□□ 2
PCDH1-204ENST00000503492 XAGE3Q8WTP9 111 aa27.57■■■□□ 2
PCDH1-204ENST00000503492 IGKV5-2P06315 115 aa27.57■■■□□ 2
PCDH1-204ENST00000503492 FMNL2Q96PY5 1086 aa27.57■■■□□ 2
PCDH1-204ENST00000503492 ESYT1Q9BSJ8 1104 aa27.57■■■□□ 2
PCDH1-204ENST00000503492 PARP4Q9UKK3 1724 aaKnown RBP27.57■■■□□ 2
PCDH1-204ENST00000503492 CHMLP26374 656 aa27.56■■■□□ 2
PCDH1-204ENST00000503492 LRP10Q7Z4F1 713 aa27.56■■■□□ 2
PCDH1-204ENST00000503492 ABCA3Q99758 1704 aa27.56■■■□□ 2
PCDH1-204ENST00000503492 LARP1Q6PKG0 1096 aaKnown RBP27.56■■■□□ 2
PCDH1-204ENST00000503492 COPS6Q7L5N1 327 aa27.56■■■□□ 2
PCDH1-204ENST00000503492 KAZALD1Q96I82 304 aa27.56■■■□□ 2
PCDH1-204ENST00000503492 SUCLG2Q96I99 432 aa27.56■■■□□ 2
PCDH1-204ENST00000503492 HDAC5Q9UQL6 1122 aa27.56■■■□□ 2
PCDH1-204ENST00000503492 PI4K2BQ8TCG2 481 aa27.55■■■□□ 2
PCDH1-204ENST00000503492 ZCRB1Q8TBF4 217 aaKnown RBP27.54■■■□□ 2
PCDH1-204ENST00000503492 PIP4K2AP48426 406 aaPredicted RBP27.53■■■□□ 2
PCDH1-204ENST00000503492 GLI3P10071 1580 aa27.53■■■□□ 2
PCDH1-204ENST00000503492 PCDH11XQ9BZA7 1347 aa27.52■■■□□ 2
PCDH1-204ENST00000503492 PCDH11YQ9BZA8 1340 aa27.52■■■□□ 2
PCDH1-204ENST00000503492 OS9Q13438 667 aaPredicted RBP27.52■■■□□ 2
PCDH1-204ENST00000503492 PA2G4Q9UQ80 394 aaKnown RBP27.52■■■□□ 2
PCDH1-204ENST00000503492 MCM4P33991 863 aa27.51■■□□□ 1.99
PCDH1-204ENST00000503492 METTL22Q9BUU2 404 aaPredicted RBP27.51■■□□□ 1.99
PCDH1-204ENST00000503492 FOXD4L1Q9NU39 408 aa27.51■■□□□ 1.99
PCDH1-204ENST00000503492 CIZ1Q9ULV3 898 aaPredicted RBP27.51■■□□□ 1.99
PCDH1-204ENST00000503492 NEURL1BA8MQ27 555 aa27.51■■□□□ 1.99
PCDH1-204ENST00000503492 HSP90AA1P07900 732 aaKnown RBP27.51■■□□□ 1.99
PCDH1-204ENST00000503492 BICC1Q9H694 974 aaKnown RBP27.51■■□□□ 1.99
PCDH1-204ENST00000503492 NEXNQ0ZGT2 675 aa27.5■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms