RNA–Protein interactions for RNA: ENST00000503402.1

SEMA6A-204, Transcript of semaphorin 6A, humanhuman

TSL 3

Gene SEMA6A, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6A-204ENST00000503402 PPP1R15BQ5SWA1 713 aa9.75□□□□□ -0.85
SEMA6A-204ENST00000503402 IFFO2Q5TF58 517 aa9.75□□□□□ -0.85
SEMA6A-204ENST00000503402 USHBP1Q8N6Y0 703 aa9.75□□□□□ -0.85
SEMA6A-204ENST00000503402 CCNL1Q9UK58 526 aaPredicted RBP9.75□□□□□ -0.85
SEMA6A-204ENST00000503402 GOLGB1Q14789 3259 aaKnown RBP9.74□□□□□ -0.85
SEMA6A-204ENST00000503402 C5P01031 1676 aa9.74□□□□□ -0.85
SEMA6A-204ENST00000503402 SMIM5Q71RC9 77 aa9.74□□□□□ -0.85
SEMA6A-204ENST00000503402 HDGFL2Q7Z4V5 671 aaPredicted RBP9.74□□□□□ -0.85
SEMA6A-204ENST00000503402 COL23A1Q86Y22 540 aaPredicted RBP9.74□□□□□ -0.85
SEMA6A-204ENST00000503402 SLC16A10Q8TF71 515 aa9.74□□□□□ -0.85
SEMA6A-204ENST00000503402 BBXQ8WY36 941 aaPredicted RBP9.74□□□□□ -0.85
SEMA6A-204ENST00000503402 MAP3K19Q56UN5 1328 aa9.74□□□□□ -0.85
SEMA6A-204ENST00000503402 PDE4AP27815 886 aa9.73□□□□□ -0.85
SEMA6A-204ENST00000503402 IP6K1Q92551 441 aa9.73□□□□□ -0.85
SEMA6A-204ENST00000503402 TOGARAM1Q9Y4F4 1720 aa9.73□□□□□ -0.85
SEMA6A-204ENST00000503402 HOXC9P31274 260 aa9.72□□□□□ -0.85
SEMA6A-204ENST00000503402 CARD11Q9BXL7 1154 aa9.72□□□□□ -0.85
SEMA6A-204ENST00000503402 AMPHP49418 695 aa9.71□□□□□ -0.86
SEMA6A-204ENST00000503402 AMIGO3Q86WK7 504 aa9.71□□□□□ -0.86
SEMA6A-204ENST00000503402 ZCRB1Q8TBF4 217 aaKnown RBP9.71□□□□□ -0.86
SEMA6A-204ENST00000503402 OXER1Q8TDS5 423 aa9.71□□□□□ -0.86
SEMA6A-204ENST00000503402 LARP6Q9BRS8 491 aaKnown RBP9.71□□□□□ -0.86
SEMA6A-204ENST00000503402 USP47Q96K76 1375 aa9.71□□□□□ -0.86
SEMA6A-204ENST00000503402 TAF1LQ8IZX4 1826 aa9.7□□□□□ -0.86
SEMA6A-204ENST00000503402 CEP350Q5VT06 3117 aa9.7□□□□□ -0.86
SEMA6A-204ENST00000503402 PHF14O94880 888 aa9.7□□□□□ -0.86
SEMA6A-204ENST00000503402 RRS1Q15050 365 aaKnown RBP9.7□□□□□ -0.86
SEMA6A-204ENST00000503402 ADCY9O60503 1353 aa9.7□□□□□ -0.86
SEMA6A-204ENST00000503402 GRIN3BO60391 1043 aa9.69□□□□□ -0.86
SEMA6A-204ENST00000503402 C4BP0C0L5 1744 aa9.69□□□□□ -0.86
SEMA6A-204ENST00000503402 MFSD10Q14728 455 aa9.69□□□□□ -0.86
SEMA6A-204ENST00000503402 NBPF6Q5VWK0 638 aa9.69□□□□□ -0.86
SEMA6A-204ENST00000503402 POTEEQ6S8J3 1075 aa9.69□□□□□ -0.86
SEMA6A-204ENST00000503402 PALLDQ8WX93 1383 aa9.69□□□□□ -0.86
SEMA6A-204ENST00000503402 DDX27Q96GQ7 796 aaKnown RBP9.69□□□□□ -0.86
SEMA6A-204ENST00000503402 NBPF4Q96M43 638 aa9.69□□□□□ -0.86
SEMA6A-204ENST00000503402 GPBP1L1Q9HC44 474 aaPredicted RBP9.69□□□□□ -0.86
SEMA6A-204ENST00000503402 TERF2IPQ9NYB0 399 aa9.69□□□□□ -0.86
SEMA6A-204ENST00000503402 COG3Q96JB2 828 aa9.68□□□□□ -0.86
SEMA6A-204ENST00000503402 IGSF1Q8N6C5 1336 aa9.67□□□□□ -0.86
SEMA6A-204ENST00000503402 TBC1D12O60347 775 aa9.67□□□□□ -0.86
SEMA6A-204ENST00000503402 GGNBP2Q9H3C7 697 aa9.67□□□□□ -0.86
SEMA6A-204ENST00000503402 UBR3Q6ZT12 1888 aa9.67□□□□□ -0.86
SEMA6A-204ENST00000503402 ITGB4P16144 1822 aa9.67□□□□□ -0.86
SEMA6A-204ENST00000503402 HSPA6P17066 643 aa9.66□□□□□ -0.86
SEMA6A-204ENST00000503402 MPRIPQ6WCQ1 1025 aa9.66□□□□□ -0.86
SEMA6A-204ENST00000503402 KIF20BQ96Q89 1820 aa9.66□□□□□ -0.86
SEMA6A-204ENST00000503402 RTL1A6NKG5 1358 aa9.65□□□□□ -0.86
SEMA6A-204ENST00000503402 PLCB2Q00722 1185 aa9.65□□□□□ -0.86
SEMA6A-204ENST00000503402 RAPGEF4Q8WZA2 1011 aa9.65□□□□□ -0.86
SEMA6A-204ENST00000503402 AK7Q96M32 723 aa9.65□□□□□ -0.86
SEMA6A-204ENST00000503402 CD2APQ9Y5K6 639 aa9.65□□□□□ -0.86
SEMA6A-204ENST00000503402 PKD1L3Q7Z443 1732 aa9.65□□□□□ -0.87
SEMA6A-204ENST00000503402 SMG6Q86US8 1419 aaKnown RBP9.65□□□□□ -0.87
SEMA6A-204ENST00000503402 PCDH11XQ9BZA7 1347 aa9.64□□□□□ -0.87
SEMA6A-204ENST00000503402 PCDH11YQ9BZA8 1340 aa9.64□□□□□ -0.87
SEMA6A-204ENST00000503402 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.64□□□□□ -0.87
SEMA6A-204ENST00000503402 CYP27B1O15528 508 aa9.64□□□□□ -0.87
SEMA6A-204ENST00000503402 TATP17735 454 aaPredicted RBP9.64□□□□□ -0.87
SEMA6A-204ENST00000503402 PBX2P40425 430 aa9.64□□□□□ -0.87
SEMA6A-204ENST00000503402 LSM11P83369 360 aaKnown RBP eCLIP9.64□□□□□ -0.87
SEMA6A-204ENST00000503402 HSP90AB2PQ58FF8 381 aa9.64□□□□□ -0.87
SEMA6A-204ENST00000503402 TESK2Q96S53 571 aa9.64□□□□□ -0.87
SEMA6A-204ENST00000503402 N4BP2Q86UW6 1770 aaPredicted RBP9.63□□□□□ -0.87
SEMA6A-204ENST00000503402 KIAA1551Q9HCM1 1747 aa9.63□□□□□ -0.87
SEMA6A-204ENST00000503402 ST20-MTHFSA0A0A6YYL1 179 aa9.63□□□□□ -0.87
SEMA6A-204ENST00000503402 ANKRD13DQ6ZTN6 518 aa9.63□□□□□ -0.87
SEMA6A-204ENST00000503402 LINC00116Q8NCU8 138 aa9.63□□□□□ -0.87
SEMA6A-204ENST00000503402 MAP2P11137 1827 aaKnown RBP9.63□□□□□ -0.87
SEMA6A-204ENST00000503402 TONSLQ96HA7 1378 aa9.63□□□□□ -0.87
SEMA6A-204ENST00000503402 PXDNLA1KZ92 1463 aa9.62□□□□□ -0.87
SEMA6A-204ENST00000503402 SPRYD3Q8NCJ5 442 aa9.62□□□□□ -0.87
SEMA6A-204ENST00000503402 EMILIN3Q9NT22 766 aa9.62□□□□□ -0.87
SEMA6A-204ENST00000503402 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.62□□□□□ -0.87
SEMA6A-204ENST00000503402 CICQ96RK0 1608 aaPredicted RBP9.62□□□□□ -0.87
SEMA6A-204ENST00000503402 FYB1O15117 783 aa9.61□□□□□ -0.87
SEMA6A-204ENST00000503402 GNPATO15228 680 aa9.61□□□□□ -0.87
SEMA6A-204ENST00000503402 ITPK1Q13572 414 aa9.61□□□□□ -0.87
SEMA6A-204ENST00000503402 PIGBQ92521 554 aa9.61□□□□□ -0.87
SEMA6A-204ENST00000503402 EMILIN1Q9Y6C2 1016 aa9.61□□□□□ -0.87
SEMA6A-204ENST00000503402 INSRP06213 1382 aa9.61□□□□□ -0.87
SEMA6A-204ENST00000503402 FLT4P35916 1363 aa9.61□□□□□ -0.87
SEMA6A-204ENST00000503402 HTRA3P83110 453 aa9.6□□□□□ -0.87
SEMA6A-204ENST00000503402 PPP4R3BQ5MIZ7 849 aa9.6□□□□□ -0.87
SEMA6A-204ENST00000503402 FLAD1Q8NFF5 587 aa9.6□□□□□ -0.87
SEMA6A-204ENST00000503402 CGNL1Q0VF96 1302 aa9.59□□□□□ -0.87
SEMA6A-204ENST00000503402 LOC102724428A0A0B4J2F2 783 aa9.59□□□□□ -0.87
SEMA6A-204ENST00000503402 PPM1GO15355 546 aaPredicted RBP9.59□□□□□ -0.87
SEMA6A-204ENST00000503402 MMP10P09238 476 aa9.59□□□□□ -0.87
SEMA6A-204ENST00000503402 SIK1P57059 783 aa9.59□□□□□ -0.87
SEMA6A-204ENST00000503402 NMRK2Q9NPI5 230 aa9.59□□□□□ -0.87
SEMA6A-204ENST00000503402 ASAP1Q9ULH1 1129 aa9.59□□□□□ -0.87
SEMA6A-204ENST00000503402 NSD3Q9BZ95 1437 aa9.58□□□□□ -0.88
SEMA6A-204ENST00000503402 ARHGAP33O14559 1287 aa9.58□□□□□ -0.88
SEMA6A-204ENST00000503402 EVI5O60447 810 aa9.58□□□□□ -0.88
SEMA6A-204ENST00000503402 PAXIP1Q6ZW49 1069 aaPredicted RBP9.58□□□□□ -0.88
SEMA6A-204ENST00000503402 SMARCC1Q92922 1105 aaPredicted RBP9.58□□□□□ -0.88
SEMA6A-204ENST00000503402 CFAP44Q96MT7 982 aa9.58□□□□□ -0.88
SEMA6A-204ENST00000503402 PUS7Q96PZ0 661 aaKnown RBP9.58□□□□□ -0.88
SEMA6A-204ENST00000503402 BCS1LQ9Y276 419 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms