RNA–Protein interactions for RNA: ENST00000502955.5

DDR1-247, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 574 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-247ENST00000502955 RNF181Q9P0P0 153 aa18.71■□□□□ 0.59
DDR1-247ENST00000502955 AFDNP55196 1824 aaKnown RBP18.71■□□□□ 0.59
DDR1-247ENST00000502955 PCNTO95613 3336 aa18.71■□□□□ 0.59
DDR1-247ENST00000502955 ZC3H4Q9UPT8 1303 aaKnown RBP18.71■□□□□ 0.59
DDR1-247ENST00000502955 AMER1Q5JTC6 1135 aaPredicted RBP18.7■□□□□ 0.58
DDR1-247ENST00000502955 LGR6Q9HBX8 967 aa18.7■□□□□ 0.58
DDR1-247ENST00000502955 NARFQ9UHQ1 456 aa18.7■□□□□ 0.58
DDR1-247ENST00000502955 DLEC1Q9Y238 1755 aa18.7■□□□□ 0.58
DDR1-247ENST00000502955 COL15A1P39059 1388 aa18.69■□□□□ 0.58
DDR1-247ENST00000502955 RNMTO43148 476 aaKnown RBP18.69■□□□□ 0.58
DDR1-247ENST00000502955 VSIG10Q8N0Z9 540 aa18.69■□□□□ 0.58
DDR1-247ENST00000502955 UBR2Q8IWV8 1755 aa18.68■□□□□ 0.58
DDR1-247ENST00000502955 NFIXQ14938 502 aa18.67■□□□□ 0.58
DDR1-247ENST00000502955 JMYQ8N9B5 988 aa18.67■□□□□ 0.58
DDR1-247ENST00000502955 KLRG1Q96E93 195 aa18.67■□□□□ 0.58
DDR1-247ENST00000502955 PCGF6Q9BYE7 350 aa18.67■□□□□ 0.58
DDR1-247ENST00000502955 SLC39A6Q13433 755 aa18.66■□□□□ 0.58
DDR1-247ENST00000502955 RRAGCQ9HB90 399 aa18.66■□□□□ 0.58
DDR1-247ENST00000502955 ZBTB1Q9Y2K1 713 aa18.66■□□□□ 0.58
DDR1-247ENST00000502955 BCL2L12Q9HB09 334 aa18.65■□□□□ 0.58
DDR1-247ENST00000502955 SERPINB2P05120 415 aa18.63■□□□□ 0.57
DDR1-247ENST00000502955 HMOX1P09601 288 aa18.63■□□□□ 0.57
DDR1-247ENST00000502955 LMNB1P20700 586 aa18.63■□□□□ 0.57
DDR1-247ENST00000502955 MTHFSDQ2M296 383 aaKnown RBP18.63■□□□□ 0.57
DDR1-247ENST00000502955 SMC1BQ8NDV3 1235 aa18.63■□□□□ 0.57
DDR1-247ENST00000502955 RASSF7Q02833 373 aa18.62■□□□□ 0.57
DDR1-247ENST00000502955 TTLL6Q8N841 843 aa18.62■□□□□ 0.57
DDR1-247ENST00000502955 GLTPD2A6NH11 291 aa18.61■□□□□ 0.57
DDR1-247ENST00000502955 PER1O15534 1290 aaPredicted RBP18.61■□□□□ 0.57
DDR1-247ENST00000502955 PRELPP51888 382 aa18.61■□□□□ 0.57
DDR1-247ENST00000502955 HTRA3P83110 453 aa18.61■□□□□ 0.57
DDR1-247ENST00000502955 TIAM2Q8IVF5 1701 aa18.6■□□□□ 0.57
DDR1-247ENST00000502955 KIF7Q2M1P5 1343 aa18.6■□□□□ 0.57
DDR1-247ENST00000502955 DIAPH1O60610 1272 aaKnown RBP18.6■□□□□ 0.57
DDR1-247ENST00000502955 EIF5P55010 431 aaKnown RBP18.6■□□□□ 0.57
DDR1-247ENST00000502955 A0A087WZG4 1122 aa18.59■□□□□ 0.57
DDR1-247ENST00000502955 H0YIN7 160 aa18.59■□□□□ 0.57
DDR1-247ENST00000502955 STARD3NLO95772 234 aa18.59■□□□□ 0.57
DDR1-247ENST00000502955 CCDC88AQ3V6T2 1871 aa18.58■□□□□ 0.57
DDR1-247ENST00000502955 CARMIL3Q8ND23 1372 aa18.58■□□□□ 0.57
DDR1-247ENST00000502955 SCN7AQ01118 1682 aa18.58■□□□□ 0.57
DDR1-247ENST00000502955 VEGFAP15692 232 aaPredicted RBP18.58■□□□□ 0.56
DDR1-247ENST00000502955 C2CD5Q86YS7 1000 aa18.58■□□□□ 0.56
DDR1-247ENST00000502955 TTC5Q8N0Z6 440 aa18.58■□□□□ 0.56
DDR1-247ENST00000502955 PDZRN3Q9UPQ7 1066 aa18.58■□□□□ 0.56
DDR1-247ENST00000502955 ANKRD31Q8N7Z5 1873 aa18.58■□□□□ 0.56
DDR1-247ENST00000502955 SIPA1L3O60292 1781 aaPredicted RBP18.58■□□□□ 0.56
DDR1-247ENST00000502955 NFKBIEO00221 500 aa18.57■□□□□ 0.56
DDR1-247ENST00000502955 CANXP27824 592 aaKnown RBP18.57■□□□□ 0.56
DDR1-247ENST00000502955 TEX13AQ9BXU3 409 aaPredicted RBP18.57■□□□□ 0.56
DDR1-247ENST00000502955 COL3A1P02461 1466 aaPredicted RBP18.57■□□□□ 0.56
DDR1-247ENST00000502955 ZNF790Q6PG37 636 aa18.56■□□□□ 0.56
DDR1-247ENST00000502955 HEG1Q9ULI3 1381 aa18.55■□□□□ 0.56
DDR1-247ENST00000502955 DICER1Q9UPY3 1922 aaKnown RBP18.55■□□□□ 0.56
DDR1-247ENST00000502955 FER1L6Q2WGJ9 1857 aa18.55■□□□□ 0.56
DDR1-247ENST00000502955 ZNF496Q96IT1 587 aaPredicted RBP18.55■□□□□ 0.56
DDR1-247ENST00000502955 BRIP1Q9BX63 1249 aa18.55■□□□□ 0.56
DDR1-247ENST00000502955 NPC1L1Q9UHC9 1359 aa18.55■□□□□ 0.56
DDR1-247ENST00000502955 PDE6BP35913 854 aa18.54■□□□□ 0.56
DDR1-247ENST00000502955 COL13A1Q5TAT6 717 aaPredicted RBP18.54■□□□□ 0.56
DDR1-247ENST00000502955 TBC1D9BQ66K14 1250 aa18.54■□□□□ 0.56
DDR1-247ENST00000502955 COL11A2P13942 1736 aaPredicted RBP18.54■□□□□ 0.56
DDR1-247ENST00000502955 GNAT3A8MTJ3 354 aa18.53■□□□□ 0.56
DDR1-247ENST00000502955 IL6STP40189 918 aaPredicted RBP18.53■□□□□ 0.56
DDR1-247ENST00000502955 TEFQ10587 303 aa18.53■□□□□ 0.56
DDR1-247ENST00000502955 BICDL1Q6ZP65 573 aa18.53■□□□□ 0.56
DDR1-247ENST00000502955 IL17REQ8NFR9 667 aa18.53■□□□□ 0.56
DDR1-247ENST00000502955 GAS2L2Q8NHY3 880 aa18.53■□□□□ 0.56
DDR1-247ENST00000502955 CEMIPQ8WUJ3 1361 aa18.53■□□□□ 0.56
DDR1-247ENST00000502955 LTBP3Q9NS15 1303 aa18.52■□□□□ 0.56
DDR1-247ENST00000502955 POTECB2RU33 542 aa18.52■□□□□ 0.56
DDR1-247ENST00000502955 CC2D1BQ5T0F9 858 aaKnown RBP18.52■□□□□ 0.56
DDR1-247ENST00000502955 PRR5LQ6MZQ0 368 aa18.52■□□□□ 0.56
DDR1-247ENST00000502955 DPY19L2Q6NUT2 758 aa18.52■□□□□ 0.56
DDR1-247ENST00000502955 CCER1Q8TC90 406 aaPredicted RBP18.5■□□□□ 0.55
DDR1-247ENST00000502955 ZNF622Q969S3 477 aaKnown RBP eCLIP18.5■□□□□ 0.55
DDR1-247ENST00000502955 FMNL2Q96PY5 1086 aa18.5■□□□□ 0.55
DDR1-247ENST00000502955 TBC1D2BQ9UPU7 963 aa18.5■□□□□ 0.55
DDR1-247ENST00000502955 BCORQ6W2J9 1755 aa18.5■□□□□ 0.55
DDR1-247ENST00000502955 ARFGEF2Q9Y6D5 1785 aa18.5■□□□□ 0.55
DDR1-247ENST00000502955 C21orf2O43822 256 aa18.49■□□□□ 0.55
DDR1-247ENST00000502955 CAMTA2O94983 1202 aa18.48■□□□□ 0.55
DDR1-247ENST00000502955 ERFEQ4G0M1 354 aa18.48■□□□□ 0.55
DDR1-247ENST00000502955 SETDB2Q96T68 719 aa18.48■□□□□ 0.55
DDR1-247ENST00000502955 U2SURPO15042 1029 aaKnown RBP18.47■□□□□ 0.55
DDR1-247ENST00000502955 STYK1Q6J9G0 422 aa18.47■□□□□ 0.55
DDR1-247ENST00000502955 CNBD1Q8NA66 436 aa18.47■□□□□ 0.55
DDR1-247ENST00000502955 CNKSR1Q969H4 720 aa18.47■□□□□ 0.55
DDR1-247ENST00000502955 TAOK3Q9H2K8 898 aa18.47■□□□□ 0.55
DDR1-247ENST00000502955 SLX4Q8IY92 1834 aa18.46■□□□□ 0.55
DDR1-247ENST00000502955 A1BGP04217 495 aa18.46■□□□□ 0.55
DDR1-247ENST00000502955 SRGNP10124 158 aa18.46■□□□□ 0.55
DDR1-247ENST00000502955 SOGA3Q5TF21 947 aa18.46■□□□□ 0.55
DDR1-247ENST00000502955 NPM2Q86SE8 214 aaKnown RBP18.46■□□□□ 0.55
DDR1-247ENST00000502955 ZNF330Q9Y3S2 320 aaPredicted RBP18.46■□□□□ 0.55
DDR1-247ENST00000502955 ST5P78524 1137 aa18.45■□□□□ 0.54
DDR1-247ENST00000502955 CLEC4GQ6UXB4 293 aa18.45■□□□□ 0.54
DDR1-247ENST00000502955 BTBD11A6QL63 1104 aa18.44■□□□□ 0.54
DDR1-247ENST00000502955 PRPF40BQ6NWY9 871 aaKnown RBP18.44■□□□□ 0.54
DDR1-247ENST00000502955 TNS4Q8IZW8 715 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 276.6 ms