RNA–Protein interactions for RNA: ENST00000502555.5

SGCA-203, Transcript of sarcoglycan alpha, humanhuman

TSL 2

Gene SGCA, Length 1,349 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-203ENST00000502555 TMEM57Q8N5G2 664 aa17.15■□□□□ 0.34
SGCA-203ENST00000502555 SYTL4Q96C24 671 aaPredicted RBP17.15■□□□□ 0.34
SGCA-203ENST00000502555 CHMP4BQ9H444 224 aaKnown RBP17.15■□□□□ 0.34
SGCA-203ENST00000502555 DDX21Q9NR30 783 aaKnown RBP eCLIP17.15■□□□□ 0.34
SGCA-203ENST00000502555 HYPKQ9NX55 129 aa17.15■□□□□ 0.34
SGCA-203ENST00000502555 ASAP1Q9ULH1 1129 aa17.15■□□□□ 0.34
SGCA-203ENST00000502555 C5P01031 1676 aa17.15■□□□□ 0.34
SGCA-203ENST00000502555 LAMB4A4D0S4 1761 aa17.14■□□□□ 0.33
SGCA-203ENST00000502555 CACNA1FO60840 1977 aa17.14■□□□□ 0.33
SGCA-203ENST00000502555 G2E3Q7L622 706 aa17.14■□□□□ 0.33
SGCA-203ENST00000502555 ITPRIPQ8IWB1 547 aa17.14■□□□□ 0.33
SGCA-203ENST00000502555 TEX13AQ9BXU3 409 aaPredicted RBP17.14■□□□□ 0.33
SGCA-203ENST00000502555 PTCD1O75127 700 aaKnown RBP17.13■□□□□ 0.33
SGCA-203ENST00000502555 RBM6P78332 1123 aaKnown RBP17.13■□□□□ 0.33
SGCA-203ENST00000502555 CCDC136Q96JN2 1154 aa17.13■□□□□ 0.33
SGCA-203ENST00000502555 PXDNLA1KZ92 1463 aa17.13■□□□□ 0.33
SGCA-203ENST00000502555 FKBP5Q13451 457 aaPredicted RBP17.12■□□□□ 0.33
SGCA-203ENST00000502555 INTS3Q68E01 1043 aaKnown RBP17.12■□□□□ 0.33
SGCA-203ENST00000502555 ACSBG1Q96GR2 724 aa17.12■□□□□ 0.33
SGCA-203ENST00000502555 USP16Q9Y5T5 823 aa17.12■□□□□ 0.33
SGCA-203ENST00000502555 SMARCC1Q92922 1105 aaPredicted RBP17.11■□□□□ 0.33
SGCA-203ENST00000502555 CCT4P50991 539 aaKnown RBP17.1■□□□□ 0.33
SGCA-203ENST00000502555 PDIA6Q15084 440 aa17.1■□□□□ 0.33
SGCA-203ENST00000502555 PHAXQ9H814 394 aaKnown RBP17.1■□□□□ 0.33
SGCA-203ENST00000502555 PROSER3Q2NL68 480 aa17.09■□□□□ 0.33
SGCA-203ENST00000502555 B4GALNT3Q6L9W6 998 aa17.09■□□□□ 0.33
SGCA-203ENST00000502555 NHSQ6T4R5 1651 aa17.08■□□□□ 0.32
SGCA-203ENST00000502555 STARD3NLO95772 234 aa17.08■□□□□ 0.32
SGCA-203ENST00000502555 DDX58O95786 925 aaKnown RBP17.08■□□□□ 0.32
SGCA-203ENST00000502555 RBM42Q9BTD8 480 aaKnown RBP17.08■□□□□ 0.32
SGCA-203ENST00000502555 PALLDQ8WX93 1383 aa17.08■□□□□ 0.32
SGCA-203ENST00000502555 CICQ96RK0 1608 aaPredicted RBP17.07■□□□□ 0.32
SGCA-203ENST00000502555 KCNQ2O43526 872 aa17.07■□□□□ 0.32
SGCA-203ENST00000502555 ANXA1P04083 346 aa17.07■□□□□ 0.32
SGCA-203ENST00000502555 LRP10Q7Z4F1 713 aa17.07■□□□□ 0.32
SGCA-203ENST00000502555 F6X3S4 739 aa17.06■□□□□ 0.32
SGCA-203ENST00000502555 DNAJC10Q8IXB1 793 aa17.06■□□□□ 0.32
SGCA-203ENST00000502555 ZBTB40Q9NUA8 1239 aa17.06■□□□□ 0.32
SGCA-203ENST00000502555 ATP10DQ9P241 1426 aa17.06■□□□□ 0.32
SGCA-203ENST00000502555 ADCY9O60503 1353 aa17.05■□□□□ 0.32
SGCA-203ENST00000502555 ZBTB7BO15156 539 aaPredicted RBP17.05■□□□□ 0.32
SGCA-203ENST00000502555 SLC4A10Q6U841 1118 aa17.05■□□□□ 0.32
SGCA-203ENST00000502555 KSR2Q6VAB6 950 aa17.05■□□□□ 0.32
SGCA-203ENST00000502555 KRT27Q7Z3Y8 459 aa17.05■□□□□ 0.32
SGCA-203ENST00000502555 DNAAF4Q8WXU2 420 aa17.05■□□□□ 0.32
SGCA-203ENST00000502555 LOC102724428A0A0B4J2F2 783 aa17.04■□□□□ 0.32
SGCA-203ENST00000502555 PI4KAP2A4QPH2 592 aa17.04■□□□□ 0.32
SGCA-203ENST00000502555 NBPF26B4DH59 902 aa17.04■□□□□ 0.32
SGCA-203ENST00000502555 MYL6BP14649 208 aa17.04■□□□□ 0.32
SGCA-203ENST00000502555 RXRBP28702 533 aa17.04■□□□□ 0.32
SGCA-203ENST00000502555 SIK1P57059 783 aa17.04■□□□□ 0.32
SGCA-203ENST00000502555 NBPF14Q5TI25 921 aa17.04■□□□□ 0.32
SGCA-203ENST00000502555 NBPF10Q6P3W6 841 aaKnown RBP17.04■□□□□ 0.32
SGCA-203ENST00000502555 FAM196AQ6ZSG2 479 aa17.04■□□□□ 0.32
SGCA-203ENST00000502555 NBPF15Q8N660 670 aa17.04■□□□□ 0.32
SGCA-203ENST00000502555 PI4KAP1Q8N8J0 262 aa17.04■□□□□ 0.32
SGCA-203ENST00000502555 XAGE3Q8WTP9 111 aa17.04■□□□□ 0.32
SGCA-203ENST00000502555 SLC4A9Q96Q91 983 aa17.04■□□□□ 0.32
SGCA-203ENST00000502555 N4BP2Q86UW6 1770 aaPredicted RBP17.04■□□□□ 0.32
SGCA-203ENST00000502555 IBTKQ9P2D0 1353 aaPredicted RBP17.03■□□□□ 0.32
SGCA-203ENST00000502555 A1BGP04217 495 aa17.03■□□□□ 0.32
SGCA-203ENST00000502555 CYP19A1P11511 503 aaPredicted RBP17.03■□□□□ 0.32
SGCA-203ENST00000502555 ZNF831Q5JPB2 1677 aa17.03■□□□□ 0.32
SGCA-203ENST00000502555 TJP1Q07157 1748 aa17.03■□□□□ 0.32
SGCA-203ENST00000502555 COPS6Q7L5N1 327 aa17.02■□□□□ 0.32
SGCA-203ENST00000502555 FAM182BQ5T319 152 aa17.01■□□□□ 0.31
SGCA-203ENST00000502555 CENPQQ7L2Z9 268 aaPredicted RBP17.01■□□□□ 0.31
SGCA-203ENST00000502555 SRCIN1Q9C0H9 1055 aa17.01■□□□□ 0.31
SGCA-203ENST00000502555 BCL11BQ9C0K0 894 aaPredicted RBP17.01■□□□□ 0.31
SGCA-203ENST00000502555 MAP3K2Q9Y2U5 619 aa17.01■□□□□ 0.31
SGCA-203ENST00000502555 ATP6V1AP38606 617 aa17■□□□□ 0.31
SGCA-203ENST00000502555 AIMP1Q12904 312 aaKnown RBP17■□□□□ 0.31
SGCA-203ENST00000502555 BEND3Q5T5X7 828 aa17■□□□□ 0.31
SGCA-203ENST00000502555 RGS17Q9UGC6 210 aaPredicted RBP17■□□□□ 0.31
SGCA-203ENST00000502555 PCDHB15Q9Y5E8 787 aa17■□□□□ 0.31
SGCA-203ENST00000502555 KDM2BQ8NHM5 1336 aa17■□□□□ 0.31
SGCA-203ENST00000502555 ALDH1L1O75891 902 aa16.99■□□□□ 0.31
SGCA-203ENST00000502555 GNAI3P08754 354 aa16.99■□□□□ 0.31
SGCA-203ENST00000502555 PIP4K2AP48426 406 aaPredicted RBP16.99■□□□□ 0.31
SGCA-203ENST00000502555 ANKRD13DQ6ZTN6 518 aa16.99■□□□□ 0.31
SGCA-203ENST00000502555 RIC3Q7Z5B4 369 aa16.99■□□□□ 0.31
SGCA-203ENST00000502555 LINS1Q8NG48 757 aa16.99■□□□□ 0.31
SGCA-203ENST00000502555 PLBD2Q8NHP8 589 aa16.99■□□□□ 0.31
SGCA-203ENST00000502555 KAT6BQ8WYB5 2073 aa16.99■□□□□ 0.31
SGCA-203ENST00000502555 BTAF1O14981 1849 aa16.99■□□□□ 0.31
SGCA-203ENST00000502555 NEXNQ0ZGT2 675 aa16.98■□□□□ 0.31
SGCA-203ENST00000502555 MEIS3Q99687 375 aa16.98■□□□□ 0.31
SGCA-203ENST00000502555 BRWD3Q6RI45 1802 aa16.98■□□□□ 0.31
SGCA-203ENST00000502555 IL6STP40189 918 aaPredicted RBP16.97■□□□□ 0.31
SGCA-203ENST00000502555 HDAC1Q13547 482 aaPredicted RBP16.97■□□□□ 0.31
SGCA-203ENST00000502555 ITPK1Q13572 414 aa16.97■□□□□ 0.31
SGCA-203ENST00000502555 PTF1AQ7RTS3 328 aa16.97■□□□□ 0.31
SGCA-203ENST00000502555 METTL22Q9BUU2 404 aaPredicted RBP16.97■□□□□ 0.31
SGCA-203ENST00000502555 RWDD1Q9H446 243 aaPredicted RBP16.97■□□□□ 0.31
SGCA-203ENST00000502555 CCDC87Q9NVE4 849 aa16.97■□□□□ 0.31
SGCA-203ENST00000502555 RREB1Q92766 1687 aa16.97■□□□□ 0.31
SGCA-203ENST00000502555 SBF2Q86WG5 1849 aa16.97■□□□□ 0.31
SGCA-203ENST00000502555 POTEAQ6S8J7 498 aa16.96■□□□□ 0.31
SGCA-203ENST00000502555 ZBTB1Q9Y2K1 713 aa16.96■□□□□ 0.31
SGCA-203ENST00000502555 CRKLP46109 303 aaKnown RBP16.96■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms