RNA–Protein interactions for RNA: ENST00000502422.5

MATR3-202, Transcript of matrin 3, humanhuman

TSL 1 (best)

Gene MATR3, Length 2,250 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-202ENST00000502422 IGSF1Q8N6C5 1336 aa6.12□□□□□ -1.43
MATR3-202ENST00000502422 LTN1O94822 1766 aa6.12□□□□□ -1.43
MATR3-202ENST00000502422 ZCRB1Q8TBF4 217 aaKnown RBP6.11□□□□□ -1.43
MATR3-202ENST00000502422 TMC1Q8TDI8 760 aa6.11□□□□□ -1.43
MATR3-202ENST00000502422 NME9Q86XW9 330 aa6.11□□□□□ -1.43
MATR3-202ENST00000502422 C16orf71Q8IYS4 520 aaPredicted RBP6.11□□□□□ -1.43
MATR3-202ENST00000502422 LY75O60449 1722 aa6.11□□□□□ -1.43
MATR3-202ENST00000502422 HDGFL2Q7Z4V5 671 aaPredicted RBP6.1□□□□□ -1.43
MATR3-202ENST00000502422 LARP6Q9BRS8 491 aaKnown RBP6.1□□□□□ -1.43
MATR3-202ENST00000502422 CRISPLD2Q9H0B8 497 aa6.1□□□□□ -1.43
MATR3-202ENST00000502422 COL13A1Q5TAT6 717 aaPredicted RBP6.1□□□□□ -1.43
MATR3-202ENST00000502422 DOT1LQ8TEK3 1739 aa6.1□□□□□ -1.43
MATR3-202ENST00000502422 IP6K1Q92551 441 aa6.1□□□□□ -1.43
MATR3-202ENST00000502422 AK7Q96M32 723 aa6.1□□□□□ -1.43
MATR3-202ENST00000502422 PCNTO95613 3336 aa6.1□□□□□ -1.43
MATR3-202ENST00000502422 USP31Q70CQ4 1352 aa6.1□□□□□ -1.43
MATR3-202ENST00000502422 PHF14O94880 888 aa6.09□□□□□ -1.43
MATR3-202ENST00000502422 AMPHP49418 695 aa6.09□□□□□ -1.43
MATR3-202ENST00000502422 PDCD7Q8N8D1 485 aaKnown RBP6.09□□□□□ -1.43
MATR3-202ENST00000502422 PDE4AP27815 886 aa6.09□□□□□ -1.44
MATR3-202ENST00000502422 MFSD10Q14728 455 aa6.09□□□□□ -1.44
MATR3-202ENST00000502422 E2F4Q16254 413 aa6.09□□□□□ -1.44
MATR3-202ENST00000502422 MPRIPQ6WCQ1 1025 aa6.09□□□□□ -1.44
MATR3-202ENST00000502422 RAPGEF4Q8WZA2 1011 aa6.09□□□□□ -1.44
MATR3-202ENST00000502422 PXDNLA1KZ92 1463 aa6.08□□□□□ -1.44
MATR3-202ENST00000502422 IRX5P78411 483 aaPredicted RBP6.08□□□□□ -1.44
MATR3-202ENST00000502422 TERF2IPQ9NYB0 399 aa6.08□□□□□ -1.44
MATR3-202ENST00000502422 BCS1LQ9Y276 419 aa6.08□□□□□ -1.44
MATR3-202ENST00000502422 ROCK2O75116 1388 aaKnown RBP6.08□□□□□ -1.44
MATR3-202ENST00000502422 PLEKHG2Q9H7P9 1386 aa6.08□□□□□ -1.44
MATR3-202ENST00000502422 ARHGAP27Q6ZUM4 889 aa6.08□□□□□ -1.44
MATR3-202ENST00000502422 IL27Q8NEV9 243 aa6.08□□□□□ -1.44
MATR3-202ENST00000502422 NSD2O96028 1365 aa6.08□□□□□ -1.44
MATR3-202ENST00000502422 C5P01031 1676 aa6.07□□□□□ -1.44
MATR3-202ENST00000502422 FAM208AQ9UK61 1670 aaKnown RBP6.07□□□□□ -1.44
MATR3-202ENST00000502422 MON2Q7Z3U7 1717 aa6.07□□□□□ -1.44
MATR3-202ENST00000502422 PALLDQ8WX93 1383 aa6.07□□□□□ -1.44
MATR3-202ENST00000502422 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.07□□□□□ -1.44
MATR3-202ENST00000502422 ST18O60284 1047 aa6.07□□□□□ -1.44
MATR3-202ENST00000502422 HTRA3P83110 453 aa6.07□□□□□ -1.44
MATR3-202ENST00000502422 SMARCC1Q92922 1105 aaPredicted RBP6.07□□□□□ -1.44
MATR3-202ENST00000502422 COG3Q96JB2 828 aa6.07□□□□□ -1.44
MATR3-202ENST00000502422 NMRK2Q9NPI5 230 aa6.07□□□□□ -1.44
MATR3-202ENST00000502422 NSD3Q9BZ95 1437 aa6.07□□□□□ -1.44
MATR3-202ENST00000502422 CGNL1Q0VF96 1302 aa6.07□□□□□ -1.44
MATR3-202ENST00000502422 SBNO2Q9Y2G9 1366 aa6.06□□□□□ -1.44
MATR3-202ENST00000502422 TATP17735 454 aaPredicted RBP6.06□□□□□ -1.44
MATR3-202ENST00000502422 HOXC9P31274 260 aa6.06□□□□□ -1.44
MATR3-202ENST00000502422 SLC12A5Q9H2X9 1139 aa6.06□□□□□ -1.44
MATR3-202ENST00000502422 SSFA2P28290 1259 aa6.06□□□□□ -1.44
MATR3-202ENST00000502422 TGFB2P61812 414 aa6.06□□□□□ -1.44
MATR3-202ENST00000502422 ARHGEF1Q92888 912 aaKnown RBP6.06□□□□□ -1.44
MATR3-202ENST00000502422 L3MBTL2Q969R5 705 aa6.06□□□□□ -1.44
MATR3-202ENST00000502422 GCC1Q96CN9 775 aa6.06□□□□□ -1.44
MATR3-202ENST00000502422 EDC4Q6P2E9 1401 aaKnown RBP6.06□□□□□ -1.44
MATR3-202ENST00000502422 TAF1LQ8IZX4 1826 aa6.05□□□□□ -1.44
MATR3-202ENST00000502422 FCHSD2O94868 740 aa6.05□□□□□ -1.44
MATR3-202ENST00000502422 SMIM5Q71RC9 77 aa6.05□□□□□ -1.44
MATR3-202ENST00000502422 MICALL2Q8IY33 904 aa6.05□□□□□ -1.44
MATR3-202ENST00000502422 USHBP1Q8N6Y0 703 aa6.05□□□□□ -1.44
MATR3-202ENST00000502422 DDX27Q96GQ7 796 aaKnown RBP6.05□□□□□ -1.44
MATR3-202ENST00000502422 MAP3K19Q56UN5 1328 aa6.05□□□□□ -1.44
MATR3-202ENST00000502422 KDM2BQ8NHM5 1336 aa6.05□□□□□ -1.44
MATR3-202ENST00000502422 PCDH11XQ9BZA7 1347 aa6.05□□□□□ -1.44
MATR3-202ENST00000502422 PCDH11YQ9BZA8 1340 aa6.05□□□□□ -1.44
MATR3-202ENST00000502422 USP54Q70EL1 1684 aa6.05□□□□□ -1.44
MATR3-202ENST00000502422 MEGF6O75095 1541 aa6.05□□□□□ -1.44
MATR3-202ENST00000502422 C4BP0C0L5 1744 aa6.05□□□□□ -1.44
MATR3-202ENST00000502422 SMG6Q86US8 1419 aaKnown RBP6.05□□□□□ -1.44
MATR3-202ENST00000502422 A0A0G2JLW4 131 aa6.05□□□□□ -1.44
MATR3-202ENST00000502422 SNPHO15079 494 aa6.05□□□□□ -1.44
MATR3-202ENST00000502422 MMP10P09238 476 aa6.05□□□□□ -1.44
MATR3-202ENST00000502422 MLLT1Q03111 559 aaPredicted RBP6.05□□□□□ -1.44
MATR3-202ENST00000502422 NBPF6Q5VWK0 638 aa6.05□□□□□ -1.44
MATR3-202ENST00000502422 NBPF4Q96M43 638 aa6.05□□□□□ -1.44
MATR3-202ENST00000502422 OCEL1Q9H607 264 aa6.05□□□□□ -1.44
MATR3-202ENST00000502422 RGPD2P0DJD1 1756 aa6.05□□□□□ -1.44
MATR3-202ENST00000502422 ZC3H4Q9UPT8 1303 aaKnown RBP6.05□□□□□ -1.44
MATR3-202ENST00000502422 GNPATO15228 680 aa6.04□□□□□ -1.44
MATR3-202ENST00000502422 NEFLP07196 543 aa6.04□□□□□ -1.44
MATR3-202ENST00000502422 FBLN1P23142 703 aa6.04□□□□□ -1.44
MATR3-202ENST00000502422 IER5LQ5T953 404 aa6.04□□□□□ -1.44
MATR3-202ENST00000502422 LOC102724428A0A0B4J2F2 783 aa6.04□□□□□ -1.44
MATR3-202ENST00000502422 ATP6V1AP38606 617 aa6.04□□□□□ -1.44
MATR3-202ENST00000502422 SIK1P57059 783 aa6.04□□□□□ -1.44
MATR3-202ENST00000502422 CAMK2BQ13554 666 aa6.04□□□□□ -1.44
MATR3-202ENST00000502422 C9orf131Q5VYM1 1079 aa6.04□□□□□ -1.44
MATR3-202ENST00000502422 AMIGO3Q86WK7 504 aa6.04□□□□□ -1.44
MATR3-202ENST00000502422 NLGN1Q8N2Q7 840 aa6.04□□□□□ -1.44
MATR3-202ENST00000502422 RRAGCQ9HB90 399 aa6.04□□□□□ -1.44
MATR3-202ENST00000502422 GPHNQ9NQX3 736 aaPredicted RBP6.04□□□□□ -1.44
MATR3-202ENST00000502422 CCDC87Q9NVE4 849 aa6.04□□□□□ -1.44
MATR3-202ENST00000502422 A0A1W2PP64 1363 aa6.03□□□□□ -1.44
MATR3-202ENST00000502422 CD163L1Q9NR16 1453 aa6.03□□□□□ -1.44
MATR3-202ENST00000502422 N4BP2Q86UW6 1770 aaPredicted RBP6.03□□□□□ -1.44
MATR3-202ENST00000502422 TMF1P82094 1093 aa6.03□□□□□ -1.44
MATR3-202ENST00000502422 RRS1Q15050 365 aaKnown RBP6.03□□□□□ -1.44
MATR3-202ENST00000502422 TRAPPC3LQ5T215 181 aa6.03□□□□□ -1.44
MATR3-202ENST00000502422 SMC1BQ8NDV3 1235 aa6.03□□□□□ -1.44
MATR3-202ENST00000502422 CARD11Q9BXL7 1154 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms