RNA–Protein interactions for RNA: ENST00000502066.6

CRNDE-202, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 1 (best)

Gene CRNDE, Length 659 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-202ENST00000502066 BCANQ96GW7 911 aa11.36□□□□□ -0.59
CRNDE-202ENST00000502066 PDGFDQ9GZP0 370 aaPredicted RBP11.36□□□□□ -0.59
CRNDE-202ENST00000502066 TLL2Q9Y6L7 1015 aa11.36□□□□□ -0.59
CRNDE-202ENST00000502066 CHD2O14647 1828 aaKnown RBP11.36□□□□□ -0.59
CRNDE-202ENST00000502066 ADGRB2O60241 1585 aa11.36□□□□□ -0.59
CRNDE-202ENST00000502066 USP19O94966 1318 aa11.35□□□□□ -0.59
CRNDE-202ENST00000502066 TRIM37O94972 964 aa11.35□□□□□ -0.59
CRNDE-202ENST00000502066 UNC93B1Q9H1C4 597 aa11.35□□□□□ -0.59
CRNDE-202ENST00000502066 NXF1Q9UBU9 619 aaKnown RBP11.35□□□□□ -0.59
CRNDE-202ENST00000502066 CCDC9Q9Y3X0 531 aaKnown RBP11.35□□□□□ -0.59
CRNDE-202ENST00000502066 FMN1Q68DA7 1419 aa11.35□□□□□ -0.59
CRNDE-202ENST00000502066 CASZ1Q86V15 1759 aa11.34□□□□□ -0.59
CRNDE-202ENST00000502066 PPP1R15AO75807 674 aaPredicted RBP11.34□□□□□ -0.59
CRNDE-202ENST00000502066 GMPRP36959 345 aa11.34□□□□□ -0.59
CRNDE-202ENST00000502066 SLC16A10Q8TF71 515 aa11.34□□□□□ -0.59
CRNDE-202ENST00000502066 MOXD2PA6NHM9 499 aa11.33□□□□□ -0.6
CRNDE-202ENST00000502066 CFAP65Q6ZU64 1925 aaKnown RBP11.33□□□□□ -0.6
CRNDE-202ENST00000502066 TMEM2Q9UHN6 1383 aa11.32□□□□□ -0.6
CRNDE-202ENST00000502066 KIF3BO15066 747 aa11.32□□□□□ -0.6
CRNDE-202ENST00000502066 PRR7Q8TB68 274 aa11.32□□□□□ -0.6
CRNDE-202ENST00000502066 EVA1BQ9NVM1 165 aa11.32□□□□□ -0.6
CRNDE-202ENST00000502066 DLL1O00548 723 aa11.31□□□□□ -0.6
CRNDE-202ENST00000502066 RGS19P49795 217 aa11.31□□□□□ -0.6
CRNDE-202ENST00000502066 ZFP42Q96MM3 310 aa11.31□□□□□ -0.6
CRNDE-202ENST00000502066 GOLGB1Q14789 3259 aaKnown RBP11.31□□□□□ -0.6
CRNDE-202ENST00000502066 INO80Q9ULG1 1556 aaPredicted RBP11.31□□□□□ -0.6
CRNDE-202ENST00000502066 PTPRNQ16849 979 aa11.3□□□□□ -0.6
CRNDE-202ENST00000502066 ERVK-7P63135 1459 aa11.3□□□□□ -0.6
CRNDE-202ENST00000502066 SLIT2O94813 1529 aa11.3□□□□□ -0.6
CRNDE-202ENST00000502066 MST1RQ04912 1400 aa11.29□□□□□ -0.6
CRNDE-202ENST00000502066 COL22A1Q8NFW1 1626 aaPredicted RBP11.29□□□□□ -0.6
CRNDE-202ENST00000502066 KCNH2Q12809 1159 aa11.29□□□□□ -0.6
CRNDE-202ENST00000502066 VPS72Q15906 364 aa11.29□□□□□ -0.6
CRNDE-202ENST00000502066 MYOM2P54296 1465 aa11.28□□□□□ -0.6
CRNDE-202ENST00000502066 TTLL12Q14166 644 aaPredicted RBP11.28□□□□□ -0.6
CRNDE-202ENST00000502066 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.28□□□□□ -0.6
CRNDE-202ENST00000502066 MPNDQ8N594 471 aa11.28□□□□□ -0.6
CRNDE-202ENST00000502066 ZNF777Q9ULD5 760 aaPredicted RBP11.28□□□□□ -0.6
CRNDE-202ENST00000502066 PREX2Q70Z35 1606 aa11.27□□□□□ -0.6
CRNDE-202ENST00000502066 NNTQ13423 1086 aa11.27□□□□□ -0.61
CRNDE-202ENST00000502066 ZNF511Q8NB15 262 aa11.27□□□□□ -0.61
CRNDE-202ENST00000502066 ABHD8Q96I13 439 aa11.27□□□□□ -0.61
CRNDE-202ENST00000502066 ERBB4Q15303 1308 aa11.27□□□□□ -0.61
CRNDE-202ENST00000502066 SYCP2Q9BX26 1530 aa11.26□□□□□ -0.61
CRNDE-202ENST00000502066 SOBPA7XYQ1 873 aa11.26□□□□□ -0.61
CRNDE-202ENST00000502066 LORP23490 312 aaPredicted RBP11.26□□□□□ -0.61
CRNDE-202ENST00000502066 IRF7Q92985 503 aa11.26□□□□□ -0.61
CRNDE-202ENST00000502066 ARXQ96QS3 562 aa11.26□□□□□ -0.61
CRNDE-202ENST00000502066 TOMM70O94826 608 aa11.25□□□□□ -0.61
CRNDE-202ENST00000502066 CTHP32929 405 aa11.25□□□□□ -0.61
CRNDE-202ENST00000502066 MTMR2Q13614 643 aa11.25□□□□□ -0.61
CRNDE-202ENST00000502066 VSIG10Q8N0Z9 540 aa11.25□□□□□ -0.61
CRNDE-202ENST00000502066 SOS2Q07890 1332 aaPredicted RBP11.25□□□□□ -0.61
CRNDE-202ENST00000502066 TNRC18O15417 2968 aaPredicted RBP11.25□□□□□ -0.61
CRNDE-202ENST00000502066 H3BM21 787 aa11.24□□□□□ -0.61
CRNDE-202ENST00000502066 PURBQ96QR8 312 aaKnown RBP11.24□□□□□ -0.61
CRNDE-202ENST00000502066 PDE4DIPQ5VU43 2346 aa11.23□□□□□ -0.61
CRNDE-202ENST00000502066 CCDC85CA6NKD9 419 aa11.23□□□□□ -0.61
CRNDE-202ENST00000502066 VARSP26640 1264 aaKnown RBP11.23□□□□□ -0.61
CRNDE-202ENST00000502066 RANGAP1P46060 587 aaPredicted RBP11.23□□□□□ -0.61
CRNDE-202ENST00000502066 ZSCAN1Q8NBB4 408 aa11.23□□□□□ -0.61
CRNDE-202ENST00000502066 BEGAINQ9BUH8 593 aa11.23□□□□□ -0.61
CRNDE-202ENST00000502066 MAP3K5Q99683 1374 aa11.23□□□□□ -0.61
CRNDE-202ENST00000502066 TMEM131LA2VDJ0 1609 aa11.23□□□□□ -0.61
CRNDE-202ENST00000502066 GRIN3BO60391 1043 aa11.22□□□□□ -0.61
CRNDE-202ENST00000502066 ADCY9O60503 1353 aa11.22□□□□□ -0.61
CRNDE-202ENST00000502066 WDR4P57081 412 aaKnown RBP11.22□□□□□ -0.61
CRNDE-202ENST00000502066 MRPL14Q6P1L8 145 aaKnown RBP11.22□□□□□ -0.61
CRNDE-202ENST00000502066 GIGYF2Q6Y7W6 1299 aaKnown RBP11.22□□□□□ -0.61
CRNDE-202ENST00000502066 PCDHB15Q9Y5E8 787 aa11.22□□□□□ -0.61
CRNDE-202ENST00000502066 PIK3C2BO00750 1634 aa11.21□□□□□ -0.61
CRNDE-202ENST00000502066 DCCP43146 1447 aa11.21□□□□□ -0.61
CRNDE-202ENST00000502066 DHX29Q7Z478 1369 aaKnown RBP11.21□□□□□ -0.61
CRNDE-202ENST00000502066 PLEKHG3A1L390 1219 aa11.21□□□□□ -0.61
CRNDE-202ENST00000502066 TIMP2P16035 220 aa11.21□□□□□ -0.61
CRNDE-202ENST00000502066 ARID5BQ14865 1188 aa11.21□□□□□ -0.61
CRNDE-202ENST00000502066 FOXJ1Q92949 421 aa11.21□□□□□ -0.61
CRNDE-202ENST00000502066 ATP1B4Q9UN42 357 aaPredicted RBP11.21□□□□□ -0.61
CRNDE-202ENST00000502066 CDK11AQ9UQ88 783 aaPredicted RBP11.21□□□□□ -0.61
CRNDE-202ENST00000502066 EFCAB6Q5THR3 1501 aa11.2□□□□□ -0.62
CRNDE-202ENST00000502066 PITPNM2Q9BZ72 1349 aa11.2□□□□□ -0.62
CRNDE-202ENST00000502066 YBX3P16989 372 aaKnown RBP eCLIP11.2□□□□□ -0.62
CRNDE-202ENST00000502066 NPAS3Q8IXF0 933 aa11.2□□□□□ -0.62
CRNDE-202ENST00000502066 CFAP99D6REC4 459 aa11.19□□□□□ -0.62
CRNDE-202ENST00000502066 TBC1D2Q9BYX2 928 aa11.19□□□□□ -0.62
CRNDE-202ENST00000502066 MAP10Q9P2G4 905 aa11.19□□□□□ -0.62
CRNDE-202ENST00000502066 TROQ12816 1431 aaPredicted RBP11.18□□□□□ -0.62
CRNDE-202ENST00000502066 FAM181BA6NEQ2 426 aa11.18□□□□□ -0.62
CRNDE-202ENST00000502066 SCARF1Q14162 830 aa11.18□□□□□ -0.62
CRNDE-202ENST00000502066 DESI1Q6ICB0 168 aa11.18□□□□□ -0.62
CRNDE-202ENST00000502066 FAM196AQ6ZSG2 479 aa11.18□□□□□ -0.62
CRNDE-202ENST00000502066 BARGINQ6ZT62 677 aa11.18□□□□□ -0.62
CRNDE-202ENST00000502066 SPDYE5A6NIY4 337 aa11.17□□□□□ -0.62
CRNDE-202ENST00000502066 ADH1CP00326 375 aa11.17□□□□□ -0.62
CRNDE-202ENST00000502066 LYPD8Q6UX82 237 aa11.17□□□□□ -0.62
CRNDE-202ENST00000502066 KLF16Q9BXK1 252 aaPredicted RBP11.17□□□□□ -0.62
CRNDE-202ENST00000502066 MTFR1LQ9H019 292 aa11.17□□□□□ -0.62
CRNDE-202ENST00000502066 PRDM10Q9NQV6 1147 aa11.17□□□□□ -0.62
CRNDE-202ENST00000502066 CLIP1P30622 1438 aa11.17□□□□□ -0.62
CRNDE-202ENST00000502066 LAMC1P11047 1609 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms