RNA–Protein interactions for RNA: ENST00000498725.5

CCDC171-209, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-209ENST00000498725 NFATC2IPQ8NCF5 419 aa12.59□□□□□ -0.39
CCDC171-209ENST00000498725 DLEC1Q9Y238 1755 aa12.58□□□□□ -0.39
CCDC171-209ENST00000498725 HSPA1AP0DMV8 641 aaKnown RBP12.58□□□□□ -0.4
CCDC171-209ENST00000498725 HSPA1BP0DMV9 641 aaKnown RBP12.58□□□□□ -0.4
CCDC171-209ENST00000498725 PRELPP51888 382 aa12.58□□□□□ -0.4
CCDC171-209ENST00000498725 CACNA1SQ13698 1873 aa12.58□□□□□ -0.4
CCDC171-209ENST00000498725 C1orf141Q5JVX7 400 aa12.58□□□□□ -0.4
CCDC171-209ENST00000498725 SPINK5Q9NQ38 1064 aaPredicted RBP12.58□□□□□ -0.4
CCDC171-209ENST00000498725 POLRMTO00411 1230 aaKnown RBP12.57□□□□□ -0.4
CCDC171-209ENST00000498725 ZPR1O75312 459 aa12.57□□□□□ -0.4
CCDC171-209ENST00000498725 USPL1Q5W0Q7 1092 aa12.57□□□□□ -0.4
CCDC171-209ENST00000498725 AEBP1Q8IUX7 1158 aa12.57□□□□□ -0.4
CCDC171-209ENST00000498725 ZNF219Q9P2Y4 722 aaPredicted RBP12.56□□□□□ -0.4
CCDC171-209ENST00000498725 VEGFAP15692 232 aaPredicted RBP12.55□□□□□ -0.4
CCDC171-209ENST00000498725 TM4SF1P30408 202 aa12.55□□□□□ -0.4
CCDC171-209ENST00000498725 INTS5Q6P9B9 1019 aaKnown RBP12.55□□□□□ -0.4
CCDC171-209ENST00000498725 DNAJC10Q8IXB1 793 aa12.55□□□□□ -0.4
CCDC171-209ENST00000498725 GLTPD2A6NH11 291 aa12.54□□□□□ -0.4
CCDC171-209ENST00000498725 LMNB1P20700 586 aa12.54□□□□□ -0.4
CCDC171-209ENST00000498725 DSG3P32926 999 aa12.54□□□□□ -0.4
CCDC171-209ENST00000498725 AMOTQ4VCS5 1084 aa12.54□□□□□ -0.4
CCDC171-209ENST00000498725 NRXN2Q9P2S2 1712 aa12.54□□□□□ -0.4
CCDC171-209ENST00000498725 DICER1Q9UPY3 1922 aaKnown RBP12.53□□□□□ -0.4
CCDC171-209ENST00000498725 NFIXQ14938 502 aa12.53□□□□□ -0.4
CCDC171-209ENST00000498725 BICDL1Q6ZP65 573 aa12.53□□□□□ -0.4
CCDC171-209ENST00000498725 C2CD5Q86YS7 1000 aa12.53□□□□□ -0.4
CCDC171-209ENST00000498725 ANKRD31Q8N7Z5 1873 aa12.53□□□□□ -0.4
CCDC171-209ENST00000498725 SERPINB2P05120 415 aa12.52□□□□□ -0.41
CCDC171-209ENST00000498725 SLC39A6Q13433 755 aa12.52□□□□□ -0.41
CCDC171-209ENST00000498725 SULT6B1Q6IMI4 303 aa12.52□□□□□ -0.41
CCDC171-209ENST00000498725 TTLL6Q8N841 843 aa12.52□□□□□ -0.41
CCDC171-209ENST00000498725 KCNA4P22459 653 aa12.51□□□□□ -0.41
CCDC171-209ENST00000498725 CCDC24Q8N4L8 307 aa12.51□□□□□ -0.41
CCDC171-209ENST00000498725 LGR6Q9HBX8 967 aa12.51□□□□□ -0.41
CCDC171-209ENST00000498725 MKRN1Q9UHC7 482 aaKnown RBP12.51□□□□□ -0.41
CCDC171-209ENST00000498725 SOS1Q07889 1333 aaPredicted RBP12.51□□□□□ -0.41
CCDC171-209ENST00000498725 COL15A1P39059 1388 aa12.51□□□□□ -0.41
CCDC171-209ENST00000498725 CARMIL3Q8ND23 1372 aa12.51□□□□□ -0.41
CCDC171-209ENST00000498725 COL11A2P13942 1736 aaPredicted RBP12.51□□□□□ -0.41
CCDC171-209ENST00000498725 PCNTO95613 3336 aa12.5□□□□□ -0.41
CCDC171-209ENST00000498725 H0YIN7 160 aa12.5□□□□□ -0.41
CCDC171-209ENST00000498725 NFKBIEO00221 500 aa12.5□□□□□ -0.41
CCDC171-209ENST00000498725 ZNF622Q969S3 477 aaKnown RBP eCLIP12.5□□□□□ -0.41
CCDC171-209ENST00000498725 ZBTB1Q9Y2K1 713 aa12.5□□□□□ -0.41
CCDC171-209ENST00000498725 ZC3H4Q9UPT8 1303 aaKnown RBP12.5□□□□□ -0.41
CCDC171-209ENST00000498725 FER1L6Q2WGJ9 1857 aa12.5□□□□□ -0.41
CCDC171-209ENST00000498725 POTECB2RU33 542 aa12.49□□□□□ -0.41
CCDC171-209ENST00000498725 CYP19A1P11511 503 aaPredicted RBP12.49□□□□□ -0.41
CCDC171-209ENST00000498725 CANXP27824 592 aaKnown RBP12.49□□□□□ -0.41
CCDC171-209ENST00000498725 DPY19L2Q6NUT2 758 aa12.49□□□□□ -0.41
CCDC171-209ENST00000498725 MORC1Q86VD1 984 aa12.49□□□□□ -0.41
CCDC171-209ENST00000498725 BCL2L12Q9HB09 334 aa12.49□□□□□ -0.41
CCDC171-209ENST00000498725 NARFQ9UHQ1 456 aa12.49□□□□□ -0.41
CCDC171-209ENST00000498725 C21orf2O43822 256 aa12.48□□□□□ -0.41
CCDC171-209ENST00000498725 PANK3Q9H999 370 aa12.48□□□□□ -0.41
CCDC171-209ENST00000498725 SLC52A2Q9HAB3 445 aa12.48□□□□□ -0.41
CCDC171-209ENST00000498725 ZNF330Q9Y3S2 320 aaPredicted RBP12.48□□□□□ -0.41
CCDC171-209ENST00000498725 POTEIP0CG38 1075 aa12.47□□□□□ -0.41
CCDC171-209ENST00000498725 POTEJP0CG39 1038 aa12.47□□□□□ -0.41
CCDC171-209ENST00000498725 ERFEQ4G0M1 354 aa12.47□□□□□ -0.41
CCDC171-209ENST00000498725 SLX4Q8IY92 1834 aa12.46□□□□□ -0.41
CCDC171-209ENST00000498725 RNMTO43148 476 aaKnown RBP12.46□□□□□ -0.41
CCDC171-209ENST00000498725 HMOX1P09601 288 aa12.46□□□□□ -0.41
CCDC171-209ENST00000498725 AKAP4Q5JQC9 854 aa12.46□□□□□ -0.41
CCDC171-209ENST00000498725 UBR2Q8IWV8 1755 aa12.46□□□□□ -0.42
CCDC171-209ENST00000498725 SCN7AQ01118 1682 aa12.45□□□□□ -0.42
CCDC171-209ENST00000498725 FOXN1O15353 648 aa12.45□□□□□ -0.42
CCDC171-209ENST00000498725 DDNO94850 711 aaPredicted RBP12.45□□□□□ -0.42
CCDC171-209ENST00000498725 TBC1D9BQ66K14 1250 aa12.45□□□□□ -0.42
CCDC171-209ENST00000498725 CHADLQ6NUI6 762 aa12.45□□□□□ -0.42
CCDC171-209ENST00000498725 NPHP1O15259 732 aa12.44□□□□□ -0.42
CCDC171-209ENST00000498725 IL13P35225 146 aa12.44□□□□□ -0.42
CCDC171-209ENST00000498725 CREBZFQ9NS37 354 aa12.44□□□□□ -0.42
CCDC171-209ENST00000498725 MRC1P22897 1456 aa12.43□□□□□ -0.42
CCDC171-209ENST00000498725 SLC4A2P04920 1241 aa12.43□□□□□ -0.42
CCDC171-209ENST00000498725 TBC1D2BQ9UPU7 963 aa12.43□□□□□ -0.42
CCDC171-209ENST00000498725 ARFGEF2Q9Y6D5 1785 aa12.43□□□□□ -0.42
CCDC171-209ENST00000498725 PDE6BP35913 854 aa12.42□□□□□ -0.42
CCDC171-209ENST00000498725 PRR5LQ6MZQ0 368 aa12.42□□□□□ -0.42
CCDC171-209ENST00000498725 HSPA5P11021 654 aaKnown RBP12.41□□□□□ -0.42
CCDC171-209ENST00000498725 MTHFSDQ2M296 383 aaKnown RBP12.41□□□□□ -0.42
CCDC171-209ENST00000498725 EAPPQ56P03 285 aaPredicted RBP12.41□□□□□ -0.42
CCDC171-209ENST00000498725 TTC5Q8N0Z6 440 aa12.41□□□□□ -0.42
CCDC171-209ENST00000498725 AIDAQ96BJ3 306 aa12.41□□□□□ -0.42
CCDC171-209ENST00000498725 TAOK3Q9H2K8 898 aa12.41□□□□□ -0.42
CCDC171-209ENST00000498725 SCN4AP35499 1836 aa12.41□□□□□ -0.42
CCDC171-209ENST00000498725 A0A087WZG4 1122 aa12.4□□□□□ -0.42
CCDC171-209ENST00000498725 STARD3NLO95772 234 aa12.4□□□□□ -0.42
CCDC171-209ENST00000498725 BRIP1Q9BX63 1249 aa12.4□□□□□ -0.42
CCDC171-209ENST00000498725 CLEC11AQ9Y240 323 aa12.4□□□□□ -0.42
CCDC171-209ENST00000498725 KNSTRNQ9Y448 316 aa12.4□□□□□ -0.42
CCDC171-209ENST00000498725 BCORQ6W2J9 1755 aa12.4□□□□□ -0.42
CCDC171-209ENST00000498725 CNTNAP1P78357 1384 aa12.4□□□□□ -0.42
CCDC171-209ENST00000498725 SIPA1L3O60292 1781 aaPredicted RBP12.39□□□□□ -0.43
CCDC171-209ENST00000498725 VEGFBP49765 207 aa12.39□□□□□ -0.43
CCDC171-209ENST00000498725 EIF5P55010 431 aaKnown RBP12.39□□□□□ -0.43
CCDC171-209ENST00000498725 CNGB1Q14028 1251 aaPredicted RBP12.39□□□□□ -0.43
CCDC171-209ENST00000498725 PRPF40BQ6NWY9 871 aaKnown RBP12.39□□□□□ -0.43
CCDC171-209ENST00000498725 VSIG10Q8N0Z9 540 aa12.39□□□□□ -0.43
CCDC171-209ENST00000498725 A1BGP04217 495 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms