RNA–Protein interactions for RNA: ENST00000498644.5

MTA1-216, Transcript of metastasis associated 1, humanhuman

TSL 2

Gene MTA1, Length 871 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTA1-216ENST00000498644 PXDNLA1KZ92 1463 aa22.36■■□□□ 1.17
MTA1-216ENST00000498644 BTBD11A6QL63 1104 aa22.36■■□□□ 1.17
MTA1-216ENST00000498644 TM4SF1P30408 202 aa22.36■■□□□ 1.17
MTA1-216ENST00000498644 USPL1Q5W0Q7 1092 aa22.36■■□□□ 1.17
MTA1-216ENST00000498644 FMNL2Q96PY5 1086 aa22.36■■□□□ 1.17
MTA1-216ENST00000498644 COL15A1P39059 1388 aa22.36■■□□□ 1.17
MTA1-216ENST00000498644 KIAA1551Q9HCM1 1747 aa22.35■■□□□ 1.17
MTA1-216ENST00000498644 N4BP2Q86UW6 1770 aaPredicted RBP22.35■■□□□ 1.17
MTA1-216ENST00000498644 CANXP27824 592 aaKnown RBP22.34■■□□□ 1.17
MTA1-216ENST00000498644 A0A0G2JLW4 131 aa22.33■■□□□ 1.17
MTA1-216ENST00000498644 EIF5P55010 431 aaKnown RBP22.33■■□□□ 1.17
MTA1-216ENST00000498644 DDR1Q08345 913 aa22.33■■□□□ 1.17
MTA1-216ENST00000498644 WWC3Q9ULE0 1092 aa22.33■■□□□ 1.17
MTA1-216ENST00000498644 A0A087WZG4 1122 aa22.32■■□□□ 1.16
MTA1-216ENST00000498644 POLRMTO00411 1230 aaKnown RBP22.32■■□□□ 1.16
MTA1-216ENST00000498644 NEFMP07197 916 aa22.32■■□□□ 1.16
MTA1-216ENST00000498644 MCM10Q7L590 875 aa22.32■■□□□ 1.16
MTA1-216ENST00000498644 DPEP1P16444 411 aa22.31■■□□□ 1.16
MTA1-216ENST00000498644 RALBP1Q15311 655 aa22.31■■□□□ 1.16
MTA1-216ENST00000498644 KCNQ3O43525 872 aa22.3■■□□□ 1.16
MTA1-216ENST00000498644 PNNQ9H307 717 aaKnown RBP22.3■■□□□ 1.16
MTA1-216ENST00000498644 PLEKHF1Q96S99 279 aa22.29■■□□□ 1.16
MTA1-216ENST00000498644 BCL2L12Q9HB09 334 aa22.29■■□□□ 1.16
MTA1-216ENST00000498644 KCNA3P22001 575 aa22.28■■□□□ 1.16
MTA1-216ENST00000498644 IL6STP40189 918 aaPredicted RBP22.28■■□□□ 1.16
MTA1-216ENST00000498644 DDX10Q13206 875 aaKnown RBP22.28■■□□□ 1.16
MTA1-216ENST00000498644 DCTN1Q14203 1278 aa22.28■■□□□ 1.16
MTA1-216ENST00000498644 NFIXQ14938 502 aa22.28■■□□□ 1.16
MTA1-216ENST00000498644 BCS1LQ9Y276 419 aa22.28■■□□□ 1.16
MTA1-216ENST00000498644 BRCA1P38398 1863 aaKnown RBP22.28■■□□□ 1.16
MTA1-216ENST00000498644 A1BGP04217 495 aa22.27■■□□□ 1.16
MTA1-216ENST00000498644 TAF7Q15545 349 aaPredicted RBP22.27■■□□□ 1.16
MTA1-216ENST00000498644 PIM2Q9P1W9 311 aa22.26■■□□□ 1.15
MTA1-216ENST00000498644 DLG5Q8TDM6 1919 aa22.25■■□□□ 1.15
MTA1-216ENST00000498644 AFDNP55196 1824 aaKnown RBP22.25■■□□□ 1.15
MTA1-216ENST00000498644 SNRPA1P09661 255 aaKnown RBP22.25■■□□□ 1.15
MTA1-216ENST00000498644 NPM2Q86SE8 214 aaKnown RBP22.25■■□□□ 1.15
MTA1-216ENST00000498644 USP16Q9Y5T5 823 aa22.25■■□□□ 1.15
MTA1-216ENST00000498644 NRXN2Q9P2S2 1712 aa22.25■■□□□ 1.15
MTA1-216ENST00000498644 ADCY9O60503 1353 aa22.24■■□□□ 1.15
MTA1-216ENST00000498644 ATP10DQ9P241 1426 aa22.23■■□□□ 1.15
MTA1-216ENST00000498644 SERPINB2P05120 415 aa22.23■■□□□ 1.15
MTA1-216ENST00000498644 NFE2L2Q16236 605 aa22.23■■□□□ 1.15
MTA1-216ENST00000498644 ZNF330Q9Y3S2 320 aaPredicted RBP22.23■■□□□ 1.15
MTA1-216ENST00000498644 GIGYF1O75420 1035 aaPredicted RBP22.22■■□□□ 1.15
MTA1-216ENST00000498644 PNISRQ8TF01 805 aaKnown RBP22.22■■□□□ 1.15
MTA1-216ENST00000498644 TBC1D2BQ9UPU7 963 aa22.22■■□□□ 1.15
MTA1-216ENST00000498644 MAPK8IP3Q9UPT6 1336 aa22.22■■□□□ 1.15
MTA1-216ENST00000498644 ARFGEF1Q9Y6D6 1849 aa22.22■■□□□ 1.15
MTA1-216ENST00000498644 C1QTNF8P60827 252 aa22.21■■□□□ 1.15
MTA1-216ENST00000498644 DALRD3Q5D0E6 543 aaKnown RBP22.21■■□□□ 1.15
MTA1-216ENST00000498644 ARHGAP27Q6ZUM4 889 aa22.21■■□□□ 1.15
MTA1-216ENST00000498644 SCN7AQ01118 1682 aa22.2■■□□□ 1.15
MTA1-216ENST00000498644 PRAMEF22A3QJZ6 481 aa22.2■■□□□ 1.14
MTA1-216ENST00000498644 CHRNA5P30532 468 aa22.2■■□□□ 1.14
MTA1-216ENST00000498644 MYBBP1AQ9BQG0 1328 aaKnown RBP22.2■■□□□ 1.14
MTA1-216ENST00000498644 TBC1D9BQ66K14 1250 aa22.19■■□□□ 1.14
MTA1-216ENST00000498644 BICDL1Q6ZP65 573 aa22.19■■□□□ 1.14
MTA1-216ENST00000498644 CAMTA2O94983 1202 aa22.18■■□□□ 1.14
MTA1-216ENST00000498644 DZIP3Q86Y13 1208 aaKnown RBP22.18■■□□□ 1.14
MTA1-216ENST00000498644 GPBP1L1Q9HC44 474 aaPredicted RBP22.18■■□□□ 1.14
MTA1-216ENST00000498644 MIS18AQ9NYP9 233 aa22.18■■□□□ 1.14
MTA1-216ENST00000498644 CARMIL3Q8ND23 1372 aa22.16■■□□□ 1.14
MTA1-216ENST00000498644 SETDB2Q96T68 719 aa22.16■■□□□ 1.14
MTA1-216ENST00000498644 KDM3BQ7LBC6 1761 aa22.16■■□□□ 1.14
MTA1-216ENST00000498644 PIP4K2AP48426 406 aaPredicted RBP22.15■■□□□ 1.14
MTA1-216ENST00000498644 CLEC4GQ6UXB4 293 aa22.15■■□□□ 1.14
MTA1-216ENST00000498644 PDZRN3Q9UPQ7 1066 aa22.15■■□□□ 1.14
MTA1-216ENST00000498644 BCORQ6W2J9 1755 aa22.15■■□□□ 1.14
MTA1-216ENST00000498644 RGL2O15211 777 aa22.14■■□□□ 1.13
MTA1-216ENST00000498644 THUMPD2Q9BTF0 503 aaKnown RBP22.14■■□□□ 1.13
MTA1-216ENST00000498644 DLEC1Q9Y238 1755 aa22.14■■□□□ 1.13
MTA1-216ENST00000498644 NBPF26B4DH59 902 aa22.13■■□□□ 1.13
MTA1-216ENST00000498644 H0YIN7 160 aa22.13■■□□□ 1.13
MTA1-216ENST00000498644 RIPK4P57078 832 aa22.13■■□□□ 1.13
MTA1-216ENST00000498644 EIF4A1P60842 406 aaKnown RBP22.13■■□□□ 1.13
MTA1-216ENST00000498644 NBPF10Q6P3W6 841 aaKnown RBP22.13■■□□□ 1.13
MTA1-216ENST00000498644 C2CD5Q86YS7 1000 aa22.13■■□□□ 1.13
MTA1-216ENST00000498644 NBPF15Q8N660 670 aa22.13■■□□□ 1.13
MTA1-216ENST00000498644 ZNF526Q8TF50 670 aaPredicted RBP22.13■■□□□ 1.13
MTA1-216ENST00000498644 BRIP1Q9BX63 1249 aa22.13■■□□□ 1.13
MTA1-216ENST00000498644 PRR5LQ6MZQ0 368 aa22.12■■□□□ 1.13
MTA1-216ENST00000498644 TTLL6Q8N841 843 aa22.12■■□□□ 1.13
MTA1-216ENST00000498644 ZNF652Q9Y2D9 606 aa22.12■■□□□ 1.13
MTA1-216ENST00000498644 LAMB4A4D0S4 1761 aa22.12■■□□□ 1.13
MTA1-216ENST00000498644 PDE6BP35913 854 aa22.11■■□□□ 1.13
MTA1-216ENST00000498644 TMPOP42166 694 aaKnown RBP22.1■■□□□ 1.13
MTA1-216ENST00000498644 LMOD3Q0VAK6 560 aa22.1■■□□□ 1.13
MTA1-216ENST00000498644 ANKRD31Q8N7Z5 1873 aa22.1■■□□□ 1.13
MTA1-216ENST00000498644 C9orf131Q5VYM1 1079 aa22.09■■□□□ 1.13
MTA1-216ENST00000498644 CNBD1Q8NA66 436 aa22.09■■□□□ 1.13
MTA1-216ENST00000498644 BABAM1Q9NWV8 329 aa22.09■■□□□ 1.13
MTA1-216ENST00000498644 WDR43Q15061 677 aaKnown RBP eCLIP22.08■■□□□ 1.13
MTA1-216ENST00000498644 PRKRIP1Q9H875 184 aaPredicted RBP22.08■■□□□ 1.13
MTA1-216ENST00000498644 NPHP1O15259 732 aa22.07■■□□□ 1.12
MTA1-216ENST00000498644 ST5P78524 1137 aa22.07■■□□□ 1.12
MTA1-216ENST00000498644 TSPYL4Q9UJ04 414 aa22.07■■□□□ 1.12
MTA1-216ENST00000498644 SBF1O95248 1867 aa22.07■■□□□ 1.12
MTA1-216ENST00000498644 CCDC24Q8N4L8 307 aa22.06■■□□□ 1.12
MTA1-216ENST00000498644 RUNDC1Q96C34 613 aa22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms