RNA–Protein interactions for RNA: ENST00000498569.5

NF1-217, Transcript of neurofibromin 1, humanhuman

TSL 2

Gene NF1, Length 620 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-217ENST00000498569 CCDC125Q86Z20 511 aa7.88□□□□□ -1.15
NF1-217ENST00000498569 ZSCAN1Q8NBB4 408 aa7.88□□□□□ -1.15
NF1-217ENST00000498569 PPLO60437 1756 aa7.88□□□□□ -1.15
NF1-217ENST00000498569 NUP155O75694 1391 aa7.87□□□□□ -1.15
NF1-217ENST00000498569 NWD2Q9ULI1 1742 aa7.87□□□□□ -1.15
NF1-217ENST00000498569 CAPN5O15484 640 aaPredicted RBP7.87□□□□□ -1.15
NF1-217ENST00000498569 GMPRP36959 345 aa7.87□□□□□ -1.15
NF1-217ENST00000498569 GLI3P10071 1580 aa7.87□□□□□ -1.15
NF1-217ENST00000498569 CDC42BPGQ6DT37 1551 aa7.87□□□□□ -1.15
NF1-217ENST00000498569 RGPD8O14715 1765 aaPredicted RBP7.87□□□□□ -1.15
NF1-217ENST00000498569 RGPD1P0DJD0 1748 aa7.86□□□□□ -1.15
NF1-217ENST00000498569 ABCA3Q99758 1704 aa7.86□□□□□ -1.15
NF1-217ENST00000498569 IFT172Q9UG01 1749 aa7.86□□□□□ -1.15
NF1-217ENST00000498569 KIF1AQ12756 1690 aa7.86□□□□□ -1.15
NF1-217ENST00000498569 USP32Q8NFA0 1604 aa7.86□□□□□ -1.15
NF1-217ENST00000498569 SOS2Q07890 1332 aaPredicted RBP7.86□□□□□ -1.15
NF1-217ENST00000498569 BMP1P13497 986 aa7.86□□□□□ -1.15
NF1-217ENST00000498569 RETREG3Q86VR2 466 aa7.86□□□□□ -1.15
NF1-217ENST00000498569 FNBP4Q8N3X1 1017 aaPredicted RBP7.86□□□□□ -1.15
NF1-217ENST00000498569 NUDT12Q9BQG2 462 aa7.86□□□□□ -1.15
NF1-217ENST00000498569 MYOM2P54296 1465 aa7.86□□□□□ -1.15
NF1-217ENST00000498569 BLMP54132 1417 aaPredicted RBP7.86□□□□□ -1.15
NF1-217ENST00000498569 ROCK1Q13464 1354 aa7.85□□□□□ -1.15
NF1-217ENST00000498569 H3BM21 787 aa7.85□□□□□ -1.15
NF1-217ENST00000498569 SF3B2Q13435 895 aaKnown RBP7.85□□□□□ -1.15
NF1-217ENST00000498569 HLA-CQ95604 372 aa7.85□□□□□ -1.15
NF1-217ENST00000498569 BCL9LQ86UU0 1499 aa7.85□□□□□ -1.15
NF1-217ENST00000498569 NPHP3Q7Z494 1330 aa7.84□□□□□ -1.15
NF1-217ENST00000498569 FMN2Q9NZ56 1722 aa7.84□□□□□ -1.15
NF1-217ENST00000498569 PXDNQ92626 1479 aa7.84□□□□□ -1.15
NF1-217ENST00000498569 SIAH2O43255 324 aa7.84□□□□□ -1.15
NF1-217ENST00000498569 MDM2Q00987 491 aaPredicted RBP7.84□□□□□ -1.15
NF1-217ENST00000498569 TRIM46Q7Z4K8 759 aa7.84□□□□□ -1.15
NF1-217ENST00000498569 ORAI2Q96SN7 254 aa7.84□□□□□ -1.15
NF1-217ENST00000498569 KNDC1Q76NI1 1749 aa7.83□□□□□ -1.16
NF1-217ENST00000498569 RALGAPBQ86X10 1494 aa7.83□□□□□ -1.16
NF1-217ENST00000498569 GJD4Q96KN9 370 aaPredicted RBP7.83□□□□□ -1.16
NF1-217ENST00000498569 HFM1A2PYH4 1435 aa7.83□□□□□ -1.16
NF1-217ENST00000498569 ROBO2Q9HCK4 1378 aa7.83□□□□□ -1.16
NF1-217ENST00000498569 TULP1O00294 542 aaPredicted RBP7.82□□□□□ -1.16
NF1-217ENST00000498569 ESCO1Q5FWF5 840 aa7.82□□□□□ -1.16
NF1-217ENST00000498569 NUTM1Q86Y26 1132 aa7.82□□□□□ -1.16
NF1-217ENST00000498569 LRPPRCP42704 1394 aaKnown RBP7.82□□□□□ -1.16
NF1-217ENST00000498569 PRAG1Q86YV5 1406 aa7.81□□□□□ -1.16
NF1-217ENST00000498569 IRF6O14896 467 aa7.81□□□□□ -1.16
NF1-217ENST00000498569 CCNYL3P0C7X3 344 aa7.81□□□□□ -1.16
NF1-217ENST00000498569 MS4A1P11836 297 aa7.81□□□□□ -1.16
NF1-217ENST00000498569 CLCN1P35523 988 aa7.81□□□□□ -1.16
NF1-217ENST00000498569 ITGAEP38570 1179 aa7.81□□□□□ -1.16
NF1-217ENST00000498569 XPCQ01831 940 aaPredicted RBP7.81□□□□□ -1.16
NF1-217ENST00000498569 GUCA2AQ02747 115 aa7.81□□□□□ -1.16
NF1-217ENST00000498569 GPCPD1Q9NPB8 672 aa7.81□□□□□ -1.16
NF1-217ENST00000498569 NRAPQ86VF7 1730 aa7.81□□□□□ -1.16
NF1-217ENST00000498569 TNS1Q9HBL0 1735 aaKnown RBP7.81□□□□□ -1.16
NF1-217ENST00000498569 MINK1Q8N4C8 1332 aaPredicted RBP7.8□□□□□ -1.16
NF1-217ENST00000498569 SLIT2O94813 1529 aa7.8□□□□□ -1.16
NF1-217ENST00000498569 PLEKHG3A1L390 1219 aa7.8□□□□□ -1.16
NF1-217ENST00000498569 HAP1P54257 671 aaPredicted RBP7.8□□□□□ -1.16
NF1-217ENST00000498569 SH3BP2P78314 561 aa7.8□□□□□ -1.16
NF1-217ENST00000498569 PTCRAQ6ISU1 281 aaPredicted RBP7.8□□□□□ -1.16
NF1-217ENST00000498569 DEFB132Q7Z7B7 95 aa7.8□□□□□ -1.16
NF1-217ENST00000498569 UNC5CLQ8IV45 518 aa7.8□□□□□ -1.16
NF1-217ENST00000498569 NAIPQ13075 1403 aa7.79□□□□□ -1.16
NF1-217ENST00000498569 LORP23490 312 aaPredicted RBP7.79□□□□□ -1.16
NF1-217ENST00000498569 VEGFBP49765 207 aa7.79□□□□□ -1.16
NF1-217ENST00000498569 PTPRNQ16849 979 aa7.79□□□□□ -1.16
NF1-217ENST00000498569 SYMPKQ92797 1274 aaKnown RBP7.79□□□□□ -1.16
NF1-217ENST00000498569 CCDC9Q9Y3X0 531 aaKnown RBP7.79□□□□□ -1.16
NF1-217ENST00000498569 ADGRB2O60241 1585 aa7.79□□□□□ -1.16
NF1-217ENST00000498569 CCDC144AA2RUR9 1427 aa7.78□□□□□ -1.16
NF1-217ENST00000498569 FOXO3O43524 673 aa7.78□□□□□ -1.16
NF1-217ENST00000498569 BAG6P46379 1132 aa7.78□□□□□ -1.16
NF1-217ENST00000498569 SCARF1Q14162 830 aa7.78□□□□□ -1.16
NF1-217ENST00000498569 ZFP42Q96MM3 310 aa7.78□□□□□ -1.16
NF1-217ENST00000498569 FAM217BQ9NTX9 383 aaPredicted RBP7.78□□□□□ -1.16
NF1-217ENST00000498569 ERBB4Q15303 1308 aa7.78□□□□□ -1.16
NF1-217ENST00000498569 COL14A1Q05707 1796 aaKnown RBP7.77□□□□□ -1.17
NF1-217ENST00000498569 C6orf229H3BNL8 230 aa7.77□□□□□ -1.17
NF1-217ENST00000498569 FDX1P10109 184 aa7.77□□□□□ -1.17
NF1-217ENST00000498569 SEPT12Q8IYM1 358 aa7.77□□□□□ -1.17
NF1-217ENST00000498569 MPNDQ8N594 471 aa7.77□□□□□ -1.17
NF1-217ENST00000498569 CCDC102AQ96A19 550 aa7.77□□□□□ -1.17
NF1-217ENST00000498569 UNC93B1Q9H1C4 597 aa7.77□□□□□ -1.17
NF1-217ENST00000498569 TLL2Q9Y6L7 1015 aa7.77□□□□□ -1.17
NF1-217ENST00000498569 VARSP26640 1264 aaKnown RBP7.76□□□□□ -1.17
NF1-217ENST00000498569 NNTQ13423 1086 aa7.76□□□□□ -1.17
NF1-217ENST00000498569 MRPL14Q6P1L8 145 aaKnown RBP7.76□□□□□ -1.17
NF1-217ENST00000498569 KRT27Q7Z3Y8 459 aa7.76□□□□□ -1.17
NF1-217ENST00000498569 KRI1Q8N9T8 703 aaKnown RBP7.76□□□□□ -1.17
NF1-217ENST00000498569 TNS3Q68CZ2 1445 aa7.76□□□□□ -1.17
NF1-217ENST00000498569 ADH1CP00326 375 aa7.75□□□□□ -1.17
NF1-217ENST00000498569 HRCP23327 699 aa7.75□□□□□ -1.17
NF1-217ENST00000498569 VPS72Q15906 364 aa7.75□□□□□ -1.17
NF1-217ENST00000498569 RREB1Q92766 1687 aa7.75□□□□□ -1.17
NF1-217ENST00000498569 SPATA31A3Q5VYP0 1347 aa7.75□□□□□ -1.17
NF1-217ENST00000498569 RPGRIP1LQ68CZ1 1315 aa7.75□□□□□ -1.17
NF1-217ENST00000498569 TRPM3Q9HCF6 1732 aaPredicted RBP7.75□□□□□ -1.17
NF1-217ENST00000498569 UTRNP46939 3433 aa7.74□□□□□ -1.17
NF1-217ENST00000498569 THSD7AQ9UPZ6 1657 aa7.74□□□□□ -1.17
NF1-217ENST00000498569 VSIG8P0DPA2 414 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms