RNA–Protein interactions for RNA: ENST00000498532.5

HDAC11-220, Transcript of histone deacetylase 11, humanhuman

TSL 4

Gene HDAC11, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-220ENST00000498532 PRKAR2BP31323 418 aa23.28■■□□□ 1.32
HDAC11-220ENST00000498532 IL17REQ8NFR9 667 aa23.28■■□□□ 1.32
HDAC11-220ENST00000498532 NUDCQ9Y266 331 aa23.28■■□□□ 1.32
HDAC11-220ENST00000498532 POLRMTO00411 1230 aaKnown RBP23.27■■□□□ 1.32
HDAC11-220ENST00000498532 FCHSD2O94868 740 aa23.27■■□□□ 1.32
HDAC11-220ENST00000498532 STARD3NLO95772 234 aa23.27■■□□□ 1.32
HDAC11-220ENST00000498532 RSPH6AQ9H0K4 717 aa23.27■■□□□ 1.32
HDAC11-220ENST00000498532 NARFQ9UHQ1 456 aa23.27■■□□□ 1.32
HDAC11-220ENST00000498532 ARFGEF1Q9Y6D6 1849 aa23.26■■□□□ 1.31
HDAC11-220ENST00000498532 PPP2R1AP30153 589 aa23.26■■□□□ 1.31
HDAC11-220ENST00000498532 ZNF790Q6PG37 636 aa23.26■■□□□ 1.31
HDAC11-220ENST00000498532 CEMIPQ8WUJ3 1361 aa23.26■■□□□ 1.31
HDAC11-220ENST00000498532 CANXP27824 592 aaKnown RBP23.25■■□□□ 1.31
HDAC11-220ENST00000498532 TM4SF1P30408 202 aa23.25■■□□□ 1.31
HDAC11-220ENST00000498532 ZNF496Q96IT1 587 aaPredicted RBP23.25■■□□□ 1.31
HDAC11-220ENST00000498532 PHACTR3Q96KR7 559 aa23.25■■□□□ 1.31
HDAC11-220ENST00000498532 HEG1Q9ULI3 1381 aa23.25■■□□□ 1.31
HDAC11-220ENST00000498532 U2AF1L5P0DN76 240 aaPredicted RBP23.24■■□□□ 1.31
HDAC11-220ENST00000498532 U2AF1Q01081 240 aaKnown RBP eCLIP23.24■■□□□ 1.31
HDAC11-220ENST00000498532 ARHGAP27Q6ZUM4 889 aa23.24■■□□□ 1.31
HDAC11-220ENST00000498532 PIM2Q9P1W9 311 aa23.24■■□□□ 1.31
HDAC11-220ENST00000498532 KCNA3P22001 575 aa23.23■■□□□ 1.31
HDAC11-220ENST00000498532 AFDNP55196 1824 aaKnown RBP23.23■■□□□ 1.31
HDAC11-220ENST00000498532 NFIXQ14938 502 aa23.22■■□□□ 1.31
HDAC11-220ENST00000498532 DALRD3Q5D0E6 543 aaKnown RBP23.22■■□□□ 1.31
HDAC11-220ENST00000498532 TEX13AQ9BXU3 409 aaPredicted RBP23.22■■□□□ 1.31
HDAC11-220ENST00000498532 NRXN2Q9P2S2 1712 aa23.22■■□□□ 1.31
HDAC11-220ENST00000498532 FMNL2Q96PY5 1086 aa23.21■■□□□ 1.31
HDAC11-220ENST00000498532 SCN7AQ01118 1682 aa23.21■■□□□ 1.31
HDAC11-220ENST00000498532 A0A087WZG4 1122 aa23.2■■□□□ 1.3
HDAC11-220ENST00000498532 CHRNA5P30532 468 aa23.2■■□□□ 1.3
HDAC11-220ENST00000498532 BCL2L12Q9HB09 334 aa23.2■■□□□ 1.3
HDAC11-220ENST00000498532 CEP350Q5VT06 3117 aa23.19■■□□□ 1.3
HDAC11-220ENST00000498532 BTBD11A6QL63 1104 aa23.19■■□□□ 1.3
HDAC11-220ENST00000498532 EIF5P55010 431 aaKnown RBP23.19■■□□□ 1.3
HDAC11-220ENST00000498532 RTF1Q92541 710 aaKnown RBP23.19■■□□□ 1.3
HDAC11-220ENST00000498532 ZNF330Q9Y3S2 320 aaPredicted RBP23.18■■□□□ 1.3
HDAC11-220ENST00000498532 DLEC1Q9Y238 1755 aa23.17■■□□□ 1.3
HDAC11-220ENST00000498532 SERPINB2P05120 415 aa23.17■■□□□ 1.3
HDAC11-220ENST00000498532 IL6STP40189 918 aaPredicted RBP23.15■■□□□ 1.3
HDAC11-220ENST00000498532 BICDL1Q6ZP65 573 aa23.15■■□□□ 1.3
HDAC11-220ENST00000498532 MCM10Q7L590 875 aa23.15■■□□□ 1.3
HDAC11-220ENST00000498532 NPM2Q86SE8 214 aaKnown RBP23.15■■□□□ 1.3
HDAC11-220ENST00000498532 KCNQ3O43525 872 aa23.14■■□□□ 1.29
HDAC11-220ENST00000498532 C9orf131Q5VYM1 1079 aa23.13■■□□□ 1.29
HDAC11-220ENST00000498532 CARMIL3Q8ND23 1372 aa23.13■■□□□ 1.29
HDAC11-220ENST00000498532 KIF3CO14782 793 aa23.12■■□□□ 1.29
HDAC11-220ENST00000498532 A1BGP04217 495 aa23.12■■□□□ 1.29
HDAC11-220ENST00000498532 TBC1D2BQ9UPU7 963 aa23.12■■□□□ 1.29
HDAC11-220ENST00000498532 BCORQ6W2J9 1755 aa23.12■■□□□ 1.29
HDAC11-220ENST00000498532 TBC1D9BQ66K14 1250 aa23.11■■□□□ 1.29
HDAC11-220ENST00000498532 HTATSF1O43719 755 aaKnown RBP23.1■■□□□ 1.29
HDAC11-220ENST00000498532 NEFMP07197 916 aa23.1■■□□□ 1.29
HDAC11-220ENST00000498532 DCTN1Q14203 1278 aa23.09■■□□□ 1.29
HDAC11-220ENST00000498532 C2CD5Q86YS7 1000 aa23.09■■□□□ 1.29
HDAC11-220ENST00000498532 RNF181Q9P0P0 153 aa23.09■■□□□ 1.29
HDAC11-220ENST00000498532 H0YIN7 160 aa23.08■■□□□ 1.29
HDAC11-220ENST00000498532 SNRPA1P09661 255 aaKnown RBP23.08■■□□□ 1.29
HDAC11-220ENST00000498532 HSPA6P17066 643 aa23.08■■□□□ 1.29
HDAC11-220ENST00000498532 ANKRD31Q8N7Z5 1873 aa23.08■■□□□ 1.29
HDAC11-220ENST00000498532 SBF1O95248 1867 aa23.07■■□□□ 1.28
HDAC11-220ENST00000498532 CAMTA2O94983 1202 aa23.07■■□□□ 1.28
HDAC11-220ENST00000498532 DZIP3Q86Y13 1208 aaKnown RBP23.07■■□□□ 1.28
HDAC11-220ENST00000498532 TTLL6Q8N841 843 aa23.07■■□□□ 1.28
HDAC11-220ENST00000498532 USP16Q9Y5T5 823 aa23.07■■□□□ 1.28
HDAC11-220ENST00000498532 DLG5Q8TDM6 1919 aa23.07■■□□□ 1.28
HDAC11-220ENST00000498532 COL11A2P13942 1736 aaPredicted RBP23.06■■□□□ 1.28
HDAC11-220ENST00000498532 PRAMEF22A3QJZ6 481 aa23.06■■□□□ 1.28
HDAC11-220ENST00000498532 NMRK2Q9NPI5 230 aa23.06■■□□□ 1.28
HDAC11-220ENST00000498532 LAMB4A4D0S4 1761 aa23.05■■□□□ 1.28
HDAC11-220ENST00000498532 NPHP1O15259 732 aa23.05■■□□□ 1.28
HDAC11-220ENST00000498532 PIP4K2AP48426 406 aaPredicted RBP23.05■■□□□ 1.28
HDAC11-220ENST00000498532 PRR5LQ6MZQ0 368 aa23.05■■□□□ 1.28
HDAC11-220ENST00000498532 SETDB2Q96T68 719 aa23.05■■□□□ 1.28
HDAC11-220ENST00000498532 PDE6BP35913 854 aa23.04■■□□□ 1.28
HDAC11-220ENST00000498532 TAF7Q15545 349 aaPredicted RBP23.04■■□□□ 1.28
HDAC11-220ENST00000498532 CNBD1Q8NA66 436 aa23.04■■□□□ 1.28
HDAC11-220ENST00000498532 BRIP1Q9BX63 1249 aa23.04■■□□□ 1.28
HDAC11-220ENST00000498532 KDM2BQ8NHM5 1336 aa23.04■■□□□ 1.28
HDAC11-220ENST00000498532 TOMM70O94826 608 aa23.03■■□□□ 1.28
HDAC11-220ENST00000498532 RASSF7Q02833 373 aa23.03■■□□□ 1.28
HDAC11-220ENST00000498532 PDZRN3Q9UPQ7 1066 aa23.03■■□□□ 1.28
HDAC11-220ENST00000498532 KDM3BQ7LBC6 1761 aa23.02■■□□□ 1.28
HDAC11-220ENST00000498532 CCDC24Q8N4L8 307 aa23.02■■□□□ 1.28
HDAC11-220ENST00000498532 ZNF652Q9Y2D9 606 aa23.02■■□□□ 1.28
HDAC11-220ENST00000498532 TNRC6CQ9HCJ0 1690 aaKnown RBP23.02■■□□□ 1.28
HDAC11-220ENST00000498532 ST5P78524 1137 aa23.01■■□□□ 1.27
HDAC11-220ENST00000498532 ZNF622Q969S3 477 aaKnown RBP eCLIP23.01■■□□□ 1.27
HDAC11-220ENST00000498532 TIAM2Q8IVF5 1701 aa23.01■■□□□ 1.27
HDAC11-220ENST00000498532 MAPK8IP3Q9UPT6 1336 aa23.01■■□□□ 1.27
HDAC11-220ENST00000498532 ZC3H4Q9UPT8 1303 aaKnown RBP23.01■■□□□ 1.27
HDAC11-220ENST00000498532 LMNB1P20700 586 aa23■■□□□ 1.27
HDAC11-220ENST00000498532 PLEKHF1Q96S99 279 aa23■■□□□ 1.27
HDAC11-220ENST00000498532 MIS18AQ9NYP9 233 aa23■■□□□ 1.27
HDAC11-220ENST00000498532 NFE2L2Q16236 605 aa22.99■■□□□ 1.27
HDAC11-220ENST00000498532 CLEC4GQ6UXB4 293 aa22.99■■□□□ 1.27
HDAC11-220ENST00000498532 C16orf71Q8IYS4 520 aaPredicted RBP22.99■■□□□ 1.27
HDAC11-220ENST00000498532 PNISRQ8TF01 805 aaKnown RBP22.99■■□□□ 1.27
HDAC11-220ENST00000498532 PNNQ9H307 717 aaKnown RBP22.99■■□□□ 1.27
HDAC11-220ENST00000498532 NBPF26B4DH59 902 aa22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms