RNA–Protein interactions for RNA: ENST00000498339.1

CDK9-205, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 458 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-205ENST00000498339 VEGFAP15692 232 aaPredicted RBP16.03■□□□□ 0.16
CDK9-205ENST00000498339 LMNB1P20700 586 aa16.03■□□□□ 0.16
CDK9-205ENST00000498339 USPL1Q5W0Q7 1092 aa16.03■□□□□ 0.16
CDK9-205ENST00000498339 DICER1Q9UPY3 1922 aaKnown RBP16.02■□□□□ 0.15
CDK9-205ENST00000498339 GLTPD2A6NH11 291 aa16.01■□□□□ 0.15
CDK9-205ENST00000498339 AEBP1Q8IUX7 1158 aa16.01■□□□□ 0.15
CDK9-205ENST00000498339 TM4SF1P30408 202 aa16■□□□□ 0.15
CDK9-205ENST00000498339 INTS5Q6P9B9 1019 aaKnown RBP16■□□□□ 0.15
CDK9-205ENST00000498339 DNAJC10Q8IXB1 793 aa16■□□□□ 0.15
CDK9-205ENST00000498339 COL15A1P39059 1388 aa16■□□□□ 0.15
CDK9-205ENST00000498339 SOS1Q07889 1333 aaPredicted RBP15.98■□□□□ 0.15
CDK9-205ENST00000498339 NFIXQ14938 502 aa15.98■□□□□ 0.15
CDK9-205ENST00000498339 SULT6B1Q6IMI4 303 aa15.98■□□□□ 0.15
CDK9-205ENST00000498339 C2CD5Q86YS7 1000 aa15.98■□□□□ 0.15
CDK9-205ENST00000498339 TTLL6Q8N841 843 aa15.98■□□□□ 0.15
CDK9-205ENST00000498339 ANKRD31Q8N7Z5 1873 aa15.97■□□□□ 0.15
CDK9-205ENST00000498339 COL11A2P13942 1736 aaPredicted RBP15.97■□□□□ 0.15
CDK9-205ENST00000498339 H0YIN7 160 aa15.96■□□□□ 0.15
CDK9-205ENST00000498339 SERPINB2P05120 415 aa15.96■□□□□ 0.15
CDK9-205ENST00000498339 DPY19L2Q6NUT2 758 aa15.96■□□□□ 0.15
CDK9-205ENST00000498339 ZNF219Q9P2Y4 722 aaPredicted RBP15.96■□□□□ 0.15
CDK9-205ENST00000498339 NARFQ9UHQ1 456 aa15.96■□□□□ 0.15
CDK9-205ENST00000498339 FER1L6Q2WGJ9 1857 aa15.96■□□□□ 0.15
CDK9-205ENST00000498339 BICDL1Q6ZP65 573 aa15.95■□□□□ 0.14
CDK9-205ENST00000498339 ZBTB1Q9Y2K1 713 aa15.95■□□□□ 0.14
CDK9-205ENST00000498339 CARMIL3Q8ND23 1372 aa15.95■□□□□ 0.14
CDK9-205ENST00000498339 NFKBIEO00221 500 aa15.94■□□□□ 0.14
CDK9-205ENST00000498339 CYP19A1P11511 503 aaPredicted RBP15.94■□□□□ 0.14
CDK9-205ENST00000498339 SLC39A6Q13433 755 aa15.94■□□□□ 0.14
CDK9-205ENST00000498339 AKAP4Q5JQC9 854 aa15.94■□□□□ 0.14
CDK9-205ENST00000498339 MORC1Q86VD1 984 aa15.94■□□□□ 0.14
CDK9-205ENST00000498339 ZNF622Q969S3 477 aaKnown RBP eCLIP15.94■□□□□ 0.14
CDK9-205ENST00000498339 SLC52A2Q9HAB3 445 aa15.94■□□□□ 0.14
CDK9-205ENST00000498339 MKRN1Q9UHC7 482 aaKnown RBP15.94■□□□□ 0.14
CDK9-205ENST00000498339 MRC1P22897 1456 aa15.94■□□□□ 0.14
CDK9-205ENST00000498339 SCN7AQ01118 1682 aa15.94■□□□□ 0.14
CDK9-205ENST00000498339 UBR2Q8IWV8 1755 aa15.94■□□□□ 0.14
CDK9-205ENST00000498339 CANXP27824 592 aaKnown RBP15.93■□□□□ 0.14
CDK9-205ENST00000498339 ERFEQ4G0M1 354 aa15.93■□□□□ 0.14
CDK9-205ENST00000498339 PANK3Q9H999 370 aa15.92■□□□□ 0.14
CDK9-205ENST00000498339 ARFGEF2Q9Y6D5 1785 aa15.91■□□□□ 0.14
CDK9-205ENST00000498339 NPHP1O15259 732 aa15.91■□□□□ 0.14
CDK9-205ENST00000498339 C21orf2O43822 256 aa15.91■□□□□ 0.14
CDK9-205ENST00000498339 BCL2L12Q9HB09 334 aa15.91■□□□□ 0.14
CDK9-205ENST00000498339 CREBZFQ9NS37 354 aa15.91■□□□□ 0.14
CDK9-205ENST00000498339 ZNF330Q9Y3S2 320 aaPredicted RBP15.91■□□□□ 0.14
CDK9-205ENST00000498339 CHADLQ6NUI6 762 aa15.9■□□□□ 0.14
CDK9-205ENST00000498339 LGR6Q9HBX8 967 aa15.9■□□□□ 0.14
CDK9-205ENST00000498339 POTECB2RU33 542 aa15.89■□□□□ 0.13
CDK9-205ENST00000498339 AIDAQ96BJ3 306 aa15.89■□□□□ 0.13
CDK9-205ENST00000498339 SCN4AP35499 1836 aa15.89■□□□□ 0.13
CDK9-205ENST00000498339 SLX4Q8IY92 1834 aa15.89■□□□□ 0.13
CDK9-205ENST00000498339 RNMTO43148 476 aaKnown RBP15.88■□□□□ 0.13
CDK9-205ENST00000498339 PDE6BP35913 854 aa15.88■□□□□ 0.13
CDK9-205ENST00000498339 TTC5Q8N0Z6 440 aa15.88■□□□□ 0.13
CDK9-205ENST00000498339 CCDC24Q8N4L8 307 aa15.88■□□□□ 0.13
CDK9-205ENST00000498339 TAOK3Q9H2K8 898 aa15.88■□□□□ 0.13
CDK9-205ENST00000498339 HMOX1P09601 288 aa15.87■□□□□ 0.13
CDK9-205ENST00000498339 IL13P35225 146 aa15.87■□□□□ 0.13
CDK9-205ENST00000498339 TBC1D9BQ66K14 1250 aa15.87■□□□□ 0.13
CDK9-205ENST00000498339 BCORQ6W2J9 1755 aa15.86■□□□□ 0.13
CDK9-205ENST00000498339 A0A087WZG4 1122 aa15.86■□□□□ 0.13
CDK9-205ENST00000498339 FOXN1O15353 648 aa15.86■□□□□ 0.13
CDK9-205ENST00000498339 DDNO94850 711 aaPredicted RBP15.86■□□□□ 0.13
CDK9-205ENST00000498339 STARD3NLO95772 234 aa15.86■□□□□ 0.13
CDK9-205ENST00000498339 POTEIP0CG38 1075 aa15.86■□□□□ 0.13
CDK9-205ENST00000498339 POTEJP0CG39 1038 aa15.86■□□□□ 0.13
CDK9-205ENST00000498339 VSIG10Q8N0Z9 540 aa15.86■□□□□ 0.13
CDK9-205ENST00000498339 PDZRN3Q9UPQ7 1066 aa15.86■□□□□ 0.13
CDK9-205ENST00000498339 CNTNAP1P78357 1384 aa15.86■□□□□ 0.13
CDK9-205ENST00000498339 NPM2Q86SE8 214 aaKnown RBP15.85■□□□□ 0.13
CDK9-205ENST00000498339 BRIP1Q9BX63 1249 aa15.85■□□□□ 0.13
CDK9-205ENST00000498339 IQCA1LA6NCM1 817 aa15.84■□□□□ 0.13
CDK9-205ENST00000498339 ST5P78524 1137 aa15.84■□□□□ 0.13
CDK9-205ENST00000498339 PRR5LQ6MZQ0 368 aa15.84■□□□□ 0.13
CDK9-205ENST00000498339 CNBD1Q8NA66 436 aa15.84■□□□□ 0.13
CDK9-205ENST00000498339 KNSTRNQ9Y448 316 aa15.84■□□□□ 0.13
CDK9-205ENST00000498339 SIPA1L3O60292 1781 aaPredicted RBP15.83■□□□□ 0.12
CDK9-205ENST00000498339 CTCFP49711 727 aaPredicted RBP15.83■□□□□ 0.12
CDK9-205ENST00000498339 EIF5P55010 431 aaKnown RBP15.83■□□□□ 0.12
CDK9-205ENST00000498339 TBC1D2BQ9UPU7 963 aa15.83■□□□□ 0.12
CDK9-205ENST00000498339 LTBP3Q9NS15 1303 aa15.83■□□□□ 0.12
CDK9-205ENST00000498339 EIF4G2P78344 907 aaKnown RBP eCLIP15.82■□□□□ 0.12
CDK9-205ENST00000498339 MTHFSDQ2M296 383 aaKnown RBP15.82■□□□□ 0.12
CDK9-205ENST00000498339 EAPPQ56P03 285 aaPredicted RBP15.82■□□□□ 0.12
CDK9-205ENST00000498339 SOGA3Q5TF21 947 aa15.82■□□□□ 0.12
CDK9-205ENST00000498339 PRPF40BQ6NWY9 871 aaKnown RBP15.82■□□□□ 0.12
CDK9-205ENST00000498339 LDHDQ86WU2 507 aa15.82■□□□□ 0.12
CDK9-205ENST00000498339 CNKSR1Q969H4 720 aa15.82■□□□□ 0.12
CDK9-205ENST00000498339 PRDM10Q9NQV6 1147 aa15.82■□□□□ 0.12
CDK9-205ENST00000498339 SETDB2Q96T68 719 aa15.81■□□□□ 0.12
CDK9-205ENST00000498339 TMEM88BA6NKF7 163 aa15.8■□□□□ 0.12
CDK9-205ENST00000498339 HSPA5P11021 654 aaKnown RBP15.8■□□□□ 0.12
CDK9-205ENST00000498339 TEFQ10587 303 aa15.8■□□□□ 0.12
CDK9-205ENST00000498339 STYK1Q6J9G0 422 aa15.8■□□□□ 0.12
CDK9-205ENST00000498339 CLEC11AQ9Y240 323 aa15.8■□□□□ 0.12
CDK9-205ENST00000498339 HEG1Q9ULI3 1381 aa15.79■□□□□ 0.12
CDK9-205ENST00000498339 PASKQ96RG2 1323 aa15.79■□□□□ 0.12
CDK9-205ENST00000498339 VEGFBP49765 207 aa15.79■□□□□ 0.12
CDK9-205ENST00000498339 MASTLQ96GX5 879 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms