RNA–Protein interactions for RNA: ENST00000498187.6

NKX2-1-202, Transcript of NK2 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NKX2-1, Length 2,338 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-202ENST00000498187 SSH3Q8TE77 659 aa23.94■■□□□ 1.42
NKX2-1-202ENST00000498187 ANAPC15P60006 121 aa23.94■■□□□ 1.42
NKX2-1-202ENST00000498187 ZNF142P52746 1687 aaPredicted RBP23.94■■□□□ 1.42
NKX2-1-202ENST00000498187 ZNF500O60304 480 aaPredicted RBP23.93■■□□□ 1.42
NKX2-1-202ENST00000498187 RBM27Q9P2N5 1060 aaKnown RBP23.93■■□□□ 1.42
NKX2-1-202ENST00000498187 AOX1Q06278 1338 aa23.93■■□□□ 1.42
NKX2-1-202ENST00000498187 CHAMP1Q96JM3 812 aa23.93■■□□□ 1.42
NKX2-1-202ENST00000498187 PDCL3Q9H2J4 239 aa23.93■■□□□ 1.42
NKX2-1-202ENST00000498187 PPP1R42Q7Z4L9 355 aa23.92■■□□□ 1.42
NKX2-1-202ENST00000498187 NUTM1Q86Y26 1132 aa23.92■■□□□ 1.42
NKX2-1-202ENST00000498187 CEMIPQ8WUJ3 1361 aa23.92■■□□□ 1.42
NKX2-1-202ENST00000498187 EIF2S2P20042 333 aaKnown RBP23.91■■□□□ 1.42
NKX2-1-202ENST00000498187 MCM5P33992 734 aa23.91■■□□□ 1.42
NKX2-1-202ENST00000498187 FOXD4L5Q5VV16 416 aaPredicted RBP23.91■■□□□ 1.42
NKX2-1-202ENST00000498187 FOXD4L4Q8WXT5 416 aaPredicted RBP23.91■■□□□ 1.42
NKX2-1-202ENST00000498187 TMEM63CQ9P1W3 806 aa23.91■■□□□ 1.42
NKX2-1-202ENST00000498187 CUL4AQ13619 759 aa23.9■■□□□ 1.42
NKX2-1-202ENST00000498187 NOL8Q76FK4 1167 aaKnown RBP23.9■■□□□ 1.42
NKX2-1-202ENST00000498187 SURF6O75683 361 aaKnown RBP23.9■■□□□ 1.42
NKX2-1-202ENST00000498187 CHD2O14647 1828 aaKnown RBP23.9■■□□□ 1.42
NKX2-1-202ENST00000498187 RAB11FIP3O75154 756 aa23.89■■□□□ 1.42
NKX2-1-202ENST00000498187 POLA2Q14181 598 aa23.89■■□□□ 1.42
NKX2-1-202ENST00000498187 SYCE3A1L190 88 aa23.89■■□□□ 1.41
NKX2-1-202ENST00000498187 IL25Q9H293 177 aa23.89■■□□□ 1.41
NKX2-1-202ENST00000498187 SETD1BQ9UPS6 1966 aaKnown RBP23.89■■□□□ 1.41
NKX2-1-202ENST00000498187 BRD1O95696 1058 aa23.88■■□□□ 1.41
NKX2-1-202ENST00000498187 EIF4A1P60842 406 aaKnown RBP23.88■■□□□ 1.41
NKX2-1-202ENST00000498187 VSIG10Q8N0Z9 540 aa23.88■■□□□ 1.41
NKX2-1-202ENST00000498187 IP6K1Q92551 441 aa23.88■■□□□ 1.41
NKX2-1-202ENST00000498187 INTS4Q96HW7 963 aaKnown RBP23.88■■□□□ 1.41
NKX2-1-202ENST00000498187 PHF8Q9UPP1 1060 aa23.88■■□□□ 1.41
NKX2-1-202ENST00000498187 MED1Q15648 1581 aaPredicted RBP23.88■■□□□ 1.41
NKX2-1-202ENST00000498187 ANKLE2Q86XL3 938 aa23.88■■□□□ 1.41
NKX2-1-202ENST00000498187 IL17RAQ96F46 866 aa23.88■■□□□ 1.41
NKX2-1-202ENST00000498187 LGR6Q9HBX8 967 aa23.88■■□□□ 1.41
NKX2-1-202ENST00000498187 ZKSCAN5Q9Y2L8 839 aa23.88■■□□□ 1.41
NKX2-1-202ENST00000498187 NBPF6Q5VWK0 638 aa23.87■■□□□ 1.41
NKX2-1-202ENST00000498187 RHPN1Q8TCX5 695 aa23.87■■□□□ 1.41
NKX2-1-202ENST00000498187 NBPF4Q96M43 638 aa23.87■■□□□ 1.41
NKX2-1-202ENST00000498187 UPF3BQ9BZI7 483 aaKnown RBP23.87■■□□□ 1.41
NKX2-1-202ENST00000498187 KDM3BQ7LBC6 1761 aa23.87■■□□□ 1.41
NKX2-1-202ENST00000498187 SRGAP3O43295 1099 aa23.87■■□□□ 1.41
NKX2-1-202ENST00000498187 CHPF2Q9P2E5 772 aa23.87■■□□□ 1.41
NKX2-1-202ENST00000498187 CCDC39Q9UFE4 941 aa23.87■■□□□ 1.41
NKX2-1-202ENST00000498187 MAP4K4O95819 1239 aaPredicted RBP23.86■■□□□ 1.41
NKX2-1-202ENST00000498187 NBPF7P0C2Y1 421 aaPredicted RBP23.86■■□□□ 1.41
NKX2-1-202ENST00000498187 CSPP1Q1MSJ5 1256 aa23.86■■□□□ 1.41
NKX2-1-202ENST00000498187 EIF2AK3Q9NZJ5 1116 aaKnown RBP23.86■■□□□ 1.41
NKX2-1-202ENST00000498187 PI4K2BQ8TCG2 481 aa23.85■■□□□ 1.41
NKX2-1-202ENST00000498187 NFAT5O94916 1531 aa23.85■■□□□ 1.41
NKX2-1-202ENST00000498187 SYAP1Q96A49 352 aaPredicted RBP23.85■■□□□ 1.41
NKX2-1-202ENST00000498187 NSFL1CQ9UNZ2 370 aaKnown RBP23.85■■□□□ 1.41
NKX2-1-202ENST00000498187 DNAAF4Q8WXU2 420 aa23.84■■□□□ 1.41
NKX2-1-202ENST00000498187 KCNQ3O43525 872 aa23.84■■□□□ 1.41
NKX2-1-202ENST00000498187 HOXB7P09629 217 aa23.84■■□□□ 1.41
NKX2-1-202ENST00000498187 HSPA4P34932 840 aa23.84■■□□□ 1.41
NKX2-1-202ENST00000498187 BEND3Q5T5X7 828 aa23.84■■□□□ 1.41
NKX2-1-202ENST00000498187 KIF1BPQ96EK5 621 aa23.84■■□□□ 1.41
NKX2-1-202ENST00000498187 R3HCC1Q9Y3T6 440 aaKnown RBP23.84■■□□□ 1.41
NKX2-1-202ENST00000498187 PI4KAP2A4QPH2 592 aa23.83■■□□□ 1.41
NKX2-1-202ENST00000498187 EPB41L2O43491 1005 aaKnown RBP23.83■■□□□ 1.41
NKX2-1-202ENST00000498187 PI4KAP1Q8N8J0 262 aa23.83■■□□□ 1.41
NKX2-1-202ENST00000498187 RGPD2P0DJD1 1756 aa23.83■■□□□ 1.4
NKX2-1-202ENST00000498187 ZBTB7CA1YPR0 619 aa23.83■■□□□ 1.4
NKX2-1-202ENST00000498187 KDM4FA0A1W2PPD8 638 aa23.82■■□□□ 1.4
NKX2-1-202ENST00000498187 ANXA1P04083 346 aa23.81■■□□□ 1.4
NKX2-1-202ENST00000498187 LMO7Q8WWI1 1683 aa23.81■■□□□ 1.4
NKX2-1-202ENST00000498187 XPCQ01831 940 aaPredicted RBP23.81■■□□□ 1.4
NKX2-1-202ENST00000498187 TEFQ10587 303 aa23.8■■□□□ 1.4
NKX2-1-202ENST00000498187 RBM33Q96EV2 1170 aaKnown RBP23.8■■□□□ 1.4
NKX2-1-202ENST00000498187 TSPY26PQ9H489 355 aa23.8■■□□□ 1.4
NKX2-1-202ENST00000498187 BTBD11A6QL63 1104 aa23.79■■□□□ 1.4
NKX2-1-202ENST00000498187 SGSM2O43147 1006 aa23.79■■□□□ 1.4
NKX2-1-202ENST00000498187 PHF14O94880 888 aa23.79■■□□□ 1.4
NKX2-1-202ENST00000498187 CHMP4AQ9BY43 222 aa23.79■■□□□ 1.4
NKX2-1-202ENST00000498187 RAD50Q92878 1312 aa23.79■■□□□ 1.4
NKX2-1-202ENST00000498187 ZNF530Q6P9A1 599 aaPredicted RBP23.79■■□□□ 1.4
NKX2-1-202ENST00000498187 CNTROBQ8N137 903 aa23.79■■□□□ 1.4
NKX2-1-202ENST00000498187 LRRC59Q96AG4 307 aaKnown RBP23.79■■□□□ 1.4
NKX2-1-202ENST00000498187 ADCY9O60503 1353 aa23.79■■□□□ 1.4
NKX2-1-202ENST00000498187 AKAP4Q5JQC9 854 aa23.78■■□□□ 1.4
NKX2-1-202ENST00000498187 MAP7D2Q96T17 732 aa23.78■■□□□ 1.4
NKX2-1-202ENST00000498187 MPRIPQ6WCQ1 1025 aa23.78■■□□□ 1.4
NKX2-1-202ENST00000498187 ZMYND15Q9H091 742 aa23.77■■□□□ 1.4
NKX2-1-202ENST00000498187 PSME1Q06323 249 aa23.77■■□□□ 1.4
NKX2-1-202ENST00000498187 HSP90AB4PQ58FF6 505 aa23.77■■□□□ 1.4
NKX2-1-202ENST00000498187 RNF214Q8ND24 703 aa23.77■■□□□ 1.4
NKX2-1-202ENST00000498187 KCNH5Q8NCM2 988 aa23.76■■□□□ 1.39
NKX2-1-202ENST00000498187 LSG1Q9H089 658 aaKnown RBP23.76■■□□□ 1.39
NKX2-1-202ENST00000498187 ADGRL3Q9HAR2 1447 aa23.76■■□□□ 1.39
NKX2-1-202ENST00000498187 WDR33Q9C0J8 1336 aaKnown RBP23.76■■□□□ 1.39
NKX2-1-202ENST00000498187 SNX14Q9Y5W7 946 aa23.76■■□□□ 1.39
NKX2-1-202ENST00000498187 CRYBG1Q9Y4K1 1723 aa23.75■■□□□ 1.39
NKX2-1-202ENST00000498187 OS9Q13438 667 aaPredicted RBP23.75■■□□□ 1.39
NKX2-1-202ENST00000498187 PLEKHO1Q53GL0 409 aaPredicted RBP23.75■■□□□ 1.39
NKX2-1-202ENST00000498187 ESCO1Q5FWF5 840 aa23.75■■□□□ 1.39
NKX2-1-202ENST00000498187 CWC27Q6UX04 472 aaKnown RBP23.74■■□□□ 1.39
NKX2-1-202ENST00000498187 DBF4Q9UBU7 674 aaPredicted RBP23.74■■□□□ 1.39
NKX2-1-202ENST00000498187 PHRF1Q9P1Y6 1649 aaKnown RBP23.74■■□□□ 1.39
NKX2-1-202ENST00000498187 USP42Q9H9J4 1324 aaKnown RBP23.74■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms