RNA–Protein interactions for RNA: ENST00000498043.6

CHRNA4-206, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 5

Gene CHRNA4, Length 2,052 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-206ENST00000498043 CCDC9Q9Y3X0 531 aaKnown RBP22.35■■□□□ 1.17
CHRNA4-206ENST00000498043 PDIA6Q15084 440 aa22.35■■□□□ 1.17
CHRNA4-206ENST00000498043 C8orf37Q96NL8 207 aa22.35■■□□□ 1.17
CHRNA4-206ENST00000498043 HYPKQ9NX55 129 aa22.35■■□□□ 1.17
CHRNA4-206ENST00000498043 USP16Q9Y5T5 823 aa22.35■■□□□ 1.17
CHRNA4-206ENST00000498043 EXOC5O00471 708 aa22.34■■□□□ 1.17
CHRNA4-206ENST00000498043 DNAAF4Q8WXU2 420 aa22.34■■□□□ 1.17
CHRNA4-206ENST00000498043 LRP6O75581 1613 aa22.34■■□□□ 1.17
CHRNA4-206ENST00000498043 SPATA31A5Q5VU36 1347 aa22.34■■□□□ 1.17
CHRNA4-206ENST00000498043 SPATA31A7Q8IWB4 1347 aa22.34■■□□□ 1.17
CHRNA4-206ENST00000498043 DOT1LQ8TEK3 1739 aa22.34■■□□□ 1.17
CHRNA4-206ENST00000498043 MYL6BP14649 208 aa22.34■■□□□ 1.17
CHRNA4-206ENST00000498043 PDE4AP27815 886 aa22.34■■□□□ 1.17
CHRNA4-206ENST00000498043 CEP85Q6P2H3 762 aa22.34■■□□□ 1.17
CHRNA4-206ENST00000498043 THRAP3Q9Y2W1 955 aaKnown RBP22.33■■□□□ 1.17
CHRNA4-206ENST00000498043 ANKRD44Q8N8A2 993 aa22.32■■□□□ 1.16
CHRNA4-206ENST00000498043 PIP4K2AP48426 406 aaPredicted RBP22.32■■□□□ 1.16
CHRNA4-206ENST00000498043 AIMP1Q12904 312 aaKnown RBP22.32■■□□□ 1.16
CHRNA4-206ENST00000498043 SRCIN1Q9C0H9 1055 aa22.32■■□□□ 1.16
CHRNA4-206ENST00000498043 PTCD1O75127 700 aaKnown RBP22.31■■□□□ 1.16
CHRNA4-206ENST00000498043 CDCA7Q9BWT1 371 aaPredicted RBP22.31■■□□□ 1.16
CHRNA4-206ENST00000498043 MAP3K2Q9Y2U5 619 aa22.31■■□□□ 1.16
CHRNA4-206ENST00000498043 GCC1Q96CN9 775 aa22.3■■□□□ 1.16
CHRNA4-206ENST00000498043 NGLY1Q96IV0 654 aa22.3■■□□□ 1.16
CHRNA4-206ENST00000498043 GNAI3P08754 354 aa22.3■■□□□ 1.16
CHRNA4-206ENST00000498043 BEND3Q5T5X7 828 aa22.3■■□□□ 1.16
CHRNA4-206ENST00000498043 RPAP2Q8IXW5 612 aaPredicted RBP22.3■■□□□ 1.16
CHRNA4-206ENST00000498043 BACH2Q9BYV9 841 aa22.3■■□□□ 1.16
CHRNA4-206ENST00000498043 GNAI2P04899 355 aa22.29■■□□□ 1.16
CHRNA4-206ENST00000498043 DDB1Q16531 1140 aa22.29■■□□□ 1.16
CHRNA4-206ENST00000498043 UNC5CLQ8IV45 518 aa22.29■■□□□ 1.16
CHRNA4-206ENST00000498043 PIGBQ92521 554 aa22.29■■□□□ 1.16
CHRNA4-206ENST00000498043 BCL9LQ86UU0 1499 aa22.29■■□□□ 1.16
CHRNA4-206ENST00000498043 NUCB1Q02818 461 aa22.29■■□□□ 1.16
CHRNA4-206ENST00000498043 KSR2Q6VAB6 950 aa22.29■■□□□ 1.16
CHRNA4-206ENST00000498043 SPATA31A6Q5VVP1 1343 aa22.29■■□□□ 1.16
CHRNA4-206ENST00000498043 USP44Q9H0E7 712 aa22.28■■□□□ 1.16
CHRNA4-206ENST00000498043 DDX58O95786 925 aaKnown RBP22.27■■□□□ 1.16
CHRNA4-206ENST00000498043 XAGE3Q8WTP9 111 aa22.27■■□□□ 1.16
CHRNA4-206ENST00000498043 LNPKQ9C0E8 428 aa22.27■■□□□ 1.16
CHRNA4-206ENST00000498043 UBTFL1P0CB47 393 aaPredicted RBP22.27■■□□□ 1.16
CHRNA4-206ENST00000498043 ASAP1Q9ULH1 1129 aa22.27■■□□□ 1.16
CHRNA4-206ENST00000498043 BCL9O00512 1426 aa22.27■■□□□ 1.15
CHRNA4-206ENST00000498043 HSPA1LP34931 641 aa22.26■■□□□ 1.15
CHRNA4-206ENST00000498043 ANKRD45Q5TZF3 282 aa22.26■■□□□ 1.15
CHRNA4-206ENST00000498043 CHD1LQ86WJ1 897 aa22.26■■□□□ 1.15
CHRNA4-206ENST00000498043 SYTL4Q96C24 671 aaPredicted RBP22.26■■□□□ 1.15
CHRNA4-206ENST00000498043 LRRFIP2Q9Y608 721 aaKnown RBP22.26■■□□□ 1.15
CHRNA4-206ENST00000498043 KAT6BQ8WYB5 2073 aa22.26■■□□□ 1.15
CHRNA4-206ENST00000498043 FAM161AQ3B820 660 aa22.26■■□□□ 1.15
CHRNA4-206ENST00000498043 COPS6Q7L5N1 327 aa22.26■■□□□ 1.15
CHRNA4-206ENST00000498043 LRP10Q7Z4F1 713 aa22.26■■□□□ 1.15
CHRNA4-206ENST00000498043 C8orf34Q49A92 452 aa22.25■■□□□ 1.15
CHRNA4-206ENST00000498043 BARGINQ6ZT62 677 aa22.25■■□□□ 1.15
CHRNA4-206ENST00000498043 ARFGEF2Q9Y6D5 1785 aa22.25■■□□□ 1.15
CHRNA4-206ENST00000498043 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.24■■□□□ 1.15
CHRNA4-206ENST00000498043 RIC3Q7Z5B4 369 aa22.24■■□□□ 1.15
CHRNA4-206ENST00000498043 DCTPP1Q9H773 170 aa22.24■■□□□ 1.15
CHRNA4-206ENST00000498043 ATG3Q9NT62 314 aa22.24■■□□□ 1.15
CHRNA4-206ENST00000498043 CWF19L2Q2TBE0 894 aaKnown RBP22.23■■□□□ 1.15
CHRNA4-206ENST00000498043 HMMRO75330 724 aa22.22■■□□□ 1.15
CHRNA4-206ENST00000498043 NBPF7P0C2Y1 421 aaPredicted RBP22.22■■□□□ 1.15
CHRNA4-206ENST00000498043 FAM98CQ17RN3 349 aaKnown RBP22.22■■□□□ 1.15
CHRNA4-206ENST00000498043 ERBB4Q15303 1308 aa22.22■■□□□ 1.15
CHRNA4-206ENST00000498043 NBPF26B4DH59 902 aa22.22■■□□□ 1.15
CHRNA4-206ENST00000498043 VPS72Q15906 364 aa22.22■■□□□ 1.15
CHRNA4-206ENST00000498043 NBPF14Q5TI25 921 aa22.22■■□□□ 1.15
CHRNA4-206ENST00000498043 NBPF10Q6P3W6 841 aaKnown RBP22.22■■□□□ 1.15
CHRNA4-206ENST00000498043 NBPF15Q8N660 670 aa22.22■■□□□ 1.15
CHRNA4-206ENST00000498043 A0A0G2JS52 829 aa22.21■■□□□ 1.15
CHRNA4-206ENST00000498043 FNBP4Q8N3X1 1017 aaPredicted RBP22.21■■□□□ 1.15
CHRNA4-206ENST00000498043 MARCH10Q8NA82 808 aaPredicted RBP22.21■■□□□ 1.15
CHRNA4-206ENST00000498043 ALDH1L1O75891 902 aa22.21■■□□□ 1.15
CHRNA4-206ENST00000498043 PRIM1P49642 420 aaKnown RBP22.21■■□□□ 1.15
CHRNA4-206ENST00000498043 RBM42Q9BTD8 480 aaKnown RBP22.21■■□□□ 1.15
CHRNA4-206ENST00000498043 PNMA6EA0A0J9YXQ4 647 aa22.2■■□□□ 1.14
CHRNA4-206ENST00000498043 A1BGP04217 495 aa22.2■■□□□ 1.14
CHRNA4-206ENST00000498043 LINS1Q8NG48 757 aa22.2■■□□□ 1.14
CHRNA4-206ENST00000498043 USP21Q9UK80 565 aa22.2■■□□□ 1.14
CHRNA4-206ENST00000498043 AFDNP55196 1824 aaKnown RBP22.2■■□□□ 1.14
CHRNA4-206ENST00000498043 MEX3CQ5U5Q3 659 aaKnown RBP22.19■■□□□ 1.14
CHRNA4-206ENST00000498043 NUP188Q5SRE5 1749 aa22.19■■□□□ 1.14
CHRNA4-206ENST00000498043 APBB1O00213 710 aa22.19■■□□□ 1.14
CHRNA4-206ENST00000498043 ANKRD13DQ6ZTN6 518 aa22.19■■□□□ 1.14
CHRNA4-206ENST00000498043 BCL11AQ9H165 835 aa22.19■■□□□ 1.14
CHRNA4-206ENST00000498043 ACSBG1Q96GR2 724 aa22.18■■□□□ 1.14
CHRNA4-206ENST00000498043 C9orf78Q9NZ63 289 aaPredicted RBP22.18■■□□□ 1.14
CHRNA4-206ENST00000498043 NEXNQ0ZGT2 675 aa22.18■■□□□ 1.14
CHRNA4-206ENST00000498043 DNAJC10Q8IXB1 793 aa22.18■■□□□ 1.14
CHRNA4-206ENST00000498043 MYD88Q99836 296 aa22.18■■□□□ 1.14
CHRNA4-206ENST00000498043 IGKV5-2P06315 115 aa22.17■■□□□ 1.14
CHRNA4-206ENST00000498043 ATP8B2P98198 1209 aa22.17■■□□□ 1.14
CHRNA4-206ENST00000498043 MYT1Q01538 1121 aa22.16■■□□□ 1.14
CHRNA4-206ENST00000498043 VSIG10Q8N0Z9 540 aa22.16■■□□□ 1.14
CHRNA4-206ENST00000498043 METTL22Q9BUU2 404 aaPredicted RBP22.16■■□□□ 1.14
CHRNA4-206ENST00000498043 TJP1Q07157 1748 aa22.16■■□□□ 1.14
CHRNA4-206ENST00000498043 ZBTB47Q9UFB7 747 aaPredicted RBP22.15■■□□□ 1.14
CHRNA4-206ENST00000498043 EXOC6BQ9Y2D4 811 aa22.15■■□□□ 1.14
CHRNA4-206ENST00000498043 NEURL1BA8MQ27 555 aa22.15■■□□□ 1.14
CHRNA4-206ENST00000498043 THSD7AQ9UPZ6 1657 aa22.14■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms