RNA–Protein interactions for RNA: ENST00000498034.5

LMBR1-219, Transcript of limb development membrane protein 1, humanhuman

TSL 3

Gene LMBR1, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-219ENST00000498034 COL15A1P39059 1388 aa27.21■■□□□ 1.95
LMBR1-219ENST00000498034 ATP10DQ9P241 1426 aa27.2■■□□□ 1.94
LMBR1-219ENST00000498034 BCS1LQ9Y276 419 aa27.2■■□□□ 1.94
LMBR1-219ENST00000498034 CANXP27824 592 aaKnown RBP27.19■■□□□ 1.94
LMBR1-219ENST00000498034 TM4SF1P30408 202 aa27.19■■□□□ 1.94
LMBR1-219ENST00000498034 C1QTNF8P60827 252 aa27.19■■□□□ 1.94
LMBR1-219ENST00000498034 CEMIPQ8WUJ3 1361 aa27.19■■□□□ 1.94
LMBR1-219ENST00000498034 GIGYF1O75420 1035 aaPredicted RBP27.18■■□□□ 1.94
LMBR1-219ENST00000498034 NARFQ9UHQ1 456 aa27.18■■□□□ 1.94
LMBR1-219ENST00000498034 HEG1Q9ULI3 1381 aa27.18■■□□□ 1.94
LMBR1-219ENST00000498034 POLRMTO00411 1230 aaKnown RBP27.17■■□□□ 1.94
LMBR1-219ENST00000498034 FCHSD2O94868 740 aa27.17■■□□□ 1.94
LMBR1-219ENST00000498034 STARD3NLO95772 234 aa27.16■■□□□ 1.94
LMBR1-219ENST00000498034 KCNA3P22001 575 aa27.16■■□□□ 1.94
LMBR1-219ENST00000498034 ADCY9O60503 1353 aa27.15■■□□□ 1.94
LMBR1-219ENST00000498034 KCNQ3O43525 872 aa27.15■■□□□ 1.94
LMBR1-219ENST00000498034 BCL2L12Q9HB09 334 aa27.15■■□□□ 1.94
LMBR1-219ENST00000498034 BTBD11A6QL63 1104 aa27.14■■□□□ 1.94
LMBR1-219ENST00000498034 BRCA1P38398 1863 aaKnown RBP27.14■■□□□ 1.94
LMBR1-219ENST00000498034 NFIXQ14938 502 aa27.13■■□□□ 1.93
LMBR1-219ENST00000498034 FMNL2Q96PY5 1086 aa27.13■■□□□ 1.93
LMBR1-219ENST00000498034 TEX13AQ9BXU3 409 aaPredicted RBP27.13■■□□□ 1.93
LMBR1-219ENST00000498034 EIF5P55010 431 aaKnown RBP27.12■■□□□ 1.93
LMBR1-219ENST00000498034 MCM10Q7L590 875 aa27.12■■□□□ 1.93
LMBR1-219ENST00000498034 ZNF526Q8TF50 670 aaPredicted RBP27.11■■□□□ 1.93
LMBR1-219ENST00000498034 RTF1Q92541 710 aaKnown RBP27.11■■□□□ 1.93
LMBR1-219ENST00000498034 CHRNA5P30532 468 aa27.1■■□□□ 1.93
LMBR1-219ENST00000498034 DCTN1Q14203 1278 aa27.1■■□□□ 1.93
LMBR1-219ENST00000498034 ARHGAP27Q6ZUM4 889 aa27.1■■□□□ 1.93
LMBR1-219ENST00000498034 GPBP1L1Q9HC44 474 aaPredicted RBP27.1■■□□□ 1.93
LMBR1-219ENST00000498034 PIM2Q9P1W9 311 aa27.1■■□□□ 1.93
LMBR1-219ENST00000498034 AFDNP55196 1824 aaKnown RBP27.09■■□□□ 1.93
LMBR1-219ENST00000498034 ZNF330Q9Y3S2 320 aaPredicted RBP27.09■■□□□ 1.93
LMBR1-219ENST00000498034 A0A087WZG4 1122 aa27.08■■□□□ 1.93
LMBR1-219ENST00000498034 A1BGP04217 495 aa27.08■■□□□ 1.93
LMBR1-219ENST00000498034 SERPINB2P05120 415 aa27.07■■□□□ 1.92
LMBR1-219ENST00000498034 SENP3-EIF4A1A0A087X0R7 540 aa27.06■■□□□ 1.92
LMBR1-219ENST00000498034 BICDL1Q6ZP65 573 aa27.06■■□□□ 1.92
LMBR1-219ENST00000498034 TBC1D2BQ9UPU7 963 aa27.06■■□□□ 1.92
LMBR1-219ENST00000498034 NRXN2Q9P2S2 1712 aa27.06■■□□□ 1.92
LMBR1-219ENST00000498034 ARFGEF1Q9Y6D6 1849 aa27.05■■□□□ 1.92
LMBR1-219ENST00000498034 IL6STP40189 918 aaPredicted RBP27.05■■□□□ 1.92
LMBR1-219ENST00000498034 DALRD3Q5D0E6 543 aaKnown RBP27.05■■□□□ 1.92
LMBR1-219ENST00000498034 USP16Q9Y5T5 823 aa27.05■■□□□ 1.92
LMBR1-219ENST00000498034 PRAMEF22A3QJZ6 481 aa27.04■■□□□ 1.92
LMBR1-219ENST00000498034 HTATSF1O43719 755 aaKnown RBP27.04■■□□□ 1.92
LMBR1-219ENST00000498034 TBC1D9BQ66K14 1250 aa27.03■■□□□ 1.92
LMBR1-219ENST00000498034 PIP4K2AP48426 406 aaPredicted RBP27.01■■□□□ 1.91
LMBR1-219ENST00000498034 SCN7AQ01118 1682 aa27.01■■□□□ 1.91
LMBR1-219ENST00000498034 NEFMP07197 916 aa27■■□□□ 1.91
LMBR1-219ENST00000498034 SNRPA1P09661 255 aaKnown RBP27■■□□□ 1.91
LMBR1-219ENST00000498034 NPM2Q86SE8 214 aaKnown RBP27■■□□□ 1.91
LMBR1-219ENST00000498034 PLEKHF1Q96S99 279 aa27■■□□□ 1.91
LMBR1-219ENST00000498034 DLG5Q8TDM6 1919 aa27■■□□□ 1.91
LMBR1-219ENST00000498034 CARMIL3Q8ND23 1372 aa26.99■■□□□ 1.91
LMBR1-219ENST00000498034 TAF7Q15545 349 aaPredicted RBP26.99■■□□□ 1.91
LMBR1-219ENST00000498034 MIS18AQ9NYP9 233 aa26.99■■□□□ 1.91
LMBR1-219ENST00000498034 CAMTA2O94983 1202 aa26.98■■□□□ 1.91
LMBR1-219ENST00000498034 C9orf131Q5VYM1 1079 aa26.96■■□□□ 1.91
LMBR1-219ENST00000498034 DZIP3Q86Y13 1208 aaKnown RBP26.96■■□□□ 1.91
LMBR1-219ENST00000498034 DDX10Q13206 875 aaKnown RBP26.95■■□□□ 1.9
LMBR1-219ENST00000498034 C2CD5Q86YS7 1000 aa26.95■■□□□ 1.9
LMBR1-219ENST00000498034 CCDC24Q8N4L8 307 aa26.95■■□□□ 1.9
LMBR1-219ENST00000498034 NFE2L2Q16236 605 aa26.94■■□□□ 1.9
LMBR1-219ENST00000498034 DLEC1Q9Y238 1755 aa26.94■■□□□ 1.9
LMBR1-219ENST00000498034 KIF3CO14782 793 aa26.93■■□□□ 1.9
LMBR1-219ENST00000498034 RALBP1Q15311 655 aa26.93■■□□□ 1.9
LMBR1-219ENST00000498034 BCORQ6W2J9 1755 aa26.93■■□□□ 1.9
LMBR1-219ENST00000498034 H0YIN7 160 aa26.92■■□□□ 1.9
LMBR1-219ENST00000498034 PRR5LQ6MZQ0 368 aa26.92■■□□□ 1.9
LMBR1-219ENST00000498034 SETDB2Q96T68 719 aa26.92■■□□□ 1.9
LMBR1-219ENST00000498034 THUMPD2Q9BTF0 503 aaKnown RBP26.92■■□□□ 1.9
LMBR1-219ENST00000498034 ANKRD31Q8N7Z5 1873 aa26.91■■□□□ 1.9
LMBR1-219ENST00000498034 NBPF26B4DH59 902 aa26.91■■□□□ 1.9
LMBR1-219ENST00000498034 NBPF10Q6P3W6 841 aaKnown RBP26.91■■□□□ 1.9
LMBR1-219ENST00000498034 NBPF15Q8N660 670 aa26.91■■□□□ 1.9
LMBR1-219ENST00000498034 TTLL6Q8N841 843 aa26.91■■□□□ 1.9
LMBR1-219ENST00000498034 PNNQ9H307 717 aaKnown RBP26.91■■□□□ 1.9
LMBR1-219ENST00000498034 MAPK8IP3Q9UPT6 1336 aa26.9■■□□□ 1.9
LMBR1-219ENST00000498034 RNF181Q9P0P0 153 aa26.9■■□□□ 1.9
LMBR1-219ENST00000498034 PNISRQ8TF01 805 aaKnown RBP26.89■■□□□ 1.9
LMBR1-219ENST00000498034 BRIP1Q9BX63 1249 aa26.89■■□□□ 1.9
LMBR1-219ENST00000498034 SBF1O95248 1867 aa26.89■■□□□ 1.89
LMBR1-219ENST00000498034 KDM3BQ7LBC6 1761 aa26.89■■□□□ 1.89
LMBR1-219ENST00000498034 RASSF7Q02833 373 aa26.88■■□□□ 1.89
LMBR1-219ENST00000498034 PDE6BP35913 854 aa26.87■■□□□ 1.89
LMBR1-219ENST00000498034 CNBD1Q8NA66 436 aa26.87■■□□□ 1.89
LMBR1-219ENST00000498034 ZNF622Q969S3 477 aaKnown RBP eCLIP26.87■■□□□ 1.892e-8■□□□□ 8.9
LMBR1-219ENST00000498034 NMRK2Q9NPI5 230 aa26.87■■□□□ 1.89
LMBR1-219ENST00000498034 NPHP1O15259 732 aa26.86■■□□□ 1.89
LMBR1-219ENST00000498034 CLEC4GQ6UXB4 293 aa26.86■■□□□ 1.89
LMBR1-219ENST00000498034 LAMB4A4D0S4 1761 aa26.85■■□□□ 1.89
LMBR1-219ENST00000498034 EIF4A1P60842 406 aaKnown RBP26.85■■□□□ 1.89
LMBR1-219ENST00000498034 COL11A2P13942 1736 aaPredicted RBP26.85■■□□□ 1.89
LMBR1-219ENST00000498034 PDZRN3Q9UPQ7 1066 aa26.84■■□□□ 1.89
LMBR1-219ENST00000498034 ZNF652Q9Y2D9 606 aa26.84■■□□□ 1.89
LMBR1-219ENST00000498034 ST5P78524 1137 aa26.83■■□□□ 1.89
LMBR1-219ENST00000498034 MYBBP1AQ9BQG0 1328 aaKnown RBP26.83■■□□□ 1.89
LMBR1-219ENST00000498034 PRELPP51888 382 aa26.82■■□□□ 1.88
LMBR1-219ENST00000498034 RIPK4P57078 832 aa26.82■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms