RNA–Protein interactions for RNA: ENST00000497658.5

PHC3-217, Transcript of polyhomeotic homolog 3, humanhuman

TSL 1 (best) BASIC

Gene PHC3, Length 2,087 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-217ENST00000497658 ZFYVE9O95405 1425 aa6.94□□□□□ -1.3
PHC3-217ENST00000497658 LRSAM1Q6UWE0 723 aa6.94□□□□□ -1.3
PHC3-217ENST00000497658 SMAP1Q8IYB5 467 aaPredicted RBP6.94□□□□□ -1.3
PHC3-217ENST00000497658 USP26Q9BXU7 913 aa6.94□□□□□ -1.3
PHC3-217ENST00000497658 TERF2IPQ9NYB0 399 aa6.94□□□□□ -1.3
PHC3-217ENST00000497658 R3HCC1Q9Y3T6 440 aaKnown RBP6.94□□□□□ -1.3
PHC3-217ENST00000497658 ABCC4O15439 1325 aa6.94□□□□□ -1.3
PHC3-217ENST00000497658 CDC42BPGQ6DT37 1551 aa6.93□□□□□ -1.3
PHC3-217ENST00000497658 ABCA9Q8IUA7 1624 aa6.93□□□□□ -1.3
PHC3-217ENST00000497658 SASS6Q6UVJ0 657 aa6.93□□□□□ -1.3
PHC3-217ENST00000497658 API5Q9BZZ5 524 aaKnown RBP6.93□□□□□ -1.3
PHC3-217ENST00000497658 IL21Q9HBE4 155 aa6.93□□□□□ -1.3
PHC3-217ENST00000497658 TULP4Q9NRJ4 1543 aa6.93□□□□□ -1.3
PHC3-217ENST00000497658 ATAD2Q6PL18 1390 aa6.93□□□□□ -1.3
PHC3-217ENST00000497658 UQCRHLA0A096LP55 91 aa6.92□□□□□ -1.3
PHC3-217ENST00000497658 VAMP4O75379 141 aa6.92□□□□□ -1.3
PHC3-217ENST00000497658 REC8O95072 547 aa6.92□□□□□ -1.3
PHC3-217ENST00000497658 UQCRHP07919 91 aa6.92□□□□□ -1.3
PHC3-217ENST00000497658 NCLP19338 710 aaKnown RBP6.92□□□□□ -1.3
PHC3-217ENST00000497658 PRIM1P49642 420 aaKnown RBP6.92□□□□□ -1.3
PHC3-217ENST00000497658 MCM2P49736 904 aa6.92□□□□□ -1.3
PHC3-217ENST00000497658 HAP1P54257 671 aaPredicted RBP6.92□□□□□ -1.3
PHC3-217ENST00000497658 GNAI1P63096 354 aa6.92□□□□□ -1.3
PHC3-217ENST00000497658 MTRQ99707 1265 aa6.92□□□□□ -1.3
PHC3-217ENST00000497658 RBSNQ9H1K0 784 aa6.92□□□□□ -1.3
PHC3-217ENST00000497658 DCTPP1Q9H773 170 aa6.92□□□□□ -1.3
PHC3-217ENST00000497658 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.92□□□□□ -1.3
PHC3-217ENST00000497658 FAM13BQ9NYF5 915 aa6.92□□□□□ -1.3
PHC3-217ENST00000497658 A0A1W2PP64 1363 aa6.92□□□□□ -1.3
PHC3-217ENST00000497658 GLI2P10070 1586 aa6.92□□□□□ -1.3
PHC3-217ENST00000497658 TTC22Q5TAA0 569 aa6.92□□□□□ -1.3
PHC3-217ENST00000497658 PLEKHM2Q8IWE5 1019 aa6.92□□□□□ -1.3
PHC3-217ENST00000497658 SIRT2Q8IXJ6 389 aa6.92□□□□□ -1.3
PHC3-217ENST00000497658 SYAP1Q96A49 352 aaPredicted RBP6.92□□□□□ -1.3
PHC3-217ENST00000497658 IFT57Q9NWB7 429 aa6.92□□□□□ -1.3
PHC3-217ENST00000497658 ANKRD26Q9UPS8 1709 aa6.92□□□□□ -1.3
PHC3-217ENST00000497658 FYB1O15117 783 aa6.91□□□□□ -1.3
PHC3-217ENST00000497658 PRPF40AO75400 957 aaKnown RBP6.91□□□□□ -1.3
PHC3-217ENST00000497658 GSPT1P15170 499 aaKnown RBP6.91□□□□□ -1.3
PHC3-217ENST00000497658 HMGN5P82970 282 aaKnown RBP6.91□□□□□ -1.3
PHC3-217ENST00000497658 PACS2Q86VP3 889 aa6.91□□□□□ -1.3
PHC3-217ENST00000497658 RPAP2Q8IXW5 612 aaPredicted RBP6.91□□□□□ -1.3
PHC3-217ENST00000497658 FAM184AQ8NB25 1140 aa6.91□□□□□ -1.3
PHC3-217ENST00000497658 PRIMPOLQ96LW4 560 aa6.91□□□□□ -1.3
PHC3-217ENST00000497658 TSKSQ9UJT2 592 aa6.91□□□□□ -1.3
PHC3-217ENST00000497658 PRDM4Q9UKN5 801 aa6.91□□□□□ -1.3
PHC3-217ENST00000497658 ARHGEF28Q8N1W1 1705 aaKnown RBP6.91□□□□□ -1.3
PHC3-217ENST00000497658 GTPBP6O43824 516 aaPredicted RBP6.91□□□□□ -1.3
PHC3-217ENST00000497658 LMOD3Q0VAK6 560 aa6.91□□□□□ -1.3
PHC3-217ENST00000497658 TMEM132EQ6IEE7 984 aa6.91□□□□□ -1.3
PHC3-217ENST00000497658 GPT2Q8TD30 523 aa6.91□□□□□ -1.3
PHC3-217ENST00000497658 RBM33Q96EV2 1170 aaKnown RBP6.91□□□□□ -1.3
PHC3-217ENST00000497658 FAM135BQ49AJ0 1406 aa6.91□□□□□ -1.3
PHC3-217ENST00000497658 RBM10P98175 930 aaKnown RBP6.9□□□□□ -1.3
PHC3-217ENST00000497658 XPCQ01831 940 aaPredicted RBP6.9□□□□□ -1.3
PHC3-217ENST00000497658 KIAA2012Q0VF49 1180 aa6.9□□□□□ -1.3
PHC3-217ENST00000497658 NFE2L2Q16236 605 aa6.9□□□□□ -1.3
PHC3-217ENST00000497658 UVSSAQ2YD98 709 aa6.9□□□□□ -1.3
PHC3-217ENST00000497658 INTS4Q96HW7 963 aaKnown RBP6.9□□□□□ -1.3
PHC3-217ENST00000497658 NPATQ14207 1427 aa6.9□□□□□ -1.3
PHC3-217ENST00000497658 CHD1O14646 1710 aa6.9□□□□□ -1.31
PHC3-217ENST00000497658 ZNF853P0CG23 659 aa6.89□□□□□ -1.31
PHC3-217ENST00000497658 UTP14CQ5TAP6 766 aaKnown RBP6.89□□□□□ -1.31
PHC3-217ENST00000497658 GGNBP2Q9H3C7 697 aa6.89□□□□□ -1.31
PHC3-217ENST00000497658 GTF2F1P35269 517 aaKnown RBP eCLIP6.89□□□□□ -1.31
PHC3-217ENST00000497658 SRPK2P78362 688 aaKnown RBP6.89□□□□□ -1.31
PHC3-217ENST00000497658 SAMD7Q7Z3H4 446 aa6.89□□□□□ -1.31
PHC3-217ENST00000497658 HDGFL2Q7Z4V5 671 aaPredicted RBP6.89□□□□□ -1.31
PHC3-217ENST00000497658 MYRIPQ8NFW9 859 aa6.89□□□□□ -1.31
PHC3-217ENST00000497658 ZNF516Q92618 1163 aa6.89□□□□□ -1.31
PHC3-217ENST00000497658 CCDC94Q9BW85 323 aaPredicted RBP6.89□□□□□ -1.31
PHC3-217ENST00000497658 TMEM63CQ9P1W3 806 aa6.89□□□□□ -1.31
PHC3-217ENST00000497658 ZDHHC9Q9Y397 364 aa6.89□□□□□ -1.31
PHC3-217ENST00000497658 FRMPD1Q5SYB0 1578 aa6.88□□□□□ -1.31
PHC3-217ENST00000497658 LRRC7Q96NW7 1537 aa6.88□□□□□ -1.31
PHC3-217ENST00000497658 SYCE3A1L190 88 aa6.88□□□□□ -1.31
PHC3-217ENST00000497658 ERC2O15083 957 aa6.88□□□□□ -1.31
PHC3-217ENST00000497658 EPB41L2O43491 1005 aaKnown RBP6.88□□□□□ -1.31
PHC3-217ENST00000497658 LETM1O95202 739 aaPredicted RBP6.88□□□□□ -1.31
PHC3-217ENST00000497658 PRKAR2BP31323 418 aa6.88□□□□□ -1.31
PHC3-217ENST00000497658 ANAPC15P60006 121 aa6.88□□□□□ -1.31
PHC3-217ENST00000497658 TWISTNBQ3B726 338 aaPredicted RBP6.88□□□□□ -1.31
PHC3-217ENST00000497658 ANKRD44Q8N8A2 993 aa6.88□□□□□ -1.31
PHC3-217ENST00000497658 TSPY26PQ9H489 355 aa6.88□□□□□ -1.31
PHC3-217ENST00000497658 OSBPL3Q9H4L5 887 aa6.88□□□□□ -1.31
PHC3-217ENST00000497658 ERCC6L2Q5T890 1561 aa6.88□□□□□ -1.31
PHC3-217ENST00000497658 KIDINS220Q9ULH0 1771 aa6.88□□□□□ -1.31
PHC3-217ENST00000497658 BRD1O95696 1058 aa6.88□□□□□ -1.31
PHC3-217ENST00000497658 SDSP20132 328 aa6.88□□□□□ -1.31
PHC3-217ENST00000497658 PKP1Q13835 747 aa6.88□□□□□ -1.31
PHC3-217ENST00000497658 C1orf115Q9H7X2 142 aa6.88□□□□□ -1.31
PHC3-217ENST00000497658 PIK3C2BO00750 1634 aa6.87□□□□□ -1.31
PHC3-217ENST00000497658 CLTCQ00610 1675 aaKnown RBP6.87□□□□□ -1.31
PHC3-217ENST00000497658 PTMAP06454 111 aaKnown RBP6.87□□□□□ -1.31
PHC3-217ENST00000497658 CAMK2BQ13554 666 aa6.87□□□□□ -1.31
PHC3-217ENST00000497658 CUL4AQ13619 759 aa6.87□□□□□ -1.31
PHC3-217ENST00000497658 ZGPATQ8N5A5 531 aaKnown RBP6.87□□□□□ -1.31
PHC3-217ENST00000497658 PIBF1Q8WXW3 757 aa6.87□□□□□ -1.31
PHC3-217ENST00000497658 IL17RAQ96F46 866 aa6.87□□□□□ -1.31
PHC3-217ENST00000497658 MBIPQ9NS73 344 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms