RNA–Protein interactions for RNA: ENST00000496157.5

STAG3-217, Transcript of stromal antigen 3, humanhuman

TSL 1 (best)

Gene STAG3, Length 3,585 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STAG3-217ENST00000496157 USP16Q9Y5T5 823 aa12.63□□□□□ -0.39
STAG3-217ENST00000496157 VIRMAQ69YN4 1812 aaKnown RBP12.63□□□□□ -0.39
STAG3-217ENST00000496157 KDM2BQ8NHM5 1336 aa12.62□□□□□ -0.39
STAG3-217ENST00000496157 COG6Q9Y2V7 657 aa12.62□□□□□ -0.39
STAG3-217ENST00000496157 BCL11BQ9C0K0 894 aaPredicted RBP12.61□□□□□ -0.39
STAG3-217ENST00000496157 TOGARAM1Q9Y4F4 1720 aa12.61□□□□□ -0.39
STAG3-217ENST00000496157 FRAT2O75474 233 aaPredicted RBP12.61□□□□□ -0.39
STAG3-217ENST00000496157 SNRPA1P09661 255 aaKnown RBP12.61□□□□□ -0.39
STAG3-217ENST00000496157 C8orf34Q49A92 452 aa12.61□□□□□ -0.39
STAG3-217ENST00000496157 ADAMTS7Q9UKP4 1686 aa12.61□□□□□ -0.39
STAG3-217ENST00000496157 RARSP54136 660 aaKnown RBP12.6□□□□□ -0.39
STAG3-217ENST00000496157 HDGFL1Q5TGJ6 251 aa12.6□□□□□ -0.39
STAG3-217ENST00000496157 PANK1Q8TE04 598 aa12.6□□□□□ -0.39
STAG3-217ENST00000496157 SSH1Q8WYL5 1049 aa12.6□□□□□ -0.39
STAG3-217ENST00000496157 ARXQ96QS3 562 aa12.6□□□□□ -0.39
STAG3-217ENST00000496157 PIP4K2AP48426 406 aaPredicted RBP12.6□□□□□ -0.39
STAG3-217ENST00000496157 SLC4A9Q96Q91 983 aa12.6□□□□□ -0.39
STAG3-217ENST00000496157 ATP6V1AP38606 617 aa12.6□□□□□ -0.39
STAG3-217ENST00000496157 SLKQ9H2G2 1235 aaPredicted RBP12.6□□□□□ -0.39
STAG3-217ENST00000496157 MRC1P22897 1456 aa12.6□□□□□ -0.39
STAG3-217ENST00000496157 ITGB4P16144 1822 aa12.6□□□□□ -0.39
STAG3-217ENST00000496157 DOT1LQ8TEK3 1739 aa12.6□□□□□ -0.39
STAG3-217ENST00000496157 APBA3O96018 575 aa12.59□□□□□ -0.39
STAG3-217ENST00000496157 ANXA1P04083 346 aa12.59□□□□□ -0.39
STAG3-217ENST00000496157 DNAJC10Q8IXB1 793 aa12.59□□□□□ -0.39
STAG3-217ENST00000496157 SMARCC1Q92922 1105 aaPredicted RBP12.59□□□□□ -0.39
STAG3-217ENST00000496157 SMC4Q9NTJ3 1288 aa12.59□□□□□ -0.39
STAG3-217ENST00000496157 LOC102724428A0A0B4J2F2 783 aa12.59□□□□□ -0.39
STAG3-217ENST00000496157 SIK1P57059 783 aa12.59□□□□□ -0.39
STAG3-217ENST00000496157 SLC4A2P04920 1241 aa12.59□□□□□ -0.39
STAG3-217ENST00000496157 PALLDQ8WX93 1383 aa12.58□□□□□ -0.4
STAG3-217ENST00000496157 HEG1Q9ULI3 1381 aa12.58□□□□□ -0.4
STAG3-217ENST00000496157 CT47B1P0C2W7 299 aaPredicted RBP12.58□□□□□ -0.4
STAG3-217ENST00000496157 CCDC30Q5VVM6 783 aa12.58□□□□□ -0.4
STAG3-217ENST00000496157 A1BGP04217 495 aa12.58□□□□□ -0.4
STAG3-217ENST00000496157 CLUAP1Q96AJ1 413 aa12.58□□□□□ -0.4
STAG3-217ENST00000496157 SIPA1L3O60292 1781 aaPredicted RBP12.57□□□□□ -0.4
STAG3-217ENST00000496157 MYL6BP14649 208 aa12.57□□□□□ -0.4
STAG3-217ENST00000496157 IGHDP01880 384 aa12.57□□□□□ -0.4
STAG3-217ENST00000496157 STK31Q9BXU1 1019 aa12.57□□□□□ -0.4
STAG3-217ENST00000496157 CHPF2Q9P2E5 772 aa12.57□□□□□ -0.4
STAG3-217ENST00000496157 UPF2Q9HAU5 1272 aaKnown RBP12.56□□□□□ -0.4
STAG3-217ENST00000496157 ZNF330Q9Y3S2 320 aaPredicted RBP12.56□□□□□ -0.4
STAG3-217ENST00000496157 ITPK1Q13572 414 aa12.56□□□□□ -0.4
STAG3-217ENST00000496157 BECN1Q14457 450 aa12.55□□□□□ -0.4
STAG3-217ENST00000496157 PROSER3Q2NL68 480 aa12.55□□□□□ -0.4
STAG3-217ENST00000496157 G2E3Q7L622 706 aa12.55□□□□□ -0.4
STAG3-217ENST00000496157 CCNL1Q9UK58 526 aaPredicted RBP12.55□□□□□ -0.4
STAG3-217ENST00000496157 NOB1Q9ULX3 412 aaKnown RBP12.55□□□□□ -0.4
STAG3-217ENST00000496157 STARD3NLO95772 234 aa12.55□□□□□ -0.4
STAG3-217ENST00000496157 HOXB7P09629 217 aa12.55□□□□□ -0.4
STAG3-217ENST00000496157 VSIG10Q8N0Z9 540 aa12.55□□□□□ -0.4
STAG3-217ENST00000496157 MRPL50Q8N5N7 158 aaKnown RBP12.55□□□□□ -0.4
STAG3-217ENST00000496157 SPRYD3Q8NCJ5 442 aa12.55□□□□□ -0.4
STAG3-217ENST00000496157 PHAXQ9H814 394 aaKnown RBP12.55□□□□□ -0.4
STAG3-217ENST00000496157 KDM3BQ7LBC6 1761 aa12.55□□□□□ -0.4
STAG3-217ENST00000496157 AIMP1Q12904 312 aaKnown RBP12.55□□□□□ -0.4
STAG3-217ENST00000496157 ALDH1L2Q3SY69 923 aa12.55□□□□□ -0.4
STAG3-217ENST00000496157 ZNF428Q96B54 188 aa12.55□□□□□ -0.4
STAG3-217ENST00000496157 TEX13AQ9BXU3 409 aaPredicted RBP12.55□□□□□ -0.4
STAG3-217ENST00000496157 DBF4Q9UBU7 674 aaPredicted RBP12.54□□□□□ -0.4
STAG3-217ENST00000496157 KCPQ6ZWJ8 1503 aa12.54□□□□□ -0.4
STAG3-217ENST00000496157 CYP19A1P11511 503 aaPredicted RBP12.54□□□□□ -0.4
STAG3-217ENST00000496157 SF3B2Q13435 895 aaKnown RBP12.53□□□□□ -0.4
STAG3-217ENST00000496157 PROM2Q8N271 834 aa12.53□□□□□ -0.4
STAG3-217ENST00000496157 LRRC4BQ9NT99 713 aa12.53□□□□□ -0.4
STAG3-217ENST00000496157 TNNQ9UQP3 1299 aa12.53□□□□□ -0.4
STAG3-217ENST00000496157 EN1Q05925 392 aaPredicted RBP12.53□□□□□ -0.4
STAG3-217ENST00000496157 PDIA6Q15084 440 aa12.53□□□□□ -0.4
STAG3-217ENST00000496157 SBF2Q86WG5 1849 aa12.53□□□□□ -0.4
STAG3-217ENST00000496157 SOS1Q07889 1333 aaPredicted RBP12.53□□□□□ -0.4
STAG3-217ENST00000496157 NBPF26B4DH59 902 aa12.53□□□□□ -0.4
STAG3-217ENST00000496157 NBPF14Q5TI25 921 aa12.53□□□□□ -0.4
STAG3-217ENST00000496157 NBPF10Q6P3W6 841 aaKnown RBP12.53□□□□□ -0.4
STAG3-217ENST00000496157 SMIM5Q71RC9 77 aa12.53□□□□□ -0.4
STAG3-217ENST00000496157 NBPF15Q8N660 670 aa12.53□□□□□ -0.4
STAG3-217ENST00000496157 CHMP4AQ9BY43 222 aa12.53□□□□□ -0.4
STAG3-217ENST00000496157 TXNRD1Q16881 649 aa12.52□□□□□ -0.4
STAG3-217ENST00000496157 DEFB132Q7Z7B7 95 aa12.52□□□□□ -0.4
STAG3-217ENST00000496157 LINC00116Q8NCU8 138 aa12.52□□□□□ -0.4
STAG3-217ENST00000496157 DDX21Q9NR30 783 aaKnown RBP eCLIP12.52□□□□□ -0.4
STAG3-217ENST00000496157 BTAF1O14981 1849 aa12.52□□□□□ -0.41
STAG3-217ENST00000496157 CRKLP46109 303 aaKnown RBP12.51□□□□□ -0.41
STAG3-217ENST00000496157 ZBTB1Q9Y2K1 713 aa12.51□□□□□ -0.41
STAG3-217ENST00000496157 PLSCR1O15162 318 aa12.51□□□□□ -0.41
STAG3-217ENST00000496157 SEC24BO95487 1268 aa12.51□□□□□ -0.41
STAG3-217ENST00000496157 COPS6Q7L5N1 327 aa12.51□□□□□ -0.41
STAG3-217ENST00000496157 FKBP5Q13451 457 aaPredicted RBP12.51□□□□□ -0.41
STAG3-217ENST00000496157 NHSQ6T4R5 1651 aa12.51□□□□□ -0.41
STAG3-217ENST00000496157 FLIIQ13045 1269 aa12.5□□□□□ -0.41
STAG3-217ENST00000496157 EZH2Q15910 746 aaKnown RBP12.5□□□□□ -0.41
STAG3-217ENST00000496157 F6X3S4 739 aa12.5□□□□□ -0.41
STAG3-217ENST00000496157 ZKSCAN2Q63HK3 967 aa12.5□□□□□ -0.41
STAG3-217ENST00000496157 INTS5Q6P9B9 1019 aaKnown RBP12.5□□□□□ -0.41
STAG3-217ENST00000496157 XAGE3Q8WTP9 111 aa12.5□□□□□ -0.41
STAG3-217ENST00000496157 HYPKQ9NX55 129 aa12.5□□□□□ -0.41
STAG3-217ENST00000496157 IPO8O15397 1037 aaKnown RBP12.5□□□□□ -0.41
STAG3-217ENST00000496157 PDE3AQ14432 1141 aa12.49□□□□□ -0.41
STAG3-217ENST00000496157 ILDR2Q71H61 639 aa12.49□□□□□ -0.41
STAG3-217ENST00000496157 CCDC87Q9NVE4 849 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms