RNA–Protein interactions for RNA: ENST00000495835.1

HLA-C-209, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,073 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-209ENST00000495835 ZBTB1Q9Y2K1 713 aa32.19■■■□□ 2.74
HLA-C-209ENST00000495835 SRP68Q9UHB9 627 aaKnown RBP32.18■■■□□ 2.74
HLA-C-209ENST00000495835 NARFQ9UHQ1 456 aa32.18■■■□□ 2.74
HLA-C-209ENST00000495835 COL15A1P39059 1388 aa32.18■■■□□ 2.74
HLA-C-209ENST00000495835 C10orf71Q711Q0 1435 aa32.17■■■□□ 2.74
HLA-C-209ENST00000495835 FKBP8Q14318 412 aa32.17■■■□□ 2.74
HLA-C-209ENST00000495835 PLEKHF1Q96S99 279 aa32.16■■■□□ 2.74
HLA-C-209ENST00000495835 TM4SF1P30408 202 aa32.15■■■□□ 2.74
HLA-C-209ENST00000495835 A0A087WZG4 1122 aa32.14■■■□□ 2.74
HLA-C-209ENST00000495835 EIF5P55010 431 aaKnown RBP32.14■■■□□ 2.74
HLA-C-209ENST00000495835 USPL1Q5W0Q7 1092 aa32.14■■■□□ 2.74
HLA-C-209ENST00000495835 MCM10Q7L590 875 aa32.14■■■□□ 2.74
HLA-C-209ENST00000495835 ZNF784Q8NCA9 323 aaPredicted RBP32.14■■■□□ 2.74
HLA-C-209ENST00000495835 KIAA1551Q9HCM1 1747 aa32.12■■■□□ 2.73
HLA-C-209ENST00000495835 PXDNLA1KZ92 1463 aa32.11■■■□□ 2.73
HLA-C-209ENST00000495835 CANXP27824 592 aaKnown RBP32.11■■■□□ 2.73
HLA-C-209ENST00000495835 TAF7Q15545 349 aaPredicted RBP32.11■■■□□ 2.73
HLA-C-209ENST00000495835 DLG5Q8TDM6 1919 aa32.1■■■□□ 2.73
HLA-C-209ENST00000495835 MYBBP1AQ9BQG0 1328 aaKnown RBP32.1■■■□□ 2.73
HLA-C-209ENST00000495835 IL6STP40189 918 aaPredicted RBP32.1■■■□□ 2.73
HLA-C-209ENST00000495835 POLRMTO00411 1230 aaKnown RBP32.08■■■□□ 2.73
HLA-C-209ENST00000495835 KCNQ3O43525 872 aa32.08■■■□□ 2.73
HLA-C-209ENST00000495835 ZEB1P37275 1124 aaPredicted RBP32.08■■■□□ 2.73
HLA-C-209ENST00000495835 DDR1Q08345 913 aa32.08■■■□□ 2.73
HLA-C-209ENST00000495835 NFE2L2Q16236 605 aa32.08■■■□□ 2.73
HLA-C-209ENST00000495835 MAPK8IP3Q9UPT6 1336 aa32.07■■■□□ 2.72
HLA-C-209ENST00000495835 SNRPA1P09661 255 aaKnown RBP32.07■■■□□ 2.72
HLA-C-209ENST00000495835 DCTN1Q14203 1278 aa32.07■■■□□ 2.72
HLA-C-209ENST00000495835 PNISRQ8TF01 805 aaKnown RBP32.07■■■□□ 2.72
HLA-C-209ENST00000495835 N4BP2Q86UW6 1770 aaPredicted RBP32.07■■■□□ 2.72
HLA-C-209ENST00000495835 NPM2Q86SE8 214 aaKnown RBP32.05■■■□□ 2.72
HLA-C-209ENST00000495835 BCL2L12Q9HB09 334 aa32.05■■■□□ 2.72
HLA-C-209ENST00000495835 A0A0G2JLW4 131 aa32.04■■■□□ 2.72
HLA-C-209ENST00000495835 NFIXQ14938 502 aa32.03■■■□□ 2.72
HLA-C-209ENST00000495835 DPEP1P16444 411 aa32.02■■■□□ 2.72
HLA-C-209ENST00000495835 USP16Q9Y5T5 823 aa32.02■■■□□ 2.72
HLA-C-209ENST00000495835 BRCA1P38398 1863 aaKnown RBP32.01■■■□□ 2.72
HLA-C-209ENST00000495835 NRXN2Q9P2S2 1712 aa32.01■■■□□ 2.72
HLA-C-209ENST00000495835 A1BGP04217 495 aa32.01■■■□□ 2.71
HLA-C-209ENST00000495835 AFDNP55196 1824 aaKnown RBP32■■■□□ 2.71
HLA-C-209ENST00000495835 KCNA3P22001 575 aa31.99■■■□□ 2.71
HLA-C-209ENST00000495835 PIM2Q9P1W9 311 aa31.98■■■□□ 2.71
HLA-C-209ENST00000495835 SCN7AQ01118 1682 aa31.97■■■□□ 2.71
HLA-C-209ENST00000495835 SERPINB2P05120 415 aa31.97■■■□□ 2.71
HLA-C-209ENST00000495835 BCS1LQ9Y276 419 aa31.97■■■□□ 2.71
HLA-C-209ENST00000495835 WWC3Q9ULE0 1092 aa31.96■■■□□ 2.71
HLA-C-209ENST00000495835 TBC1D2BQ9UPU7 963 aa31.96■■■□□ 2.71
HLA-C-209ENST00000495835 KDM3BQ7LBC6 1761 aa31.96■■■□□ 2.71
HLA-C-209ENST00000495835 PRKRIP1Q9H875 184 aaPredicted RBP31.95■■■□□ 2.71
HLA-C-209ENST00000495835 ZNF330Q9Y3S2 320 aaPredicted RBP31.95■■■□□ 2.71
HLA-C-209ENST00000495835 ARFGEF1Q9Y6D6 1849 aa31.94■■■□□ 2.7
HLA-C-209ENST00000495835 RGL2O15211 777 aa31.94■■■□□ 2.7
HLA-C-209ENST00000495835 PRAMEF22A3QJZ6 481 aa31.93■■■□□ 2.7
HLA-C-209ENST00000495835 LMOD3Q0VAK6 560 aa31.93■■■□□ 2.7
HLA-C-209ENST00000495835 CAMTA2O94983 1202 aa31.92■■■□□ 2.7
HLA-C-209ENST00000495835 RIPK4P57078 832 aa31.92■■■□□ 2.7
HLA-C-209ENST00000495835 CLEC4GQ6UXB4 293 aa31.92■■■□□ 2.7
HLA-C-209ENST00000495835 DZIP3Q86Y13 1208 aaKnown RBP31.92■■■□□ 2.7
HLA-C-209ENST00000495835 BABAM1Q9NWV8 329 aa31.92■■■□□ 2.7
HLA-C-209ENST00000495835 MIS18AQ9NYP9 233 aa31.92■■■□□ 2.7
HLA-C-209ENST00000495835 DALRD3Q5D0E6 543 aaKnown RBP31.91■■■□□ 2.7
HLA-C-209ENST00000495835 TBC1D9BQ66K14 1250 aa31.91■■■□□ 2.7
HLA-C-209ENST00000495835 ADCY9O60503 1353 aa31.91■■■□□ 2.7
HLA-C-209ENST00000495835 LAMB4A4D0S4 1761 aa31.9■■■□□ 2.7
HLA-C-209ENST00000495835 TMPOP42166 694 aaKnown RBP31.9■■■□□ 2.7
HLA-C-209ENST00000495835 EIF4A1P60842 406 aaKnown RBP31.9■■■□□ 2.7
HLA-C-209ENST00000495835 WDR43Q15061 677 aaKnown RBP eCLIP31.9■■■□□ 2.7
HLA-C-209ENST00000495835 PDZRN3Q9UPQ7 1066 aa31.9■■■□□ 2.7
HLA-C-209ENST00000495835 BCORQ6W2J9 1755 aa31.89■■■□□ 2.7
HLA-C-209ENST00000495835 GIGYF1O75420 1035 aaPredicted RBP31.89■■■□□ 2.7
HLA-C-209ENST00000495835 CARMIL3Q8ND23 1372 aa31.89■■■□□ 2.7
HLA-C-209ENST00000495835 BICDL1Q6ZP65 573 aa31.88■■■□□ 2.69
HLA-C-209ENST00000495835 SETDB2Q96T68 719 aa31.88■■■□□ 2.69
HLA-C-209ENST00000495835 RUNDC1Q96C34 613 aa31.87■■■□□ 2.69
HLA-C-209ENST00000495835 THUMPD2Q9BTF0 503 aaKnown RBP31.87■■■□□ 2.69
HLA-C-209ENST00000495835 ZNF652Q9Y2D9 606 aa31.87■■■□□ 2.69
HLA-C-209ENST00000495835 ATP10DQ9P241 1426 aa31.86■■■□□ 2.69
HLA-C-209ENST00000495835 NBPF26B4DH59 902 aa31.86■■■□□ 2.69
HLA-C-209ENST00000495835 CHRNA5P30532 468 aa31.86■■■□□ 2.69
HLA-C-209ENST00000495835 NBPF10Q6P3W6 841 aaKnown RBP31.86■■■□□ 2.69
HLA-C-209ENST00000495835 NBPF15Q8N660 670 aa31.86■■■□□ 2.69
HLA-C-209ENST00000495835 ARHGAP27Q6ZUM4 889 aa31.85■■■□□ 2.69
HLA-C-209ENST00000495835 DLEC1Q9Y238 1755 aa31.84■■■□□ 2.69
HLA-C-209ENST00000495835 BRIP1Q9BX63 1249 aa31.84■■■□□ 2.69
HLA-C-209ENST00000495835 PIP4K2AP48426 406 aaPredicted RBP31.83■■■□□ 2.69
HLA-C-209ENST00000495835 H0YIN7 160 aa31.82■■■□□ 2.68
HLA-C-209ENST00000495835 PDE6BP35913 854 aa31.82■■■□□ 2.68
HLA-C-209ENST00000495835 ADAMTS8Q9UP79 889 aa31.82■■■□□ 2.68
HLA-C-209ENST00000495835 PRR5LQ6MZQ0 368 aa31.81■■■□□ 2.68
HLA-C-209ENST00000495835 TSPYL4Q9UJ04 414 aa31.81■■■□□ 2.68
HLA-C-209ENST00000495835 ERBB4Q15303 1308 aa31.79■■■□□ 2.68
HLA-C-209ENST00000495835 C2CD5Q86YS7 1000 aa31.79■■■□□ 2.68
HLA-C-209ENST00000495835 GPBP1L1Q9HC44 474 aaPredicted RBP31.79■■■□□ 2.68
HLA-C-209ENST00000495835 CCDC146Q8IYE0 955 aa31.78■■■□□ 2.68
HLA-C-209ENST00000495835 TTLL6Q8N841 843 aa31.78■■■□□ 2.68
HLA-C-209ENST00000495835 CNBD1Q8NA66 436 aa31.78■■■□□ 2.68
HLA-C-209ENST00000495835 C1QTNF8P60827 252 aa31.77■■■□□ 2.68
HLA-C-209ENST00000495835 ANKRD31Q8N7Z5 1873 aa31.77■■■□□ 2.68
HLA-C-209ENST00000495835 ERVV-1B6SEH8 477 aa31.76■■■□□ 2.67
HLA-C-209ENST00000495835 ST5P78524 1137 aa31.76■■■□□ 2.67
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms