RNA–Protein interactions for RNA: ENST00000495122.1

CBX4-204, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 490 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-204ENST00000495122 KDM6AO15550 1401 aaPredicted RBP20.77■□□□□ 0.91
CBX4-204ENST00000495122 ADAMTS7Q9UKP4 1686 aa20.77■□□□□ 0.91
CBX4-204ENST00000495122 UTRNP46939 3433 aa20.76■□□□□ 0.91
CBX4-204ENST00000495122 KIF13BQ9NQT8 1826 aa20.76■□□□□ 0.91
CBX4-204ENST00000495122 YY1P25490 414 aa20.76■□□□□ 0.91
CBX4-204ENST00000495122 POLD1P28340 1107 aa20.76■□□□□ 0.91
CBX4-204ENST00000495122 SMC4Q9NTJ3 1288 aa20.76■□□□□ 0.91
CBX4-204ENST00000495122 HMGB2P26583 209 aaKnown RBP20.75■□□□□ 0.91
CBX4-204ENST00000495122 TMOD3Q9NYL9 352 aa20.75■□□□□ 0.91
CBX4-204ENST00000495122 AEBP1Q8IUX7 1158 aa20.74■□□□□ 0.91
CBX4-204ENST00000495122 CLUAP1Q96AJ1 413 aa20.74■□□□□ 0.91
CBX4-204ENST00000495122 RBM19Q9Y4C8 960 aaKnown RBP20.74■□□□□ 0.91
CBX4-204ENST00000495122 ARHGAP45Q92619 1136 aa20.73■□□□□ 0.91
CBX4-204ENST00000495122 FRAT1Q92837 279 aaPredicted RBP20.73■□□□□ 0.91
CBX4-204ENST00000495122 DZIP1LQ8IYY4 767 aaKnown RBP20.72■□□□□ 0.91
CBX4-204ENST00000495122 SSH1Q8WYL5 1049 aa20.72■□□□□ 0.91
CBX4-204ENST00000495122 CHMP4BQ9H444 224 aaKnown RBP20.72■□□□□ 0.91
CBX4-204ENST00000495122 GOLGB1Q14789 3259 aaKnown RBP20.72■□□□□ 0.91
CBX4-204ENST00000495122 KIAA1551Q9HCM1 1747 aa20.72■□□□□ 0.91
CBX4-204ENST00000495122 SIPA1L3O60292 1781 aaPredicted RBP20.72■□□□□ 0.91
CBX4-204ENST00000495122 UBR2Q8IWV8 1755 aa20.72■□□□□ 0.91
CBX4-204ENST00000495122 LOC102724428A0A0B4J2F2 783 aa20.71■□□□□ 0.91
CBX4-204ENST00000495122 MSH5O43196 834 aa20.71■□□□□ 0.91
CBX4-204ENST00000495122 SIK1P57059 783 aa20.71■□□□□ 0.91
CBX4-204ENST00000495122 ATF7IPQ6VMQ6 1270 aa20.71■□□□□ 0.91
CBX4-204ENST00000495122 ASAP1Q9ULH1 1129 aa20.71■□□□□ 0.91
CBX4-204ENST00000495122 MVPQ14764 893 aaKnown RBP20.7■□□□□ 0.9
CBX4-204ENST00000495122 PLEKHO1Q53GL0 409 aaPredicted RBP20.7■□□□□ 0.9
CBX4-204ENST00000495122 AMIGO3Q86WK7 504 aa20.7■□□□□ 0.9
CBX4-204ENST00000495122 FTSJ3Q8IY81 847 aaKnown RBP20.7■□□□□ 0.9
CBX4-204ENST00000495122 LINC00116Q8NCU8 138 aa20.7■□□□□ 0.9
CBX4-204ENST00000495122 FLAD1Q8NFF5 587 aa20.7■□□□□ 0.9
CBX4-204ENST00000495122 AK7Q96M32 723 aa20.7■□□□□ 0.9
CBX4-204ENST00000495122 MBIPQ9NS73 344 aa20.7■□□□□ 0.9
CBX4-204ENST00000495122 BABAM1Q9NWV8 329 aa20.7■□□□□ 0.9
CBX4-204ENST00000495122 HSP90AB1P08238 724 aaKnown RBP20.69■□□□□ 0.9
CBX4-204ENST00000495122 AMOTQ4VCS5 1084 aa20.69■□□□□ 0.9
CBX4-204ENST00000495122 ZNF530Q6P9A1 599 aaPredicted RBP20.69■□□□□ 0.9
CBX4-204ENST00000495122 ATG3Q9NT62 314 aa20.69■□□□□ 0.9
CBX4-204ENST00000495122 DDX19BQ9UMR2 479 aa20.69■□□□□ 0.9
CBX4-204ENST00000495122 SOS1Q07889 1333 aaPredicted RBP20.69■□□□□ 0.9
CBX4-204ENST00000495122 BRCA1P38398 1863 aaKnown RBP20.69■□□□□ 0.9
CBX4-204ENST00000495122 ERVV-2B6SEH9 535 aa20.68■□□□□ 0.9
CBX4-204ENST00000495122 CHL1O00533 1208 aa20.68■□□□□ 0.9
CBX4-204ENST00000495122 VAMP4O75379 141 aa20.68■□□□□ 0.9
CBX4-204ENST00000495122 ITPK1Q13572 414 aa20.68■□□□□ 0.9
CBX4-204ENST00000495122 MSL1Q68DK7 614 aa20.68■□□□□ 0.9
CBX4-204ENST00000495122 KLHL34Q8N239 644 aa20.68■□□□□ 0.9
CBX4-204ENST00000495122 PANK1Q8TE04 598 aa20.68■□□□□ 0.9
CBX4-204ENST00000495122 RTF1Q92541 710 aaKnown RBP20.68■□□□□ 0.9
CBX4-204ENST00000495122 DCAF5Q96JK2 942 aa20.68■□□□□ 0.9
CBX4-204ENST00000495122 MRC1P22897 1456 aa20.68■□□□□ 0.9
CBX4-204ENST00000495122 COG6Q9Y2V7 657 aa20.67■□□□□ 0.9
CBX4-204ENST00000495122 N4BP2Q86UW6 1770 aaPredicted RBP20.67■□□□□ 0.9
CBX4-204ENST00000495122 NLGN2Q8NFZ4 835 aa20.66■□□□□ 0.9
CBX4-204ENST00000495122 LAS1LQ9Y4W2 734 aaKnown RBP20.66■□□□□ 0.9
CBX4-204ENST00000495122 SSFA2P28290 1259 aa20.65■□□□□ 0.9
CBX4-204ENST00000495122 TWISTNBQ3B726 338 aaPredicted RBP20.65■□□□□ 0.9
CBX4-204ENST00000495122 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.64■□□□□ 0.89
CBX4-204ENST00000495122 PHF14O94880 888 aa20.64■□□□□ 0.89
CBX4-204ENST00000495122 TRIM27P14373 513 aa20.64■□□□□ 0.89
CBX4-204ENST00000495122 ATP6V1AP38606 617 aa20.64■□□□□ 0.89
CBX4-204ENST00000495122 MTHFSDQ2M296 383 aaKnown RBP20.64■□□□□ 0.89
CBX4-204ENST00000495122 SMIM5Q71RC9 77 aa20.64■□□□□ 0.89
CBX4-204ENST00000495122 THUMPD2Q9BTF0 503 aaKnown RBP20.64■□□□□ 0.89
CBX4-204ENST00000495122 BCL2L13Q9BXK5 485 aa20.64■□□□□ 0.89
CBX4-204ENST00000495122 RLBP1P12271 317 aa20.63■□□□□ 0.89
CBX4-204ENST00000495122 C1orf141Q5JVX7 400 aa20.63■□□□□ 0.89
CBX4-204ENST00000495122 SLC4A9Q96Q91 983 aa20.63■□□□□ 0.89
CBX4-204ENST00000495122 GNAT3A8MTJ3 354 aa20.62■□□□□ 0.89
CBX4-204ENST00000495122 MRPL50Q8N5N7 158 aaKnown RBP20.62■□□□□ 0.89
CBX4-204ENST00000495122 NOB1Q9ULX3 412 aaKnown RBP20.62■□□□□ 0.89
CBX4-204ENST00000495122 GNPATO15228 680 aa20.61■□□□□ 0.89
CBX4-204ENST00000495122 API5Q9BZZ5 524 aaKnown RBP20.61■□□□□ 0.89
CBX4-204ENST00000495122 RWDD1Q9H446 243 aaPredicted RBP20.61■□□□□ 0.89
CBX4-204ENST00000495122 CABP4P57796 275 aa20.6■□□□□ 0.89
CBX4-204ENST00000495122 GPR162Q16538 588 aa20.6■□□□□ 0.89
CBX4-204ENST00000495122 CHMP4AQ9BY43 222 aa20.59■□□□□ 0.89
CBX4-204ENST00000495122 AFDNP55196 1824 aaKnown RBP20.59■□□□□ 0.89
CBX4-204ENST00000495122 KCPQ6ZWJ8 1503 aa20.58■□□□□ 0.89
CBX4-204ENST00000495122 CNTNAP4Q9C0A0 1308 aa20.58■□□□□ 0.89
CBX4-204ENST00000495122 ARFGEF1Q9Y6D6 1849 aa20.58■□□□□ 0.89
CBX4-204ENST00000495122 RBM42Q9BTD8 480 aaKnown RBP20.58■□□□□ 0.89
CBX4-204ENST00000495122 ABCC4O15439 1325 aa20.57■□□□□ 0.88
CBX4-204ENST00000495122 DCTN1Q14203 1278 aa20.57■□□□□ 0.88
CBX4-204ENST00000495122 AKAP4Q5JQC9 854 aa20.57■□□□□ 0.88
CBX4-204ENST00000495122 MCM10Q7L590 875 aa20.57■□□□□ 0.88
CBX4-204ENST00000495122 C8orf58Q8NAV2 365 aa20.57■□□□□ 0.88
CBX4-204ENST00000495122 CD2APQ9Y5K6 639 aa20.57■□□□□ 0.88
CBX4-204ENST00000495122 HDAC1Q13547 482 aaPredicted RBP20.56■□□□□ 0.88
CBX4-204ENST00000495122 TSPYL6Q8N831 410 aa20.56■□□□□ 0.88
CBX4-204ENST00000495122 PTPRCP08575 1304 aa20.55■□□□□ 0.88
CBX4-204ENST00000495122 YBX3P16989 372 aaKnown RBP eCLIP20.55■□□□□ 0.88
CBX4-204ENST00000495122 RC3H1Q5TC82 1133 aaKnown RBP20.55■□□□□ 0.88
CBX4-204ENST00000495122 ITPRIPQ8IWB1 547 aa20.55■□□□□ 0.88
CBX4-204ENST00000495122 ZNF784Q8NCA9 323 aaPredicted RBP20.55■□□□□ 0.88
CBX4-204ENST00000495122 NFATC2IPQ8NCF5 419 aa20.55■□□□□ 0.88
CBX4-204ENST00000495122 CEMIPQ8WUJ3 1361 aa20.55■□□□□ 0.88
CBX4-204ENST00000495122 CACNA1FO60840 1977 aa20.54■□□□□ 0.88
CBX4-204ENST00000495122 TSPYL4Q9UJ04 414 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 109.9 ms