RNA–Protein interactions for RNA: ENST00000494942.5

UBXN11-215, Transcript of UBX domain protein 11, humanhuman

TSL 2

Gene UBXN11, Length 2,325 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-215ENST00000494942 PPP1R42Q7Z4L9 355 aa18.05■□□□□ 0.48
UBXN11-215ENST00000494942 UNC5CLQ8IV45 518 aa18.05■□□□□ 0.48
UBXN11-215ENST00000494942 PHAXQ9H814 394 aaKnown RBP18.05■□□□□ 0.48
UBXN11-215ENST00000494942 KCNA6P17658 529 aa18.04■□□□□ 0.48
UBXN11-215ENST00000494942 HSPA4P34932 840 aa18.04■□□□□ 0.48
UBXN11-215ENST00000494942 PRIM1P49642 420 aaKnown RBP18.04■□□□□ 0.48
UBXN11-215ENST00000494942 HSP90AB4PQ58FF6 505 aa18.04■□□□□ 0.48
UBXN11-215ENST00000494942 LRSAM1Q6UWE0 723 aa18.04■□□□□ 0.48
UBXN11-215ENST00000494942 KIF1BPQ96EK5 621 aa18.04■□□□□ 0.48
UBXN11-215ENST00000494942 RBSNQ9H1K0 784 aa18.04■□□□□ 0.48
UBXN11-215ENST00000494942 IL1RAPL2Q9NP60 686 aa18.04■□□□□ 0.48
UBXN11-215ENST00000494942 MED1Q15648 1581 aaPredicted RBP18.04■□□□□ 0.48
UBXN11-215ENST00000494942 RHPN1Q8TCX5 695 aa18.04■□□□□ 0.48
UBXN11-215ENST00000494942 IP6K1Q92551 441 aa18.04■□□□□ 0.48
UBXN11-215ENST00000494942 EIF4A1P60842 406 aaKnown RBP18.03■□□□□ 0.48
UBXN11-215ENST00000494942 LTN1O94822 1766 aa18.02■□□□□ 0.48
UBXN11-215ENST00000494942 NUTM1Q86Y26 1132 aa18.02■□□□□ 0.48
UBXN11-215ENST00000494942 PI4K2BQ8TCG2 481 aa18.02■□□□□ 0.48
UBXN11-215ENST00000494942 PDLIM2Q96JY6 352 aa18.02■□□□□ 0.48
UBXN11-215ENST00000494942 TMEM63CQ9P1W3 806 aa18.02■□□□□ 0.48
UBXN11-215ENST00000494942 RBM27Q9P2N5 1060 aaKnown RBP18.02■□□□□ 0.48
UBXN11-215ENST00000494942 SRGAP3O43295 1099 aa18.01■□□□□ 0.47
UBXN11-215ENST00000494942 MSNP26038 577 aaKnown RBP18.01■□□□□ 0.47
UBXN11-215ENST00000494942 CNTROBQ8N137 903 aa18.01■□□□□ 0.47
UBXN11-215ENST00000494942 DNAAF4Q8WXU2 420 aa18.01■□□□□ 0.47
UBXN11-215ENST00000494942 SYAP1Q96A49 352 aaPredicted RBP18.01■□□□□ 0.47
UBXN11-215ENST00000494942 KDM3BQ7LBC6 1761 aa18.01■□□□□ 0.47
UBXN11-215ENST00000494942 RAD50Q92878 1312 aa18■□□□□ 0.47
UBXN11-215ENST00000494942 WDR33Q9C0J8 1336 aaKnown RBP18■□□□□ 0.47
UBXN11-215ENST00000494942 SGSM2O43147 1006 aa18■□□□□ 0.47
UBXN11-215ENST00000494942 PLEKHG5O94827 1062 aa18■□□□□ 0.47
UBXN11-215ENST00000494942 BEND3Q5T5X7 828 aa18■□□□□ 0.47
UBXN11-215ENST00000494942 USHBP1Q8N6Y0 703 aa18■□□□□ 0.47
UBXN11-215ENST00000494942 UPF3BQ9BZI7 483 aaKnown RBP18■□□□□ 0.47
UBXN11-215ENST00000494942 PHF8Q9UPP1 1060 aa18■□□□□ 0.47
UBXN11-215ENST00000494942 EIF2S2P20042 333 aaKnown RBP18■□□□□ 0.47
UBXN11-215ENST00000494942 FOXD4L5Q5VV16 416 aaPredicted RBP18■□□□□ 0.47
UBXN11-215ENST00000494942 C14orf37Q86TY3 774 aa18■□□□□ 0.47
UBXN11-215ENST00000494942 FOXD4L4Q8WXT5 416 aaPredicted RBP18■□□□□ 0.47
UBXN11-215ENST00000494942 USP42Q9H9J4 1324 aaKnown RBP17.99■□□□□ 0.47
UBXN11-215ENST00000494942 ADGRL3Q9HAR2 1447 aa17.99■□□□□ 0.47
UBXN11-215ENST00000494942 SYCE3A1L190 88 aa17.99■□□□□ 0.47
UBXN11-215ENST00000494942 CHPF2Q9P2E5 772 aa17.99■□□□□ 0.47
UBXN11-215ENST00000494942 TTC41PQ6P2S7 1318 aa17.98■□□□□ 0.47
UBXN11-215ENST00000494942 NFAT5O94916 1531 aa17.98■□□□□ 0.47
UBXN11-215ENST00000494942 NBPF7P0C2Y1 421 aaPredicted RBP17.98■□□□□ 0.47
UBXN11-215ENST00000494942 NOL8Q76FK4 1167 aaKnown RBP17.98■□□□□ 0.47
UBXN11-215ENST00000494942 PI4KAP2A4QPH2 592 aa17.98■□□□□ 0.47
UBXN11-215ENST00000494942 AKAP4Q5JQC9 854 aa17.98■□□□□ 0.47
UBXN11-215ENST00000494942 NBPF6Q5VWK0 638 aa17.98■□□□□ 0.47
UBXN11-215ENST00000494942 KIAA1211Q6ZU35 1233 aa17.98■□□□□ 0.47
UBXN11-215ENST00000494942 PI4KAP1Q8N8J0 262 aa17.98■□□□□ 0.47
UBXN11-215ENST00000494942 KCNH5Q8NCM2 988 aa17.98■□□□□ 0.47
UBXN11-215ENST00000494942 NBPF4Q96M43 638 aa17.98■□□□□ 0.47
UBXN11-215ENST00000494942 IL25Q9H293 177 aa17.98■□□□□ 0.47
UBXN11-215ENST00000494942 NSFL1CQ9UNZ2 370 aaKnown RBP17.98■□□□□ 0.47
UBXN11-215ENST00000494942 CHAMP1Q96JM3 812 aa17.97■□□□□ 0.47
UBXN11-215ENST00000494942 LGR6Q9HBX8 967 aa17.97■□□□□ 0.47
UBXN11-215ENST00000494942 HDAC5Q9UQL6 1122 aa17.97■□□□□ 0.47
UBXN11-215ENST00000494942 LMO7Q8WWI1 1683 aa17.97■□□□□ 0.47
UBXN11-215ENST00000494942 PHF14O94880 888 aa17.97■□□□□ 0.47
UBXN11-215ENST00000494942 TEFQ10587 303 aa17.97■□□□□ 0.47
UBXN11-215ENST00000494942 MTX1Q13505 466 aa17.97■□□□□ 0.47
UBXN11-215ENST00000494942 NOL7Q9UMY1 257 aaKnown RBP17.97■□□□□ 0.47
UBXN11-215ENST00000494942 CHD2O14647 1828 aaKnown RBP17.96■□□□□ 0.47
UBXN11-215ENST00000494942 CRYBG1Q9Y4K1 1723 aa17.96■□□□□ 0.47
UBXN11-215ENST00000494942 GLRX3O76003 335 aaKnown RBP17.96■□□□□ 0.47
UBXN11-215ENST00000494942 LSG1Q9H089 658 aaKnown RBP17.96■□□□□ 0.47
UBXN11-215ENST00000494942 SNX14Q9Y5W7 946 aa17.96■□□□□ 0.47
UBXN11-215ENST00000494942 PHRF1Q9P1Y6 1649 aaKnown RBP17.96■□□□□ 0.47
UBXN11-215ENST00000494942 BTBD11A6QL63 1104 aa17.95■□□□□ 0.46
UBXN11-215ENST00000494942 TPM2P07951 284 aa17.95■□□□□ 0.46
UBXN11-215ENST00000494942 PLEKHO1Q53GL0 409 aaPredicted RBP17.95■□□□□ 0.46
UBXN11-215ENST00000494942 DBF4Q9UBU7 674 aaPredicted RBP17.95■□□□□ 0.46
UBXN11-215ENST00000494942 MAP4K4O95819 1239 aaPredicted RBP17.95■□□□□ 0.46
UBXN11-215ENST00000494942 RUFY2Q8WXA3 655 aa17.95■□□□□ 0.46
UBXN11-215ENST00000494942 OFD1O75665 1012 aa17.94■□□□□ 0.46
UBXN11-215ENST00000494942 AMOTQ4VCS5 1084 aa17.94■□□□□ 0.46
UBXN11-215ENST00000494942 TTC14Q96N46 770 aa17.94■□□□□ 0.46
UBXN11-215ENST00000494942 STRCP1A6NGW2 1772 aa17.94■□□□□ 0.46
UBXN11-215ENST00000494942 ADCY9O60503 1353 aa17.94■□□□□ 0.46
UBXN11-215ENST00000494942 NCAPD2Q15021 1401 aa17.94■□□□□ 0.46
UBXN11-215ENST00000494942 ALDH1L1O75891 902 aa17.94■□□□□ 0.46
UBXN11-215ENST00000494942 MCM5P33992 734 aa17.94■□□□□ 0.46
UBXN11-215ENST00000494942 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.94■□□□□ 0.46
UBXN11-215ENST00000494942 LIMCH1Q9UPQ0 1083 aa17.94■□□□□ 0.46
UBXN11-215ENST00000494942 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.94■□□□□ 0.46
UBXN11-215ENST00000494942 OVOS2A0A0G2JMS6 1433 aa17.93■□□□□ 0.46
UBXN11-215ENST00000494942 OS9Q13438 667 aaPredicted RBP17.93■□□□□ 0.46
UBXN11-215ENST00000494942 ZNF530Q6P9A1 599 aaPredicted RBP17.93■□□□□ 0.46
UBXN11-215ENST00000494942 ERC1Q8IUD2 1116 aa17.93■□□□□ 0.46
UBXN11-215ENST00000494942 CLASRPQ8N2M8 674 aaKnown RBP17.93■□□□□ 0.46
UBXN11-215ENST00000494942 TMEM87AQ8NBN3 555 aa17.93■□□□□ 0.46
UBXN11-215ENST00000494942 TSPY26PQ9H489 355 aa17.93■□□□□ 0.46
UBXN11-215ENST00000494942 GPATCH3Q96I76 525 aa17.93■□□□□ 0.46
UBXN11-215ENST00000494942 ZNF500O60304 480 aaPredicted RBP17.92■□□□□ 0.46
UBXN11-215ENST00000494942 ZNF335Q9H4Z2 1342 aaPredicted RBP17.92■□□□□ 0.46
UBXN11-215ENST00000494942 PSME1Q06323 249 aa17.92■□□□□ 0.46
UBXN11-215ENST00000494942 CWC27Q6UX04 472 aaKnown RBP17.92■□□□□ 0.46
UBXN11-215ENST00000494942 USP48Q86UV5 1035 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms