RNA–Protein interactions for RNA: ENST00000494764.1

RAPGEF3-213, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 5

Gene RAPGEF3, Length 783 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-213ENST00000494764 ARFGEF1Q9Y6D6 1849 aa15.71■□□□□ 0.11
RAPGEF3-213ENST00000494764 TOMM70O94826 608 aa15.71■□□□□ 0.11
RAPGEF3-213ENST00000494764 CANXP27824 592 aaKnown RBP15.71■□□□□ 0.11
RAPGEF3-213ENST00000494764 STARD3NLO95772 234 aa15.7■□□□□ 0.1
RAPGEF3-213ENST00000494764 TEFQ10587 303 aa15.7■□□□□ 0.1
RAPGEF3-213ENST00000494764 ZBTB1Q9Y2K1 713 aa15.7■□□□□ 0.1
RAPGEF3-213ENST00000494764 GNAT3A8MTJ3 354 aa15.69■□□□□ 0.1
RAPGEF3-213ENST00000494764 SERPINB2P05120 415 aa15.69■□□□□ 0.1
RAPGEF3-213ENST00000494764 NFIXQ14938 502 aa15.69■□□□□ 0.1
RAPGEF3-213ENST00000494764 C16orf71Q8IYS4 520 aaPredicted RBP15.69■□□□□ 0.1
RAPGEF3-213ENST00000494764 GAS2L2Q8NHY3 880 aa15.69■□□□□ 0.1
RAPGEF3-213ENST00000494764 NMRK2Q9NPI5 230 aa15.69■□□□□ 0.1
RAPGEF3-213ENST00000494764 COL15A1P39059 1388 aa15.68■□□□□ 0.1
RAPGEF3-213ENST00000494764 A0A087WZG4 1122 aa15.68■□□□□ 0.1
RAPGEF3-213ENST00000494764 TEX13AQ9BXU3 409 aaPredicted RBP15.68■□□□□ 0.1
RAPGEF3-213ENST00000494764 RNF181Q9P0P0 153 aa15.68■□□□□ 0.1
RAPGEF3-213ENST00000494764 APLP1P51693 650 aa15.67■□□□□ 0.1
RAPGEF3-213ENST00000494764 IL17REQ8NFR9 667 aa15.67■□□□□ 0.1
RAPGEF3-213ENST00000494764 KDM2BQ8NHM5 1336 aa15.67■□□□□ 0.1
RAPGEF3-213ENST00000494764 ADAMTS7Q9UKP4 1686 aa15.67■□□□□ 0.1
RAPGEF3-213ENST00000494764 AFDNP55196 1824 aaKnown RBP15.66■□□□□ 0.1
RAPGEF3-213ENST00000494764 MRC1P22897 1456 aa15.66■□□□□ 0.1
RAPGEF3-213ENST00000494764 ZNF790Q6PG37 636 aa15.66■□□□□ 0.1
RAPGEF3-213ENST00000494764 BICDL1Q6ZP65 573 aa15.66■□□□□ 0.1
RAPGEF3-213ENST00000494764 NPM2Q86SE8 214 aaKnown RBP15.66■□□□□ 0.1
RAPGEF3-213ENST00000494764 BCL2L12Q9HB09 334 aa15.66■□□□□ 0.1
RAPGEF3-213ENST00000494764 KCPQ6ZWJ8 1503 aa15.66■□□□□ 0.1
RAPGEF3-213ENST00000494764 SBF1O95248 1867 aa15.65■□□□□ 0.1
RAPGEF3-213ENST00000494764 NPC1L1Q9UHC9 1359 aa15.65■□□□□ 0.1
RAPGEF3-213ENST00000494764 H0YIN7 160 aa15.65■□□□□ 0.1
RAPGEF3-213ENST00000494764 EIF5P55010 431 aaKnown RBP15.65■□□□□ 0.1
RAPGEF3-213ENST00000494764 ZNF496Q96IT1 587 aaPredicted RBP15.65■□□□□ 0.1
RAPGEF3-213ENST00000494764 CFAP53Q96M91 514 aa15.65■□□□□ 0.1
RAPGEF3-213ENST00000494764 RRAGCQ9HB90 399 aa15.65■□□□□ 0.1
RAPGEF3-213ENST00000494764 IFFO2Q5TF58 517 aa15.64■□□□□ 0.09
RAPGEF3-213ENST00000494764 C2CD5Q86YS7 1000 aa15.64■□□□□ 0.09
RAPGEF3-213ENST00000494764 TTLL6Q8N841 843 aa15.64■□□□□ 0.09
RAPGEF3-213ENST00000494764 ZNF330Q9Y3S2 320 aaPredicted RBP15.64■□□□□ 0.09
RAPGEF3-213ENST00000494764 RBM46Q8TBY0 533 aaKnown RBP15.63■□□□□ 0.09
RAPGEF3-213ENST00000494764 FMNL2Q96PY5 1086 aa15.63■□□□□ 0.09
RAPGEF3-213ENST00000494764 TBC1D2BQ9UPU7 963 aa15.63■□□□□ 0.09
RAPGEF3-213ENST00000494764 NUDCQ9Y266 331 aa15.63■□□□□ 0.09
RAPGEF3-213ENST00000494764 HEG1Q9ULI3 1381 aa15.62■□□□□ 0.09
RAPGEF3-213ENST00000494764 UBR2Q8IWV8 1755 aa15.62■□□□□ 0.09
RAPGEF3-213ENST00000494764 BTBD11A6QL63 1104 aa15.62■□□□□ 0.09
RAPGEF3-213ENST00000494764 PHACTR3Q96KR7 559 aa15.62■□□□□ 0.09
RAPGEF3-213ENST00000494764 LMNB1P20700 586 aa15.61■□□□□ 0.09
RAPGEF3-213ENST00000494764 PRKAR2BP31323 418 aa15.61■□□□□ 0.09
RAPGEF3-213ENST00000494764 IL6STP40189 918 aaPredicted RBP15.61■□□□□ 0.09
RAPGEF3-213ENST00000494764 TBC1D9BQ66K14 1250 aa15.61■□□□□ 0.09
RAPGEF3-213ENST00000494764 ZNF622Q969S3 477 aaKnown RBP eCLIP15.61■□□□□ 0.09
RAPGEF3-213ENST00000494764 NRXN2Q9P2S2 1712 aa15.6■□□□□ 0.09
RAPGEF3-213ENST00000494764 A1BGP04217 495 aa15.6■□□□□ 0.09
RAPGEF3-213ENST00000494764 PDE6BP35913 854 aa15.6■□□□□ 0.09
RAPGEF3-213ENST00000494764 RASSF7Q02833 373 aa15.6■□□□□ 0.09
RAPGEF3-213ENST00000494764 FSTL1Q12841 308 aa15.6■□□□□ 0.09
RAPGEF3-213ENST00000494764 DNAJC5GQ8N7S2 189 aa15.6■□□□□ 0.09
RAPGEF3-213ENST00000494764 RTF1Q92541 710 aaKnown RBP15.6■□□□□ 0.09
RAPGEF3-213ENST00000494764 PDZRN3Q9UPQ7 1066 aa15.6■□□□□ 0.09
RAPGEF3-213ENST00000494764 CCDC88AQ3V6T2 1871 aa15.6■□□□□ 0.09
RAPGEF3-213ENST00000494764 COL3A1P02461 1466 aaPredicted RBP15.59■□□□□ 0.09
RAPGEF3-213ENST00000494764 NPHP1O15259 732 aa15.59■□□□□ 0.09
RAPGEF3-213ENST00000494764 SETDB2Q96T68 719 aa15.59■□□□□ 0.09
RAPGEF3-213ENST00000494764 BRIP1Q9BX63 1249 aa15.59■□□□□ 0.09
RAPGEF3-213ENST00000494764 KCNQ3O43525 872 aa15.58■□□□□ 0.08
RAPGEF3-213ENST00000494764 U2AF1L5P0DN76 240 aaPredicted RBP15.58■□□□□ 0.08
RAPGEF3-213ENST00000494764 U2AF1Q01081 240 aaKnown RBP eCLIP15.58■□□□□ 0.08
RAPGEF3-213ENST00000494764 RSPH6AQ9H0K4 717 aa15.58■□□□□ 0.08
RAPGEF3-213ENST00000494764 ZC3H4Q9UPT8 1303 aaKnown RBP15.58■□□□□ 0.08
RAPGEF3-213ENST00000494764 SIPA1L3O60292 1781 aaPredicted RBP15.57■□□□□ 0.08
RAPGEF3-213ENST00000494764 GLTPD2A6NH11 291 aa15.57■□□□□ 0.08
RAPGEF3-213ENST00000494764 PRR5LQ6MZQ0 368 aa15.57■□□□□ 0.08
RAPGEF3-213ENST00000494764 CCDC24Q8N4L8 307 aa15.57■□□□□ 0.08
RAPGEF3-213ENST00000494764 ZNF219Q9P2Y4 722 aaPredicted RBP15.57■□□□□ 0.08
RAPGEF3-213ENST00000494764 USP16Q9Y5T5 823 aa15.57■□□□□ 0.08
RAPGEF3-213ENST00000494764 VEGFAP15692 232 aaPredicted RBP15.56■□□□□ 0.08
RAPGEF3-213ENST00000494764 DPY19L2Q6NUT2 758 aa15.56■□□□□ 0.08
RAPGEF3-213ENST00000494764 DZIP3Q86Y13 1208 aaKnown RBP15.56■□□□□ 0.08
RAPGEF3-213ENST00000494764 CARMIL3Q8ND23 1372 aa15.56■□□□□ 0.08
RAPGEF3-213ENST00000494764 CEMIPQ8WUJ3 1361 aa15.56■□□□□ 0.08
RAPGEF3-213ENST00000494764 DLEC1Q9Y238 1755 aa15.56■□□□□ 0.08
RAPGEF3-213ENST00000494764 C21orf2O43822 256 aa15.55■□□□□ 0.08
RAPGEF3-213ENST00000494764 CAMTA2O94983 1202 aa15.55■□□□□ 0.08
RAPGEF3-213ENST00000494764 PPP2R1AP30153 589 aa15.55■□□□□ 0.08
RAPGEF3-213ENST00000494764 ST5P78524 1137 aa15.55■□□□□ 0.08
RAPGEF3-213ENST00000494764 MCM10Q7L590 875 aa15.55■□□□□ 0.08
RAPGEF3-213ENST00000494764 SMC1BQ8NDV3 1235 aa15.55■□□□□ 0.08
RAPGEF3-213ENST00000494764 NFKBIEO00221 500 aa15.54■□□□□ 0.08
RAPGEF3-213ENST00000494764 SNRPA1P09661 255 aaKnown RBP15.54■□□□□ 0.08
RAPGEF3-213ENST00000494764 PRELPP51888 382 aa15.54■□□□□ 0.08
RAPGEF3-213ENST00000494764 HTRA3P83110 453 aa15.54■□□□□ 0.08
RAPGEF3-213ENST00000494764 CNBD1Q8NA66 436 aa15.54■□□□□ 0.08
RAPGEF3-213ENST00000494764 TNRC6CQ9HCJ0 1690 aaKnown RBP15.54■□□□□ 0.08
RAPGEF3-213ENST00000494764 HTATSF1O43719 755 aaKnown RBP15.53■□□□□ 0.08
RAPGEF3-213ENST00000494764 PIP4K2AP48426 406 aaPredicted RBP15.53■□□□□ 0.08
RAPGEF3-213ENST00000494764 CLEC4GQ6UXB4 293 aa15.53■□□□□ 0.08
RAPGEF3-213ENST00000494764 CNKSR1Q969H4 720 aa15.53■□□□□ 0.08
RAPGEF3-213ENST00000494764 ANKRD31Q8N7Z5 1873 aa15.52■□□□□ 0.08
RAPGEF3-213ENST00000494764 WDR90Q96KV7 1748 aa15.52■□□□□ 0.08
RAPGEF3-213ENST00000494764 PRAMEF22A3QJZ6 481 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms