RNA–Protein interactions for RNA: ENST00000494571.1

ATG3-207, Transcript of autophagy related 3, humanhuman

TSL 2

Gene ATG3, Length 2,758 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-207ENST00000494571 KRTAP3-2Q9BYR7 98 aa4.78□□□□□ -1.64
ATG3-207ENST00000494571 RWDD1Q9H446 243 aaPredicted RBP4.78□□□□□ -1.64
ATG3-207ENST00000494571 ADAMTS8Q9UP79 889 aa4.78□□□□□ -1.64
ATG3-207ENST00000494571 PAXBP1Q9Y5B6 917 aa4.78□□□□□ -1.64
ATG3-207ENST00000494571 PTPRCP08575 1304 aa4.77□□□□□ -1.65
ATG3-207ENST00000494571 MBD3O95983 291 aa4.77□□□□□ -1.65
ATG3-207ENST00000494571 LIG3P49916 1009 aa4.77□□□□□ -1.65
ATG3-207ENST00000494571 ZRSR1Q15695 479 aaKnown RBP4.77□□□□□ -1.65
ATG3-207ENST00000494571 ARHGAP29Q52LW3 1261 aa4.77□□□□□ -1.65
ATG3-207ENST00000494571 ISM2Q6H9L7 571 aa4.77□□□□□ -1.65
ATG3-207ENST00000494571 CPLX2Q6PUV4 134 aaKnown RBP4.77□□□□□ -1.65
ATG3-207ENST00000494571 KIRREL3Q8IZU9 778 aa4.77□□□□□ -1.65
ATG3-207ENST00000494571 KIF2CQ99661 725 aa4.77□□□□□ -1.65
ATG3-207ENST00000494571 NBPF3Q9H094 633 aa4.77□□□□□ -1.65
ATG3-207ENST00000494571 PREX1Q8TCU6 1659 aa4.77□□□□□ -1.65
ATG3-207ENST00000494571 CCDC18Q5T9S5 1454 aa4.77□□□□□ -1.65
ATG3-207ENST00000494571 ABCA9Q8IUA7 1624 aa4.77□□□□□ -1.65
ATG3-207ENST00000494571 KIF3CO14782 793 aa4.77□□□□□ -1.65
ATG3-207ENST00000494571 SMARCA5O60264 1052 aaPredicted RBP4.77□□□□□ -1.65
ATG3-207ENST00000494571 KDM4AO75164 1064 aa4.77□□□□□ -1.65
ATG3-207ENST00000494571 SNX1Q13596 522 aa4.77□□□□□ -1.65
ATG3-207ENST00000494571 SWT1Q5T5J6 900 aaKnown RBP4.77□□□□□ -1.65
ATG3-207ENST00000494571 ANKRD45Q5TZF3 282 aa4.77□□□□□ -1.65
ATG3-207ENST00000494571 JAKMIP3Q5VZ66 844 aa4.77□□□□□ -1.65
ATG3-207ENST00000494571 NFXL1Q6ZNB6 911 aa4.77□□□□□ -1.65
ATG3-207ENST00000494571 NRBP1Q9UHY1 535 aa4.77□□□□□ -1.65
ATG3-207ENST00000494571 PRG4Q92954 1404 aaPredicted RBP4.77□□□□□ -1.65
ATG3-207ENST00000494571 RAD54L2Q9Y4B4 1467 aa4.77□□□□□ -1.65
ATG3-207ENST00000494571 EME2A4GXA9 379 aaPredicted RBP4.76□□□□□ -1.65
ATG3-207ENST00000494571 TPD52L2O43399 206 aaKnown RBP4.76□□□□□ -1.65
ATG3-207ENST00000494571 GADD45BO75293 160 aaPredicted RBP4.76□□□□□ -1.65
ATG3-207ENST00000494571 ACTN2P35609 894 aa4.76□□□□□ -1.65
ATG3-207ENST00000494571 RABEP1Q15276 862 aa4.76□□□□□ -1.65
ATG3-207ENST00000494571 FBXW10Q5XX13 1052 aa4.76□□□□□ -1.65
ATG3-207ENST00000494571 SUGP1Q8IWZ8 645 aaKnown RBP4.76□□□□□ -1.65
ATG3-207ENST00000494571 ARL10Q8N8L6 244 aa4.76□□□□□ -1.65
ATG3-207ENST00000494571 LRRN4CLQ8ND94 238 aa4.76□□□□□ -1.65
ATG3-207ENST00000494571 MIEF2Q96C03 454 aa4.76□□□□□ -1.65
ATG3-207ENST00000494571 FAXDC2Q96IV6 333 aa4.76□□□□□ -1.65
ATG3-207ENST00000494571 CEP89Q96ST8 783 aa4.76□□□□□ -1.65
ATG3-207ENST00000494571 GOPCQ9HD26 462 aa4.76□□□□□ -1.65
ATG3-207ENST00000494571 ETAA1Q9NY74 926 aa4.76□□□□□ -1.65
ATG3-207ENST00000494571 CTAGE5O15320 804 aa4.76□□□□□ -1.65
ATG3-207ENST00000494571 AP5Z1O43299 807 aa4.76□□□□□ -1.65
ATG3-207ENST00000494571 SLU7O95391 586 aaKnown RBP4.76□□□□□ -1.65
ATG3-207ENST00000494571 NF2P35240 595 aa4.76□□□□□ -1.65
ATG3-207ENST00000494571 GCKP35557 465 aa4.76□□□□□ -1.65
ATG3-207ENST00000494571 CCNHP51946 323 aaPredicted RBP4.76□□□□□ -1.65
ATG3-207ENST00000494571 TRDNQ13061 729 aa4.76□□□□□ -1.65
ATG3-207ENST00000494571 PTPN14Q15678 1187 aa4.76□□□□□ -1.65
ATG3-207ENST00000494571 CCDC96Q2M329 555 aa4.76□□□□□ -1.65
ATG3-207ENST00000494571 C1QTNF12Q5T7M4 302 aa4.76□□□□□ -1.65
ATG3-207ENST00000494571 TRIM74Q86UV6 250 aa4.76□□□□□ -1.65
ATG3-207ENST00000494571 TRIM73Q86UV7 250 aa4.76□□□□□ -1.65
ATG3-207ENST00000494571 CADPS2Q86UW7 1296 aa4.76□□□□□ -1.65
ATG3-207ENST00000494571 ERO1AQ96HE7 468 aa4.76□□□□□ -1.65
ATG3-207ENST00000494571 MRFAP1L1Q96HT8 127 aa4.76□□□□□ -1.65
ATG3-207ENST00000494571 PUS7Q96PZ0 661 aaKnown RBP4.76□□□□□ -1.65
ATG3-207ENST00000494571 LNPKQ9C0E8 428 aa4.76□□□□□ -1.65
ATG3-207ENST00000494571 KDM4CQ9H3R0 1056 aa4.76□□□□□ -1.65
ATG3-207ENST00000494571 BSDC1Q9NW68 430 aaPredicted RBP4.76□□□□□ -1.65
ATG3-207ENST00000494571 FAM53CQ9NYF3 392 aa4.76□□□□□ -1.65
ATG3-207ENST00000494571 PLEKHH1Q9ULM0 1364 aa4.76□□□□□ -1.65
ATG3-207ENST00000494571 CARMIL2Q6F5E8 1435 aa4.76□□□□□ -1.65
ATG3-207ENST00000494571 USP27XA6NNY8 438 aa4.76□□□□□ -1.65
ATG3-207ENST00000494571 IVLP07476 585 aa4.76□□□□□ -1.65
ATG3-207ENST00000494571 CASTP20810 708 aaKnown RBP4.76□□□□□ -1.65
ATG3-207ENST00000494571 GNL2Q13823 731 aaKnown RBP4.76□□□□□ -1.65
ATG3-207ENST00000494571 SMC1AQ14683 1233 aaKnown RBP4.76□□□□□ -1.65
ATG3-207ENST00000494571 C11orf91Q3C1V1 193 aa4.76□□□□□ -1.65
ATG3-207ENST00000494571 GIMAP6Q6P9H5 292 aa4.76□□□□□ -1.65
ATG3-207ENST00000494571 TMTC2Q8N394 836 aa4.76□□□□□ -1.65
ATG3-207ENST00000494571 ACRBPQ8NEB7 543 aa4.76□□□□□ -1.65
ATG3-207ENST00000494571 TBC1D22AQ8WUA7 517 aa4.76□□□□□ -1.65
ATG3-207ENST00000494571 TRIM6Q9C030 488 aaPredicted RBP4.76□□□□□ -1.65
ATG3-207ENST00000494571 EPC1Q9H2F5 836 aa4.76□□□□□ -1.65
ATG3-207ENST00000494571 TMEM165Q9HC07 324 aa4.76□□□□□ -1.65
ATG3-207ENST00000494571 VPS18Q9P253 973 aa4.76□□□□□ -1.65
ATG3-207ENST00000494571 ADAM21Q9UKJ8 722 aa4.76□□□□□ -1.65
ATG3-207ENST00000494571 SPAG9O60271 1321 aaKnown RBP4.75□□□□□ -1.65
ATG3-207ENST00000494571 POTEFA5A3E0 1075 aa4.75□□□□□ -1.65
ATG3-207ENST00000494571 KINO60870 393 aaKnown RBP4.75□□□□□ -1.65
ATG3-207ENST00000494571 MYBL2P10244 700 aa4.75□□□□□ -1.65
ATG3-207ENST00000494571 ELF1P32519 619 aa4.75□□□□□ -1.65
ATG3-207ENST00000494571 RDXP35241 583 aaKnown RBP4.75□□□□□ -1.65
ATG3-207ENST00000494571 NEUROD2Q15784 382 aa4.75□□□□□ -1.65
ATG3-207ENST00000494571 IER5LQ5T953 404 aa4.75□□□□□ -1.65
ATG3-207ENST00000494571 TADA2BQ86TJ2 420 aa4.75□□□□□ -1.65
ATG3-207ENST00000494571 CTCFLQ8NI51 663 aaPredicted RBP4.75□□□□□ -1.65
ATG3-207ENST00000494571 PARD3BQ8TEW8 1205 aa4.75□□□□□ -1.65
ATG3-207ENST00000494571 ZNF428Q96B54 188 aa4.75□□□□□ -1.65
ATG3-207ENST00000494571 ZBTB10Q96DT7 871 aa4.75□□□□□ -1.65
ATG3-207ENST00000494571 SUDS3Q9H7L9 328 aaPredicted RBP4.75□□□□□ -1.65
ATG3-207ENST00000494571 VEZTQ9HBM0 779 aa4.75□□□□□ -1.65
ATG3-207ENST00000494571 ARGLU1Q9NWB6 273 aaPredicted RBP4.75□□□□□ -1.65
ATG3-207ENST00000494571 MIS18AQ9NYP9 233 aa4.75□□□□□ -1.65
ATG3-207ENST00000494571 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.75□□□□□ -1.65
ATG3-207ENST00000494571 CHMP3Q9Y3E7 222 aa4.75□□□□□ -1.65
ATG3-207ENST00000494571 MRFAP1Q9Y605 127 aa4.75□□□□□ -1.65
ATG3-207ENST00000494571 USP47Q96K76 1375 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms